Jatropha Genome Database
- JcCA0076121.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0076121.10 + phase: 0 /pseudo/partial
(145 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line P... 114 5e-24
A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vit... 113 6e-24
B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricin... 111 3e-23
B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarp... 109 9e-23
B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarp... 108 2e-22
C5Y4T0_SORBI (tr|C5Y4T0) Putative uncharacterized protein Sb05g0... 107 6e-22
B8BL44_ORYSI (tr|B8BL44) Putative uncharacterized protein OS=Ory... 106 1e-21
Q2R2E7_ORYSJ (tr|Q2R2E7) Os11g0568600 protein OS=Oryza sativa su... 106 1e-21
C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Gly... 105 1e-21
D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arab... 105 2e-21
Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At... 105 2e-21
B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea ... 103 4e-21
C7J8W5_ORYSJ (tr|C7J8W5) Os11g0549680 protein (Fragment) OS=Oryz... 87 4e-16
D5AD69_PICSI (tr|D5AD69) Putative uncharacterized protein OS=Pic... 84 5e-15
A9RBE4_PHYPA (tr|A9RBE4) Predicted protein OS=Physcomitrella pat... 81 3e-14
B7EDV1_ORYSJ (tr|B7EDV1) cDNA clone:J013116E21, full insert sequ... 70 9e-11
B9GB57_ORYSJ (tr|B9GB57) Putative uncharacterized protein OS=Ory... 69 2e-10
B7F5C0_ORYSJ (tr|B7F5C0) cDNA clone:002-184-A08, full insert seq... 67 5e-10
Q2R2S5_ORYSJ (tr|Q2R2S5) Zinc knuckle family protein, expressed ... 60 6e-08
>D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line PN40024,
scaffold_61.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00031548001 PE=4 SV=1
Length = 392
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 57/70 (81%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEAR+NTGIDRMKIINSVAKSVPGPHKVDLSNP CLIG +EKYKELAK
Sbjct: 323 LYEARSNTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYKELAK 382
Query: 136 YNMRQLTSPK 145
YN+RQLTSPK
Sbjct: 383 YNLRQLTSPK 392
>A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_003478 PE=4 SV=1
Length = 298
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 57/70 (81%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEAR+NTGIDRMKIINSVAKSVPGPHKVDLSNP CLIG +EKYKELAK
Sbjct: 229 LYEARSNTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYKELAK 288
Query: 136 YNMRQLTSPK 145
YN+RQLTSPK
Sbjct: 289 YNLRQLTSPK 298
>B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricinus communis
GN=RCOM_1578940 PE=4 SV=1
Length = 382
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 56/70 (80%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEARANTGIDRMKIINSVAKSVPGPHKVDL+NP CLIG+VE YK LAK
Sbjct: 313 LYEARANTGIDRMKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGLVENYKGLAK 372
Query: 136 YNMRQLTSPK 145
YN+RQLTSPK
Sbjct: 373 YNLRQLTSPK 382
>B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1088041 PE=4 SV=1
Length = 378
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 56/70 (80%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
+YEARAN+GIDRMKIINSVAKSVPGPHKVDL NP CLIGV+EKYKEL+K
Sbjct: 308 MYEARANSGIDRMKIINSVAKSVPGPHKVDLGNPDKTIVVEIVKTVCLIGVIEKYKELSK 367
Query: 136 YNMRQLTSPK 145
YN+RQLTS K
Sbjct: 368 YNLRQLTSSK 377
