Jatropha Genome Database

JcCA0077011.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077011.20 - phase: 0 /pseudo/partial
         (85 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B6VJZ2_VITVI (tr|B6VJZ2) ORF145 OS=Vitis vinifera GN=orf145 PE=4...    70   1e-10
D7SZ15_VITVI (tr|D7SZ15) Whole genome shotgun sequence of line P...    70   1e-10
Q5M9X9_TOBAC (tr|Q5M9X9) Putative uncharacterized protein orf147...    68   3e-10
D7M7N8_ARALY (tr|D7M7N8) Putative uncharacterized protein OS=Ara...    68   3e-10
B9TA67_RICCO (tr|B9TA67) Putative uncharacterized protein OS=Ric...    68   4e-10
Q5U6B3_BETVU (tr|Q5U6B3) Orf122b protein OS=Beta vulgaris subsp....    67   5e-10
Q6YSS1_BRANA (tr|Q6YSS1) Putative uncharacterized protein orf101...    67   7e-10
Q6R9F3_MAIZE (tr|Q6R9F3) Putative uncharacterized protein orf140...    64   6e-09

>B6VJZ2_VITVI (tr|B6VJZ2) ORF145 OS=Vitis vinifera GN=orf145 PE=4 SV=1
          Length = 144

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 37/47 (78%)

Query: 1   RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
           R LEDGPDAAE + GSGFPTG GTGD +L AHHDL ARPARP +  R
Sbjct: 78  RCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATR 124


>D7SZ15_VITVI (tr|D7SZ15) Whole genome shotgun sequence of line PN40024,
           scaffold_1739.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00005452001 PE=4 SV=1
          Length = 131

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 37/47 (78%)

Query: 1   RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
           R LEDGPDAAE + GSGFPTG GTGD +L AHHDL ARPARP +  R
Sbjct: 78  RCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATR 124


>Q5M9X9_TOBAC (tr|Q5M9X9) Putative uncharacterized protein orf147 OS=Nicotiana
          tabacum GN=orf147 PE=4 SV=1
          Length = 147

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 36/47 (76%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDAAE + GSGFPTG GTGD +L AHHDL A PARP +  R
Sbjct: 39 RCLEDGPDAAERRPGSGFPTGRGTGDGHLKAHHDLQATPARPGKATR 85


>D7M7N8_ARALY (tr|D7M7N8) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_489701 PE=4 SV=1
          Length = 137

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 35/47 (74%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDAAE Q GS FPTG GTGD +L AHHDL  RPARP +  R
Sbjct: 42 RCLEDGPDAAERQPGSRFPTGRGTGDGHLKAHHDLQVRPARPGKATR 88


>B9TA67_RICCO (tr|B9TA67) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_2058770 PE=4 SV=1
          Length = 104

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 36/47 (76%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDA+E Q GSGFPTG GTGD +L AHHDL A PARP +  R
Sbjct: 39 RCLEDGPDASERQPGSGFPTGRGTGDGHLEAHHDLQATPARPGKATR 85


>Q5U6B3_BETVU (tr|Q5U6B3) Orf122b protein OS=Beta vulgaris subsp. vulgaris
          GN=orf122b PE=4 SV=1
          Length = 122

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 36/47 (76%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDAAE + GSGFPTG GTGD +L AHHDL A PARP +  R
Sbjct: 39 RCLEDGPDAAERRPGSGFPTGRGTGDGHLKAHHDLQATPARPGKATR 85


>Q6YSS1_BRANA (tr|Q6YSS1) Putative uncharacterized protein orf101b OS=Brassica
          napus GN=orf101b PE=4 SV=1
          Length = 101

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 35/47 (74%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDAAE Q GS FPTG GTGD +L AHHDL  RPARP +  R
Sbjct: 41 RCLEDGPDAAERQPGSRFPTGRGTGDGHLKAHHDLQVRPARPGKATR 87


>Q6R9F3_MAIZE (tr|Q6R9F3) Putative uncharacterized protein orf140-b OS=Zea mays
          GN=orf140-b PE=4 SV=1
          Length = 140

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 35/47 (74%)

Query: 1  RYLEDGPDAAELQLGSGFPTGMGTGDSYLGAHHDLHARPARPHEV*R 47
          R LEDGPDAAE +  SGFPT  GTGD +L AHHDL A PARP +V R
Sbjct: 39 RCLEDGPDAAERRPRSGFPTSRGTGDGHLEAHHDLQATPARPGKVTR 85