Jatropha Genome Database
- JcCA0080591.30
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0080591.30 - phase: 0
(267 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RHW1_RICCO (tr|B9RHW1) Putative uncharacterized protein OS=Ric... 193 2e-47
D7T9M6_VITVI (tr|D7T9M6) Whole genome shotgun sequence of line P... 103 2e-20
B9N3S4_POPTR (tr|B9N3S4) Chromatin remodeling complex subunit OS... 99 4e-19
B9SCD7_RICCO (tr|B9SCD7) Chromodomain helicase DNA binding prote... 99 6e-19
B9GVF7_POPTR (tr|B9GVF7) Chromatin remodeling complex subunit OS... 99 6e-19
B9HY32_POPTR (tr|B9HY32) Predicted protein OS=Populus trichocarp... 94 2e-17
Q2HV80_MEDTR (tr|Q2HV80) Homeodomain-like OS=Medicago truncatula... 88 9e-16
D7MLG9_ARALY (tr|D7MLG9) Putative uncharacterized protein OS=Ara... 87 1e-15
C5X990_SORBI (tr|C5X990) Putative uncharacterized protein Sb02g0... 86 5e-15
O48579_ARATH (tr|O48579) Helicase-like protein OS=Arabidopsis th... 85 6e-15
A7LHQ1_BRANA (tr|A7LHQ1) Baby boom-interacting protein 3 (Fragme... 85 9e-15
B9RFT8_RICCO (tr|B9RFT8) Putative uncharacterized protein OS=Ric... 84 2e-14
B9FXD3_ORYSJ (tr|B9FXD3) Putative uncharacterized protein OS=Ory... 82 4e-14
B8B6D8_ORYSI (tr|B8B6D8) Putative uncharacterized protein OS=Ory... 82 4e-14
D7SPU8_VITVI (tr|D7SPU8) Whole genome shotgun sequence of line P... 82 5e-14
A5AN18_VITVI (tr|A5AN18) Putative uncharacterized protein OS=Vit... 82 7e-14
C5XVW5_SORBI (tr|C5XVW5) Putative uncharacterized protein Sb04g0... 77 2e-12
Q6K6A1_ORYSJ (tr|Q6K6A1) Os02g0817000 protein OS=Oryza sativa su... 76 3e-12
B8AEU7_ORYSI (tr|B8AEU7) Putative uncharacterized protein OS=Ory... 74 2e-11
>B9RHW1_RICCO (tr|B9RHW1) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1574050 PE=4 SV=1
Length = 602
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 151/277 (54%), Gaps = 56/277 (20%)
Query: 12 KEEQTSIDQVPSKTLDKV----NCLQRLSGLMDPRRLHYGQSKFGRQLLGFPSHRASGAE 67
KE++TSID++ KT D+ NC Q L DPRR Q+KF G SH+A A
Sbjct: 361 KEKKTSIDKLLYKTSDQFHGHSNCFQNLPITTDPRRW---QTKFVGNYPGCSSHQAD-AG 416
Query: 68 CSTGINLNSQEIGDGDLSLQKLNMSVVPQGGH-----------------VNLMMKMSNAS 110
CS I ++ Q+ + D+SLQ L + G + M +MS
Sbjct: 417 CSPRIGMSYQKSSNPDVSLQMLIPPAISIGENGRPWMNSASNLSSTSQLSGCMTEMSRNL 476
Query: 111 RKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLK 170
RKD+ MVDVWLEEELD LWIGVRRHG GNWE MLRDPSLSFSKHKTIEDLS+RW+KERL+
Sbjct: 477 RKDEAMVDVWLEEELDSLWIGVRRHGPGNWERMLRDPSLSFSKHKTIEDLSQRWKKERLR 536
Query: 171 ILYPGNLPIHGSGNLPSDMFNNSVDYRKKRLKAADSTLPFVEDQLPSCGEKKVQQNLLLG 230
IL PG L F +QLPS + Q NLLLG
Sbjct: 537 ILNPG-------------------------------ILRFPRNQLPSSRGNRAQPNLLLG 565
Query: 231 GLINISMLRRDTEESEKSNQTQQLKAKEFSSEDTISD 267
GLINI+ ++ D E S S Q + + KE SSE TISD
Sbjct: 566 GLINIANVKIDQEVSRNSGQVHRHEGKELSSEGTISD 602
>D7T9M6_VITVI (tr|D7T9M6) Whole genome shotgun sequence of line PN40024,
scaffold_11.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00012117001 PE=4 SV=1
Length = 1638
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Query: 101 NLMMKMSNASR---KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+MM+ + S K + V+ W E+ELDFLWIGVRRHG+GNW+AMLRDP L FSK+KT
Sbjct: 1182 NIMMRTGSGSMNLFKKKSRVEGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKTA 1241
Query: 158 EDLSRRWEKERLKILYPGNLPI 179
+DLS RWE+E+LKIL LP+
Sbjct: 1242 DDLSARWEEEQLKILEGPALPM 1263
>B9N3S4_POPTR (tr|B9N3S4) Chromatin remodeling complex subunit OS=Populus
trichocarpa GN=CHR906 PE=4 SV=1
Length = 2332
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Query: 101 NLMMKMSNASR---KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+MM+ + S + + +DVW E+ELDFLW+GVRR+G+GNW+A+LRDP L FSK+KT
Sbjct: 1788 NIMMRTGSGSSSLYRKKSKIDVWSEDELDFLWVGVRRYGRGNWDAILRDPRLKFSKYKTS 1847
