Jatropha Genome Database

JcCA0076041.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0076041.10 - phase: 0 /partial
         (78 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9MYR6_POPTR (tr|B9MYR6) Homoserine dehydrogenase OS=Populus tri...   108   2e-22
B9S6K6_RICCO (tr|B9S6K6) Homoserine dehydrogenase OS=Ricinus com...    99   2e-19
D7T1I7_VITVI (tr|D7T1I7) Whole genome shotgun sequence of line P...    96   2e-18
C6TCU7_SOYBN (tr|C6TCU7) Homoserine dehydrogenase OS=Glycine max...    89   2e-16
Q3S3F6_SOYBN (tr|Q3S3F6) Homoserine dehydrogenase OS=Glycine max...    89   2e-16
B7FM35_MEDTR (tr|B7FM35) Homoserine dehydrogenase OS=Medicago tr...    87   7e-16
D7M071_ARALY (tr|D7M071) Homoserine dehydrogenase family protein...    85   3e-15
Q84JZ4_ARATH (tr|Q84JZ4) Homoserine dehydrogenase OS=Arabidopsis...    85   3e-15
Q2V358_ARATH (tr|Q2V358) Homoserine dehydrogenase OS=Arabidopsis...    85   3e-15
Q8LF92_ARATH (tr|Q8LF92) Homoserine dehydrogenase OS=Arabidopsis...    84   3e-15
B8AES5_ORYSI (tr|B8AES5) Homoserine dehydrogenase OS=Oryza sativ...    82   2e-14
Q60D48_SOLDE (tr|Q60D48) Homoserine dehydrogenase family protein...    82   3e-14
Q2RB23_ORYSJ (tr|Q2RB23) Homoserine dehydrogenase OS=Oryza sativ...    80   5e-14
Q2QYB7_ORYSJ (tr|Q2QYB7) Homoserine dehydrogenase OS=Oryza sativ...    80   9e-14
B8BLT4_ORYSI (tr|B8BLT4) Homoserine dehydrogenase OS=Oryza sativ...    80   9e-14
D5AEG5_PICSI (tr|D5AEG5) Homoserine dehydrogenase OS=Picea sitch...    79   2e-13
B4G038_MAIZE (tr|B4G038) Homoserine dehydrogenase OS=Zea mays PE...    72   2e-11
B6T9N8_MAIZE (tr|B6T9N8) Homoserine dehydrogenase OS=Zea mays PE...    72   2e-11
C5YQR0_SORBI (tr|C5YQR0) Homoserine dehydrogenase OS=Sorghum bic...    70   7e-11

>B9MYR6_POPTR (tr|B9MYR6) Homoserine dehydrogenase OS=Populus trichocarpa
           GN=POPTRDRAFT_594921 PE=3 SV=1
          Length = 376

 Score =  108 bits (269), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 60/78 (76%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INLD+I+IESLYPDEMGP AMSVE+FLGSGI  LDN++QERVK
Sbjct: 234 MDVARKALILARLLGRRINLDSIKIESLYPDEMGPDAMSVEEFLGSGIVSLDNDVQERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           +ASLN NVLRYVCVIEGS
Sbjct: 294 RASLNGNVLRYVCVIEGS 311


>B9S6K6_RICCO (tr|B9S6K6) Homoserine dehydrogenase OS=Ricinus communis
           GN=RCOM_1108890 PE=3 SV=1
          Length = 376

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 56/78 (71%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INLD+I+IESLYPDEMGP  MSVE+FL  G+ LLDN+IQERVK
Sbjct: 234 MDVARKALILARLLGRRINLDSIKIESLYPDEMGPDVMSVEEFLDGGVMLLDNDIQERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           +ASL  NVLRYVCVIE S
Sbjct: 294 RASLKGNVLRYVCVIEDS 311


>D7T1I7_VITVI (tr|D7T1I7) Whole genome shotgun sequence of line PN40024,
           scaffold_9.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00037466001 PE=4 SV=1
          Length = 377

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 58/78 (74%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              +NLD+++IESLYP+EMGP+ MS+E FL SG+ LLDN+IQERV+
Sbjct: 235 MDVARKALILSRLLGRRVNLDSLKIESLYPEEMGPNMMSLEDFLSSGLLLLDNDIQERVQ 294

Query: 61  KASLNQNVLRYVCVIEGS 78
           KA+L+  VLRYVCVIEGS
Sbjct: 295 KAALDGKVLRYVCVIEGS 312


>C6TCU7_SOYBN (tr|C6TCU7) Homoserine dehydrogenase OS=Glycine max PE=2 SV=1
          Length = 376

