Jatropha Genome Database

JcCA0072641.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0072641.10 + phase: 0 /partial
         (127 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S9L7_RICCO (tr|B9S9L7) Putative uncharacterized protein OS=Ric...   161   2e-38
B9IJ61_POPTR (tr|B9IJ61) Predicted protein OS=Populus trichocarp...   130   4e-29
B9HEA4_POPTR (tr|B9HEA4) Predicted protein OS=Populus trichocarp...    94   6e-18
D7U664_VITVI (tr|D7U664) Whole genome shotgun sequence of line P...    84   4e-15
C6T7L7_SOYBN (tr|C6T7L7) Putative uncharacterized protein OS=Gly...    62   2e-08

>B9S9L7_RICCO (tr|B9S9L7) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0886650 PE=4 SV=1
          Length = 313

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 97/120 (80%), Gaps = 2/120 (1%)

Query: 7   GTLRDLTKGGKQISFDQNEMG--NIKPSTLERENPYANRDXXXXXXXXXXXXLDSDNSVR 64
           GTLRDLTKGG+ +SFDQNE+G  + KPST+E+ENPY N+D            LDS+NS+R
Sbjct: 182 GTLRDLTKGGRHVSFDQNELGTPDFKPSTMEQENPYVNQDEEGSPEESKPVLLDSENSMR 241

Query: 65  PNEQELLETDETPTNPFPMHLENSSVNINDEDLQDTLDDLGNVSSSEFEIPGNFDDQVDI 124
           PN+Q+LLETD+T T+P P H+ENSSVN++DED Q+TLD LGNVS SEFEIPGNFDDQVDI
Sbjct: 242 PNDQDLLETDDTVTDPLPTHVENSSVNLDDEDFQETLDGLGNVSGSEFEIPGNFDDQVDI 301


>B9IJ61_POPTR (tr|B9IJ61) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_577294 PE=4 SV=1
          Length = 368

 Score =  130 bits (327), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%), Gaps = 2/120 (1%)

Query: 7   GTLRDLTKGGKQISFDQNE--MGNIKPSTLERENPYANRDXXXXXXXXXXXXLDSDNSVR 64
           GTLRDL+KGG+ ISF+QNE    + KP  +E ENP+AN +            L+S+NS+R
Sbjct: 248 GTLRDLSKGGRHISFNQNEPVTPDFKPLNMELENPFANPEEEESQEESKPVPLESENSIR 307

Query: 65  PNEQELLETDETPTNPFPMHLENSSVNINDEDLQDTLDDLGNVSSSEFEIPGNFDDQVDI 124
           PNEQ++LETD+   +P PMH+ENSSVN++DED ++TLD+LG+VS SEFEIP +FDDQV +
Sbjct: 308 PNEQDMLETDKNVPDPLPMHVENSSVNLDDEDFENTLDELGDVSGSEFEIPEHFDDQVVV 367


>B9HEA4_POPTR (tr|B9HEA4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_562359 PE=4 SV=1
          Length = 101

 Score = 93.6 bits (231), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 59/66 (89%)

Query: 57  LDSDNSVRPNEQELLETDETPTNPFPMHLENSSVNINDEDLQDTLDDLGNVSSSEFEIPG 116
           LDS+NS+RPNEQ+LLETDET  +P PM +ENSS+N++DED ++TLD+LG+VS SEFEIP 
Sbjct: 33  LDSENSLRPNEQDLLETDETAPDPLPMRVENSSMNLDDEDFENTLDELGDVSGSEFEIPE 92

Query: 117 NFDDQV 122
           +FDDQV
Sbjct: 93  HFDDQV 98


>D7U664_VITVI (tr|D7U664) Whole genome shotgun sequence of line PN40024,
           scaffold_114.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00012523001 PE=4 SV=1
          Length = 188

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 8/123 (6%)

Query: 7   GTLRDLTKGGKQISFDQNEM---GNIKPSTLERENPYANRDXXXXXXXXXXXXLDSDNSV 63
           GTLRDL+KG + I F Q+E+    +IKP T+ERE  Y N D            L+S N  
Sbjct: 57  GTLRDLSKGSRMIPFGQDELETSDDIKPVTMEREKAYGNHDELGSSEEMKPVPLESGNPT 116

Query: 64  --RPNEQELLETDETPTNPFPMHLENSSVNINDEDLQDTLDDLGNVSSSEFEIPGNFDDQ 121
             + NEQ+LLET     +  P+ ++NSS+N    D Q+  + L NVS ++FEIP NFD+Q
Sbjct: 117 TGQQNEQDLLETAVALVDHLPVPVDNSSIN---PDEQENTEVLANVSGTDFEIPTNFDEQ 173

Query: 122 VDI 124
           VD+
Sbjct: 174 VDV 176


>C6T7L7_SOYBN (tr|C6T7L7) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 351

 Score = 61.6 bits (148), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 7   GTLRDLTKGGKQISFDQNEMG---NIKP-STLERENP--YANRDXXXXXXXXXXXXLDSD 60
           GTLRDL+KGG+ +S +Q+++    ++KP S LE E P  +  +D              S+
Sbjct: 236 GTLRDLSKGGRNLSVEQSDLDTPIDVKPTSVLEGELPGIHDEQDSSEDPSKSNAADGSSN 295

Query: 61  NSVRPNEQELLETDETPTNPFPMHLENSSVNINDEDLQDTLDDLGNVSSSEFEIPGNFD 119
           ++V P+++EL ET E  TN  P+ + +SS N N+   Q+ L +L N S ++ +IPGNFD
Sbjct: 296 HAVNPSDEELPETAEHFTNVLPLGIGHSSTNENE---QEPLVELSNPSDTDIDIPGNFD 351