>B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_549036 PE=4 SV=1
Length = 379
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 56/70 (80%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
+YEARAN+GIDRMKIINSVAK VPGPHKVDLSNP CLIGV+EKYKEL+K
Sbjct: 310 MYEARANSGIDRMKIINSVAKCVPGPHKVDLSNPDKTIVVEIVKTLCLIGVIEKYKELSK 369
Query: 136 YNMRQLTSPK 145
YN+RQLTS K
Sbjct: 370 YNLRQLTSSK 379
>C5Y4T0_SORBI (tr|C5Y4T0) Putative uncharacterized protein Sb05g021960 OS=Sorghum
bicolor GN=Sb05g021960 PE=4 SV=1
Length = 420
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEAR+NTGIDRMKIIN+VAKSVP PHKVDLSNP C+IGVVE+Y+EL+K
Sbjct: 347 LYEARSNTGIDRMKIINAVAKSVPQPHKVDLSNPDKTIVVQIAKTICMIGVVERYRELSK 406
Query: 136 YNMRQLTSPK 145
+N+RQLTSP+
Sbjct: 407 FNLRQLTSPE 416
>B8BL44_ORYSI (tr|B8BL44) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_36525 PE=4 SV=1
Length = 374
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 11/113 (9%)
Query: 32 TCQGSYXECCQLKLHAMLLKRKFQKQWHQLWQSIFLWMLKTRKRLYEARANTGIDRMKII 91
TC S E K + L+++ F K+ S++ + + LYEAR+NTGIDRMKII
Sbjct: 270 TCYASEEEIT--KAISPLVEKYFPKESS----SVYKFAV-----LYEARSNTGIDRMKII 318
Query: 92 NSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAKYNMRQLTSP 144
N+VAKSVP PHKVDLS+P C+IGVVE+YKELAK+N+RQLTSP
Sbjct: 319 NAVAKSVPQPHKVDLSSPDRTIIVQIAKTICMIGVVERYKELAKFNLRQLTSP 371
>Q2R2E7_ORYSJ (tr|Q2R2E7) Os11g0568600 protein OS=Oryza sativa subsp. japonica
GN=Os11g0568600 PE=2 SV=2
Length = 374
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 55 QKQWHQLWQSIFLWMLKTRKRLYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXX 114
+K + + S++ + + LYEAR+NTGIDRMKIIN+VAKSVP PHKVDLS+P
Sbjct: 287 EKYFPKESSSVYKFAV-----LYEARSNTGIDRMKIINAVAKSVPQPHKVDLSSPDRTII 341
Query: 115 XXXXXXXCLIGVVEKYKELAKYNMRQLTSP 144
C+IGVVE+YKELAK+N+RQLTSP
Sbjct: 342 VQIAKTICMIGVVERYKELAKFNLRQLTSP 371
>C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 377
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 56/70 (80%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEARANTG+DRM+II++VAKSVPGPHKVDL NP CLIGV+EKYKEL+K
Sbjct: 307 LYEARANTGVDRMEIIDAVAKSVPGPHKVDLKNPDKTIVVEIARTVCLIGVIEKYKELSK 366
Query: 136 YNMRQLTSPK 145
YN+RQLTS K
Sbjct: 367 YNLRQLTSRK 376
>D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_488088 PE=4 SV=1
Length = 362
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LY ARANTG+DRMKIIN++AKS+P PHKVDLSNP CLIGVVEKYKELAK
Sbjct: 293 LYGARANTGLDRMKIINTIAKSIPAPHKVDLSNPEMSIVVEVVKTVCLIGVVEKYKELAK 352
Query: 136 YNMRQLTS 143
YN+RQLTS
Sbjct: 353 YNLRQLTS 360
>Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At5g12410 PE=2
SV=1
Length = 376
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LY ARANTG+DRMKIIN++AKS+P PHKVDLSNP CLIGVVEKYKELAK
Sbjct: 307 LYGARANTGLDRMKIINTIAKSIPAPHKVDLSNPEMTIVVEIIKTVCLIGVVEKYKELAK 366
Query: 136 YNMRQLTS 143
YN+RQLTS
Sbjct: 367 YNLRQLTS 374
>B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea mays PE=2 SV=1
Length = 396
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEAR+NTGIDRMKIIN+ AKSVP PHKVDL NP C+IGVVE+YKEL+K
Sbjct: 324 LYEARSNTGIDRMKIINAAAKSVPQPHKVDLKNPDKTIVVQIAKTICMIGVVERYKELSK 383
Query: 136 YNMRQLTSPK 145
+N+RQLTSP+
Sbjct: 384 FNLRQLTSPE 393
>C7J8W5_ORYSJ (tr|C7J8W5) Os11g0549680 protein (Fragment) OS=Oryza sativa subsp.