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 53/78 (67%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INLD+I+IESLYP EMGP  M+VE FL  G+ LLD +IQ+RV+
Sbjct: 234 MDVARKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVE 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           KA+ N NVLRYVCVI GS
Sbjct: 294 KAASNGNVLRYVCVIMGS 311


>Q3S3F6_SOYBN (tr|Q3S3F6) Homoserine dehydrogenase OS=Glycine max PE=2 SV=1
          Length = 376

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 53/78 (67%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INLD+I+IESLYP EMGP  M+VE FL  G+ LLD +IQ+RV+
Sbjct: 234 MDVARKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVE 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           KA+ N NVLRYVCVI GS
Sbjct: 294 KAASNGNVLRYVCVIMGS 311


>B7FM35_MEDTR (tr|B7FM35) Homoserine dehydrogenase OS=Medicago truncatula PE=2
           SV=1
          Length = 376

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              IN+D+I+IESLYP EMGP  M+ + FL  G+ LLD +IQERV+
Sbjct: 234 MDVARKALILARILGRRINMDSIQIESLYPKEMGPDVMTDDDFLSCGLLLLDKDIQERVE 293

Query: 61  KASLNQNVLRYVCVIEG 77
           KA+ N NVLRYVCVIEG
Sbjct: 294 KAASNGNVLRYVCVIEG 310


>D7M071_ARALY (tr|D7M071) Homoserine dehydrogenase family protein OS=Arabidopsis
           lyrata subsp. lyrata GN=ARALYDRAFT_910146 PE=4 SV=1
          Length = 376

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 53/78 (67%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I +D+I+IES+YP+EMGP  MSV+ FL +GI  LD NI+ERVK
Sbjct: 234 MDVARKGLILARLLGKRIIMDSIKIESMYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           +AS N  VLRYVCVIEGS
Sbjct: 294 RASSNGCVLRYVCVIEGS 311


>Q84JZ4_ARATH (tr|Q84JZ4) Homoserine dehydrogenase OS=Arabidopsis thaliana
           GN=At5g21060 PE=2 SV=1
          Length = 376

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 52/78 (66%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I +D+I+IESLYP+EMGP  MSV+ FL +GI  LD NI+ERVK
Sbjct: 234 MDVARKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           KAS    VLRYVCVIEGS
Sbjct: 294 KASSKGCVLRYVCVIEGS 311


>Q2V358_ARATH (tr|Q2V358) Homoserine dehydrogenase OS=Arabidopsis thaliana
           GN=At5g21060 PE=3 SV=1
          Length = 378

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 52/78 (66%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I +D+I+IESLYP+EMGP  MSV+ FL +GI  LD NI+ERVK
Sbjct: 236 MDVARKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVK 295

Query: 61  KASLNQNVLRYVCVIEGS 78
           KAS    VLRYVCVIEGS
Sbjct: 296 KASSKGCVLRYVCVIEGS 313


>Q8LF92_ARATH (tr|Q8LF92) Homoserine dehydrogenase OS=Arabidopsis thaliana PE=2
           SV=1
          Length = 376

 Score = 84.3 bits (207), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 52/78 (66%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I +D+I+IESLYP+EMGP  MSV+ FL +GI  LD NI+ERVK
Sbjct: 234 MDVARKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVK 293

Query: 61  KASLNQNVLRYVCVIEGS 78
           KAS    VLRYVCVIEGS
Sbjct: 294 KASSKGCVLRYVCVIEGS 311


>B8AES5_ORYSI (tr|B8AES5) Homoserine dehydrogenase OS=Oryza sativa subsp. indica
           GN=OsI_07919 PE=3 SV=1
          Length = 384

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I+++NI +ESLYP E+GP AMS + FL SG+  LD +IQERVK
Sbjct: 239 MDVARKALILARLLGQQISMENINVESLYPSELGPDAMSTKDFLESGLVQLDKSIQERVK 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            ASL  NVLRYVC IE +
Sbjct: 299 AASLKGNVLRYVCKIEST 316


>Q60D48_SOLDE (tr|Q60D48) Homoserine dehydrogenase family protein OS=Solanum
           demissum GN=SDM1_53t00019 PE=4 SV=2
          Length = 170

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              +NLDN++IESLYP+EMGP  M +E FL +G+ LLD  I++R+K
Sbjct: 28  MDVARKALILARLLGRRLNLDNMKIESLYPEEMGPDVMPLEDFLVNGLPLLDQKIEDRIK 87

