Jatropha Genome Database

JcCA0068421.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0068421.10 + phase: 0 
         (91 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9GKH0_POPTR (tr|B9GKH0) Predicted protein OS=Populus trichocarp...    96   2e-18
B9RCC7_RICCO (tr|B9RCC7) Putative uncharacterized protein OS=Ric...    95   3e-18

>B9GKH0_POPTR (tr|B9GKH0) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_640485 PE=4 SV=1
          Length = 617

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 53/61 (86%), Gaps = 2/61 (3%)

Query: 21 PRSPMPKSPLPRSPVPKSPEFYEKYKSRCAYSLMSFFHFRQRRSKKLISDTDKRCLKRHA 80
          P+SP+P+SP P+SP+P+SPEFYEKYKS+CAY L++ FHFRQR SKKLIS  DK  LKRHA
Sbjct: 15 PKSPLPRSPFPKSPMPQSPEFYEKYKSKCAYGLINIFHFRQRHSKKLIS--DKAVLKRHA 72

Query: 81 L 81
          +
Sbjct: 73 V 73


>B9RCC7_RICCO (tr|B9RCC7) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1686990 PE=4 SV=1
          Length = 942

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 4/77 (5%)

Query: 6  PNSNMLKTSLSKNSVPRSPMPKSPLPRSPVPKSPEFYEKYKSRCAYSLMSFFHFRQRRSK 65
          P S ++KTS+SK+S+P+SPM KSP+P SP+ KSP  YEKYKSRCAY    FF+F +RRSK
Sbjct: 21 PKSPVVKTSISKSSMPKSPMQKSPMPNSPMQKSP-IYEKYKSRCAY---GFFNFLRRRSK 76

Query: 66 KLISDTDKRCLKRHALG 82
          KLI+D D+R + RHALG
Sbjct: 77 KLIADADRRRISRHALG 93