Jatropha Genome Database

JcCA0071111.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071111.10 - phase: 0 /partial/short
         (46 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7SZP6_VITVI (tr|D7SZP6) Whole genome shotgun sequence of line P...    60   7e-08
D7MV68_ARALY (tr|D7MV68) Predicted protein OS=Arabidopsis lyrata...    60   7e-08
B9SQS5_RICCO (tr|B9SQS5) 3-isopropylmalate dehydratase, putative...    60   7e-08
D7TL65_VITVI (tr|D7TL65) Whole genome shotgun sequence of line P...    57   6e-07
B9HSU8_POPTR (tr|B9HSU8) Predicted protein OS=Populus trichocarp...    57   8e-07
B8LQY6_PICSI (tr|B8LQY6) Putative uncharacterized protein OS=Pic...    57   8e-07
B8LQ24_PICSI (tr|B8LQ24) Putative uncharacterized protein OS=Pic...    56   1e-06
D7LFP0_ARALY (tr|D7LFP0) Predicted protein OS=Arabidopsis lyrata...    56   1e-06

>D7SZP6_VITVI (tr|D7SZP6) Whole genome shotgun sequence of line PN40024,
           scaffold_49.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00027922001 PE=4 SV=1
          Length = 508

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARA+EK QL PGEN W NVD  +      PG+FGIFK+EFG
Sbjct: 66  MTMTEKILARASEKPQLSPGENVWVNVDLLMTHDVCGPGSFGIFKKEFG 114


>D7MV68_ARALY (tr|D7MV68) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_682975 PE=4 SV=1
          Length = 508

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARA+EK+ ++PG+N W NVD  +      PGAFGIFKREFG
Sbjct: 66  MTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFG 114


>B9SQS5_RICCO (tr|B9SQS5) 3-isopropylmalate dehydratase, putative OS=Ricinus
           communis GN=RCOM_1217310 PE=4 SV=1
          Length = 510

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARA+EK+QL PGEN W NVD  +      PG+ GIFKREFG
Sbjct: 68  MTMTEKILARASEKSQLSPGENVWVNVDVLMTHDVCGPGSIGIFKREFG 116


>D7TL65_VITVI (tr|D7TL65) Whole genome shotgun sequence of line PN40024,
           scaffold_56.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00029978001 PE=4 SV=1
          Length = 528

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARA++K QL PGEN W +VD  +      PG+FGIFK+EFG
Sbjct: 66  MTMTEKILARASQKPQLSPGENVWVDVDILMTHDVCGPGSFGIFKKEFG 114


>B9HSU8_POPTR (tr|B9HSU8) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_821804 PE=4 SV=1
          Length = 462

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 1  MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
          + MT KI ARA+EK QLIPGEN W NVD  +      PG+ GIFK+EFG
Sbjct: 20 LTMTEKIFARASEKPQLIPGENVWVNVDILMTHDVCGPGSIGIFKKEFG 68


>B8LQY6_PICSI (tr|B8LQY6) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 515

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARAAEK+Q+ PGEN W  VD+ +      PG  GIFK+EFG
Sbjct: 74  MTMTEKILARAAEKSQVNPGENVWVKVDNLMTHDVCGPGTIGIFKKEFG 122


>B8LQ24_PICSI (tr|B8LQ24) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 516

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 1   MAMTLKILARAAEKTQLIPGENDWDNVDDPLHF---FPGAFGIFKREFG 46
           M MT KILARAAE++Q+ PGEN W  VD+ +      PG  GIFK+EFG
Sbjct: 75  MTMTEKILARAAERSQVSPGENVWVKVDNLMTHDVCGPGTIGIFKKEFG 123


>D7LFP0_ARALY (tr|D7LFP0) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
          GN=ARALYDRAFT_669051 PE=4 SV=1
          Length = 79

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 1  MAMTLKILARAAEKTQLIPGENDWDNVDDPLH---FFPGAFGIFKREFG 46
          M MT KILARA+EK+ ++PG+N W NVD  +      P AFGIFKREFG
Sbjct: 1  MTMTEKILARASEKSLVVPGDNVWVNVDVLMTHDVCGPRAFGIFKREFG 49