Query: 61  KASLNQNVLRYVCVIE 76
           +AS N NVLRYVC+I+
Sbjct: 88  QASANGNVLRYVCLID 103


>Q2RB23_ORYSJ (tr|Q2RB23) Homoserine dehydrogenase OS=Oryza sativa subsp.
           japonica GN=Os11g0128800 PE=2 SV=1
          Length = 384

 Score = 80.5 bits (197), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 50/78 (64%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I+++NI +ESLYP E+GP AMS + FL SG+  LD +I+ERVK
Sbjct: 239 MDVARKALILARLLGQQISMENINVESLYPSELGPDAMSTKDFLESGLVQLDKSIEERVK 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            ASL  NVLRYVC IE +
Sbjct: 299 AASLKGNVLRYVCKIEST 316


>Q2QYB7_ORYSJ (tr|Q2QYB7) Homoserine dehydrogenase OS=Oryza sativa subsp.
           japonica GN=Os12g0125400 PE=3 SV=1
          Length = 384

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 49/78 (62%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I+++NI +ESLYP E GP AMS + FL SG+  LD +I+ERVK
Sbjct: 239 MDVARKALILARLLGQRISMENINVESLYPSEFGPDAMSTKDFLESGLVQLDKSIEERVK 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            ASL  NVLRYVC IE +
Sbjct: 299 AASLKGNVLRYVCKIEST 316


>B8BLT4_ORYSI (tr|B8BLT4) Homoserine dehydrogenase OS=Oryza sativa subsp. indica
           GN=OsI_37318 PE=3 SV=1
          Length = 384

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 49/78 (62%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I+++NI +ESLYP E GP AMS + FL SG+  LD +I+ERVK
Sbjct: 239 MDVARKALILARLLGQRISMENINVESLYPSEFGPDAMSTKDFLESGLVQLDKSIEERVK 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            ASL  NVLRYVC IE +
Sbjct: 299 AASLKGNVLRYVCKIEST 316


>D5AEG5_PICSI (tr|D5AEG5) Homoserine dehydrogenase OS=Picea sitchensis PE=2 SV=1
          Length = 395

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 48/78 (61%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              INL+N+E+ESLYP EMGP  MSVE FL  G+  LD  ++ER+K
Sbjct: 250 MDVARKALILARLLGRQINLENVEVESLYPSEMGPDDMSVEDFLNKGLPTLDEAMEERIK 309

Query: 61  KASLNQNVLRYVCVIEGS 78
            A+ N N +RYVC I+ S
Sbjct: 310 NAASNDNAVRYVCTIDNS 327


>B4G038_MAIZE (tr|B4G038) Homoserine dehydrogenase OS=Zea mays PE=2 SV=1
          Length = 384

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 49/78 (62%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I++++I +ESLYP E+GP A+S + FL SG+  LD +++ER++
Sbjct: 239 MDVARKALILARLLGQQISMESINVESLYPSELGPDAVSTKDFLESGLVQLDKSMEERIR 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            AS   NVLRYVC IE +
Sbjct: 299 AASSRGNVLRYVCEIESA 316


>B6T9N8_MAIZE (tr|B6T9N8) Homoserine dehydrogenase OS=Zea mays PE=2 SV=1
          Length = 384

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 49/78 (62%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I++++I +ESLYP E+GP A+S + FL SG+  LD +++ER++
Sbjct: 239 MDVARKALILARLLGQQISMESINVESLYPSELGPDAVSTKDFLESGLVQLDKSMEERIR 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            AS   NVLRYVC IE +
Sbjct: 299 AASSRGNVLRYVCEIESA 316


>C5YQR0_SORBI (tr|C5YQR0) Homoserine dehydrogenase OS=Sorghum bicolor
           GN=Sb08g001720 PE=3 SV=1
          Length = 384

 Score = 70.1 bits (170), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/78 (44%), Positives = 48/78 (61%)

Query: 1   MDVXXXXXXXXXXXXXXINLDNIEIESLYPDEMGPHAMSVEKFLGSGIALLDNNIQERVK 60
           MDV              I+++NI +ESLYP E+GP A+S + FL SG+  LD +++ERVK
Sbjct: 239 MDVARKALILARLLGQQISMENINVESLYPSELGPDAVSTKDFLESGLVQLDKSMEERVK 298

Query: 61  KASLNQNVLRYVCVIEGS 78
            A+   NVLRYV  IE +
Sbjct: 299 AAASRGNVLRYVAEIEST 316