japonica GN=Os11g0549680 PE=4 SV=1
Length = 111
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
YEAR+NT I+RMKIIN+V+KSVP PHKVDL++P C++GV+E+Y LAK
Sbjct: 17 FYEARSNTRINRMKIINAVSKSVPQPHKVDLNSPNRIIIVQIEKIICMVGVIERYTVLAK 76
Query: 136 YNMRQLTSP 144
+N++QLTSP
Sbjct: 77 FNLKQLTSP 85
>D5AD69_PICSI (tr|D5AD69) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 146
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 49/70 (70%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAK 135
LYEARAN+GI R II++VAK VP HKVDLSNP C+IGVV K+K+L K
Sbjct: 75 LYEARANSGIVRTNIIDTVAKLVPQGHKVDLSNPDKTIVVQIVKTICMIGVVHKFKQLLK 134
Query: 136 YNMRQLTSPK 145
YN+RQLTS K
Sbjct: 135 YNLRQLTSVK 144
>A9RBE4_PHYPA (tr|A9RBE4) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_63868 PE=4 SV=1
Length = 390
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 78 EARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAKYN 137
EARANT ID+M++IN+VAK VP PH VDL NP C +G+V ++KELAKYN
Sbjct: 255 EARANTSIDKMELINAVAKIVPQPHSVDLRNPQKTILLQIVKTTCALGIVREFKELAKYN 314
Query: 138 MRQLTSPK 145
+R LT+P+
Sbjct: 315 LRMLTNPE 322
>B7EDV1_ORYSJ (tr|B7EDV1) cDNA clone:J013116E21, full insert sequence OS=Oryza
sativa subsp. japonica PE=4 SV=1
Length = 83
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 88 MKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKYKELAKYNMRQLTSP 144
MKIIN+V+KSVP PHKVDL++P C++GV+E+Y LAK+N++QLTSP
Sbjct: 1 MKIINAVSKSVPQPHKVDLNSPNRIIIVQIEKIICMVGVIERYTVLAKFNLKQLTSP 57
>B9GB57_ORYSJ (tr|B9GB57) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_34221 PE=4 SV=1
Length = 495
Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXXCLIGVVEKY 130
YEAR+NT I+RMKIIN+V+KSVP PHKVDL++P C++GV+E++
Sbjct: 107 FYEARSNTRINRMKIINAVSKSVPQPHKVDLNSPNRIIIVQIEKIICMVGVIERF 161
>B7F5C0_ORYSJ (tr|B7F5C0) cDNA clone:002-184-A08, full insert sequence OS=Oryza
sativa subsp. japonica PE=2 SV=1
Length = 365
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 33/34 (97%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNP 109
LYEAR+NTGIDRMKIIN+VAKSVP PHKVDLS+P
Sbjct: 303 LYEARSNTGIDRMKIINAVAKSVPQPHKVDLSSP 336
>Q2R2S5_ORYSJ (tr|Q2R2S5) Zinc knuckle family protein, expressed OS=Oryza sativa
subsp. japonica GN=LOC_Os11g34820 PE=4 SV=1
Length = 571
Score = 60.5 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 76 LYEARANTGIDRMKIINSVAKSVPGPHKVDLSNPXXXXXXXXXXXX--------CLIGVV 127
YEAR+NT I+RMKIIN+V+KSVP PHKVDL++P C++GV+
Sbjct: 107 FYEARSNTRINRMKIINAVSKSVPQPHKVDLNSPNRIIIVQIEKFMTTSFHNIICMVGVI 166
Query: 128 EKYKELAKYNM 138
E AK NM
Sbjct: 167 ESSSLQAK-NM 176