Query: 158 EDLSRRWEKERLKILYPGNLPI 179
EDL+ RWE+E+ K L P+
Sbjct: 1848 EDLAARWEEEQFKFLDGSAFPL 1869
>B9SCD7_RICCO (tr|B9SCD7) Chromodomain helicase DNA binding protein, putative
OS=Ricinus communis GN=RCOM_0893560 PE=4 SV=1
Length = 2257
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Query: 101 NLMMKM---SNASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+MM+ SN + + D W E+ELDFLWIGVRRHG+GNW+AMLRDP L FSK+K+
Sbjct: 1705 NIMMRTGSGSNNLYRKKSRTDGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKSS 1764
Query: 158 EDLSRRWEKERLKILYPGNLP 178
+DL+ RWE+E++KIL LP
Sbjct: 1765 DDLAARWEEEQMKILDGPPLP 1785
>B9GVF7_POPTR (tr|B9GVF7) Chromatin remodeling complex subunit OS=Populus
trichocarpa GN=CHR926 PE=4 SV=1
Length = 2327
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 117 VDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKILYPGN 176
VDVW E+ELDFLW+GVRR+G+GNW+AMLRDP L FSK+KT EDL+ RWE+E+LK L
Sbjct: 1809 VDVWSEDELDFLWVGVRRYGRGNWDAMLRDPRLKFSKYKTSEDLAVRWEEEQLKFLDGSA 1868
Query: 177 LPI 179
P+
Sbjct: 1869 FPL 1871
>B9HY32_POPTR (tr|B9HY32) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_770060 PE=4 SV=1
Length = 549
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 19/118 (16%)
Query: 118 DVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKILYPGNL 177
D W + ELD LW+GVRRHGQGNWEAMLRDP L F K KT+E L++RW KERL+I NL
Sbjct: 411 DAWSDMELDSLWVGVRRHGQGNWEAMLRDP-LLFFKGKTVEHLTQRWMKERLQIF---NL 466
Query: 178 PIHGSGNLPSDMFNNSVDYRKKRLKAADSTLPFVEDQLPSCGEKKVQQ-NLLLGGLIN 234
+G N VD R + A +T +DQL S GE K+ + LLLGG+I+
Sbjct: 467 EKYG---------NPQVD----RHQVAGTTSLSSKDQLSS-GEVKIDEPTLLLGGIIS 510
>Q2HV80_MEDTR (tr|Q2HV80) Homeodomain-like OS=Medicago truncatula
GN=MtrDRAFT_AC148994g9v2 PE=4 SV=1
Length = 906
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 119 VWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKIL 172
+W EEELDFLWIGVRRHG+GNW+AMLRDP L FS + DL+ RWE+E+LK+L
Sbjct: 619 MWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPLRVPWDLAERWEEEQLKLL 672
>D7MLG9_ARALY (tr|D7MLG9) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_917093 PE=4 SV=1
Length = 2251
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 101 NLMMKMSNA---SRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+M++ + S+K + VD W E+ELD LWIG+RRHG GNWE +LRDP L FSK KT
Sbjct: 1716 NIMLRTGSGIGHSQKKKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDPRLKFSKFKTP 1775
Query: 158 EDLSRRWEKERLKI 171
E L+ RWE+E+ K
Sbjct: 1776 EYLAARWEEEQRKF 1789
>C5X990_SORBI (tr|C5X990) Putative uncharacterized protein Sb02g033860 OS=Sorghum
bicolor GN=Sb02g033860 PE=4 SV=1
Length = 606
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 101 NLMMKMSNASRK---DQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+MM+ AS K + +D W E+ELD LWIGVRRHG+GNW+AMLRDP L F ++T
Sbjct: 43 NIMMRAQYASNKFLKKRSKLDYWSEDELDALWIGVRRHGRGNWDAMLRDPKLKFLNNRTS 102
Query: 158 EDLSRRWEKERLKIL 172
E+L+ RW E KI+
Sbjct: 103 EELASRWILEEQKII 117
>O48579_ARATH (tr|O48579) Helicase-like protein OS=Arabidopsis thaliana
GN=At5g44800 PE=1 SV=1
Length = 2228
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 101 NLMMKMSNA---SRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTI 157
N+M++ + +K + VD W E+ELD LWIG+RRHG GNWE +LRDP L FSK KT
Sbjct: 1688 NIMLRTGSGIGHVQKKKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDPRLKFSKFKTP 1747
Query: 158 EDLSRRWEKERLKI 171
E L+ RWE+E+ K
Sbjct: 1748 EYLAARWEEEQRKF 1761
>A7LHQ1_BRANA (tr|A7LHQ1) Baby boom-interacting protein 3 (Fragment) OS=Brassica
napus PE=2 SV=1
Length = 791
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%)
Query: 111 RKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLK 170
