Jatropha Genome Database

JcCA0080751.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080751.20 - phase: 0 /partial
         (413 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5C0B1_VITVI (tr|A5C0B1) Putative uncharacterized protein OS=Vit...    87   5e-15

>A5C0B1_VITVI (tr|A5C0B1) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_000588 PE=4 SV=1
          Length = 689

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 164/398 (41%), Gaps = 37/398 (9%)

Query: 7   RSGASATDASAFWDLLDPPMRARVVAAGFGDYAAGLRRTQPHFPPAMRYALMERWNDCTH 66
           ++  S+   + ++D LDP ++ +V  AGFG + + L  +          +L ERW D T 
Sbjct: 56  KTCGSSIALTQWYDKLDPVVKQKVDNAGFGRFISSLCPSS-RAEKVRVISLAERWWDTTG 114

Query: 67  TLVFGFGKMTLTPVDYAAITGLHFTGPVPPLDARYQTVAIGAQLVRSLLGVTTQTRYTVQ 126
           TL F FG++ +TP D++ ITGL   G   P +A              LL         ++
Sbjct: 115 TLHFPFGEVGMTPYDFSVITGLRIGGKPIPYNAGVHRSE------DDLLKALGSRPPVIR 168

Query: 127 GCMSYETVFRFWAERIRTRLEAWRELPEDVRPAAPAYTREERDQAAWSFLFYIISSQLLC 186
           G +S   +F  +   +                     T  +R+    +F+ Y+    +  
Sbjct: 169 GSVSCSWLFENFHNVV-------------------CNTDRDRECHTRAFILYLFGCTMFG 209

Query: 187 TSQNKGDPAVLECLRDLSQVGSFDWATLGLAHLYHGLDVWTHGSGESNWLFIRPLEVWSY 246
           T   K +   L  L D+ ++G +DW     A L   ++  + G         +  E+WSY
Sbjct: 210 TLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHMNSVSRGKAHRLGGLWKVWEIWSY 269

Query: 247 EY--CIYPGGPSGDSPVESRRIPRYLAHCHHTYASGE---DPEYWRSFLNDREVSDLSLT 301
           EY   + P     DS    R + R+               D + +R  +N+  +  ++  
Sbjct: 270 EYFSLLAPSLKVDDSMAFPRSL-RWWGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWN 328

Query: 302 PWDCEAWRTYPG--REVAELHTRSRLLMRGYWVDRYFLGERVFDTPVAPAQRRVPHAPPR 359
           PW  E   T P   R   EL +R R+L  G     +FLGER+    +   Q  VP  PP 
Sbjct: 329 PWG-EIEPTLPPEIRHAKEL-SRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPM 386

Query: 360 HMCLLEGMTGEDLEVEYRGFSANDFLS-VGDFPSYFAS 396
            M L    + E+LE  ++GF A  F+   G++  + AS
Sbjct: 387 SMRLTASFSAEELEGCFKGFPAERFIDHSGNYDDFCAS 424