Jatropha Genome Database

JcCA0081341.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081341.20 - phase: 0 /pseudo/partial
         (104 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q01AT5_OSTTA (tr|Q01AT5) Chromosome 04 contig 1, DNA sequence OS...   101   3e-20
D0P017_PHYIN (tr|D0P017) Putative uncharacterized protein OS=Phy...    88   3e-16

>Q01AT5_OSTTA (tr|Q01AT5) Chromosome 04 contig 1, DNA sequence OS=Ostreococcus
           tauri GN=Ot04g03150 PE=4 SV=1
          Length = 175

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 11  KLTFCQFFFSSETRKLTLNWTFWKICFSSIPQCPTATPMQRTFLSWNFTIAFVSLTLSSR 70
            LTFCQFFF  ET+KLT  W      FS I   PTAT  QRTFLSWN      SL L SR
Sbjct: 14  DLTFCQFFFKRETKKLTDIWMLMNNSFSVISMWPTATAKQRTFLSWNLIWDLTSLILLSR 73

Query: 71  ES--*WATKNLPALLRPGPKRRGICLMTDSEAKNAW 104
           +S    +  NLPAL +PGPKRRGICL+TDS+A+  W
Sbjct: 74  DSLCVASVGNLPALFKPGPKRRGICLITDSDARKCW 109


>D0P017_PHYIN (tr|D0P017) Putative uncharacterized protein OS=Phytophthora
           infestans T30-4 GN=PITG_18931 PE=4 SV=1
          Length = 190

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 14  FCQFFFSSETRKLTLNWTFWKICFSSIPQCPTATPMQRTFLSWNFTIAFVSLTLSSRES* 73
           FCQFFFSSE RKL  +     IC  S P  P AT    TF  WN  +A  +   S  ES 
Sbjct: 2   FCQFFFSSEARKLAASCVLTTICCLSRPTWPMATLRHMTFFIWNLMVARTASAFSVSESL 61

Query: 74  WATK--NLPALLRPGPKRRGICLMTDSEAKNA 103
             T+  NLPALLRPGP RRGICLM+ SEA+ A
Sbjct: 62  DVTRVGNLPALLRPGPNRRGICLMSVSEARKA 93