+K + VD W E+ELD LWIG+RRHG GNWE +LRDP L FSK K+ E L+ RWE+E+ K
Sbjct: 323 QKKKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDPRLKFSKFKSPEYLAARWEEEQSK 382
Query: 171 I 171
Sbjct: 383 F 383
>B9RFT8_RICCO (tr|B9RFT8) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1437240 PE=4 SV=1
Length = 930
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%)
Query: 112 KDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKI 171
K + +WLEEELD LWIGVRRHG+ NW AMLRDP L FS +T DL+ +WE+E+ K+
Sbjct: 631 KFKSYTTLWLEEELDSLWIGVRRHGRDNWHAMLRDPRLHFSSWRTARDLAEQWEEEQAKL 690
Query: 172 L 172
L
Sbjct: 691 L 691
>B9FXD3_ORYSJ (tr|B9FXD3) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_24338 PE=4 SV=1
Length = 2258
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 86 LQKLNMSVVPQGGHVNLMMKMSNASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLR 145
L KL M Q + SN K D W E+ELD LWIGVRRHG+GNWEAMLR
Sbjct: 1679 LDKLMMRA--QYSSSKFLKNASNKFLKKSLKPDYWSEDELDALWIGVRRHGRGNWEAMLR 1736
Query: 146 DPSLSFSKHKTIEDLSRRWEKERLKIL 172
DP L F H++ E+L+ RW E KI+
Sbjct: 1737 DPKLKFLSHRSHEELASRWILEEQKII 1763
>B8B6D8_ORYSI (tr|B8B6D8) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_26092 PE=4 SV=1
Length = 2275
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 86 LQKLNMSVVPQGGHVNLMMKMSNASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLR 145
L KL M Q + SN K D W E+ELD LWIGVRRHG+GNWEAMLR
Sbjct: 1696 LDKLMMRA--QYSSSKFLKNASNKFLKKSLKPDYWSEDELDALWIGVRRHGRGNWEAMLR 1753
Query: 146 DPSLSFSKHKTIEDLSRRWEKERLKIL 172
DP L F H++ E+L+ RW E KI+
Sbjct: 1754 DPKLKFLSHRSHEELASRWILEEQKII 1780
>D7SPU8_VITVI (tr|D7SPU8) Whole genome shotgun sequence of line PN40024,
scaffold_23.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00019165001 PE=4 SV=1
Length = 600
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 108 NASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKE 167
+ S K + +W EEELDFLWIGVRRHG+ NW+AMLRDP L FS + DL+ +WE E
Sbjct: 287 SCSDKFEQHTTLWPEEELDFLWIGVRRHGRDNWDAMLRDPKLHFSPWRVASDLAEQWEVE 346
Query: 168 RLKIL 172
+ K+L
Sbjct: 347 QSKLL 351
>A5AN18_VITVI (tr|A5AN18) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_031022 PE=4 SV=1
Length = 627
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 108 NASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKE 167
+ S K + +W EEELDFLWIGVRRHG+ NW+AMLRDP L FS + DL+ +WE E
Sbjct: 390 SCSDKFEQHTTLWPEEELDFLWIGVRRHGRDNWDAMLRDPKLHFSPWRVASDLAEQWEVE 449
Query: 168 RLKIL 172
+ K+L
Sbjct: 450 QSKLL 454
>C5XVW5_SORBI (tr|C5XVW5) Putative uncharacterized protein Sb04g037215 (Fragment)
OS=Sorghum bicolor GN=Sb04g037215 PE=4 SV=1
Length = 802
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 102 LMMKMSNASRKDQGMVDVWLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLS 161
L K+ S K Q W EEELDFLWIGVRR+G NW AMLRD L FS + EDL+
Sbjct: 562 LTEKLGTYSYKRQSAP--WSEEELDFLWIGVRRYGINNWNAMLRDTRLRFSNSRMPEDLA 619
Query: 162 RRWEKERLKILYPGNLPI 179
++W+KE+ K++ P+
Sbjct: 620 KQWDKEQKKLVASALGPV 637
>Q6K6A1_ORYSJ (tr|Q6K6A1) Os02g0817000 protein OS=Oryza sativa subsp. japonica
GN=P0643F09.27 PE=4 SV=1
Length = 872
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 120 WLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKIL 172
W EEELDFLWIGVRR+G NW AMLRD L FS + EDL+++W+KE+ +L
Sbjct: 573 WSEEELDFLWIGVRRYGTNNWNAMLRDRRLRFSNSRNAEDLAKQWDKEQRNLL 625
>B8AEU7_ORYSI (tr|B8AEU7) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_09447 PE=4 SV=1
Length = 387
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 120 WLEEELDFLWIGVRRHGQGNWEAMLRDPSLSFSKHKTIEDLSRRWEKERLKIL 172
W EEELDFLWIGVRR+G NW AMLRD L FS + EDL+++W+KE+ +L
Sbjct: 121 WSEEELDFLWIGVRRYGTNNWNAMLRDRRLRFSNSRNAEDLAKQWDKEQRNLL 173