Jatropha Genome Database

JcCA0066651.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066651.10 - phase: 0 /partial
         (190 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9MT85_POPTR (tr|B9MT85) Predicted protein OS=Populus trichocarp...    91   4e-17
B9IJ01_POPTR (tr|B9IJ01) Predicted protein OS=Populus trichocarp...    72   4e-11

>B9MT85_POPTR (tr|B9MT85) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_589395 PE=4 SV=1
          Length = 918

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 24/204 (11%)

Query: 1   MSANLDRIDLNSDVVSVEPENDVHGF-NIPEPMIMPGL-SNAETLTDP----KGQTLEPV 54
           MSANLD IDLNSDV+S EPENDV GF N+ E     GL S+AE L D     +GQ  E V
Sbjct: 1   MSANLDSIDLNSDVLSGEPENDVKGFNNVSEVRTKVGLSSDAEALIDSGKNGEGQKQEAV 60

Query: 55  IDQVKDFEG-AKLTVNGLGNGGLERQSESVDREINMEAKIKS---LEEESNTVVDVSSGE 110
           IDQVKDF+G   L    +G  G E + +S D+ +++E +  S   +++ S   V+V+   
Sbjct: 61  IDQVKDFKGDYDLKEVAVGGIGREGKMDSADKSVDLEGENGSGSGVDDGSAQEVEVAETT 120

Query: 111 VVQFTKTQFGECDQVKEELKEGIC----SGSDFENSIKVQKVDDTCALPRTVDMEGKEVN 166
           V    K +     +++EE+KEG C    S S  E+ I+V          ++ D++ K  N
Sbjct: 121 VAHSRKVEGESSFKIEEEVKEGDCGVASSSSVGEDDIQV----------KSADVKVKVDN 170

Query: 167 ANDSSPVKDASHVSAEVISGCIEN 190
           AND SP K+  +VS ++ S  +E+
Sbjct: 171 ANDLSPHKEPGNVSPKISSEGVES 194


>B9IJ01_POPTR (tr|B9IJ01) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_576648 PE=4 SV=1
          Length = 639

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 110/208 (52%), Gaps = 32/208 (15%)

Query: 1   MSANLDRIDLNSDVVSVEPENDVHGF-NIPEPMIMPGL-SNAETL----TDPKGQTLEPV 54
           M ANLD IDLNSDVVS E E+ V+GF N+     M GL S+AETL    T+ +GQ  EPV
Sbjct: 1   MPANLDSIDLNSDVVSGEREDGVNGFSNVSVVKSMVGLSSDAETLMDSVTNSQGQNQEPV 60

Query: 55  IDQVKDFEGAK-LTVNGLGNGGLERQSESVDREINMEAKIKSLEEESNTVVDVSSGEVVQ 113
           +D+VKDF+GA  L    +G  G E + +SV + ++ E +  S     + V D S  E  +
Sbjct: 61  VDEVKDFKGANDLKEVAVGGLGWEGKMDSVYKSVDFEGENGS----GSGVGDASVREAAE 116

Query: 114 FTKTQFGE--------CD---QVKEELKEGICSGSDFENSIKVQKVDDTCALPRTVDMEG 162
            T+T   +        C+   +VK     G+ S S  E++I+V+            ++E 
Sbjct: 117 ITETHSSKVVVEENSSCEIEGEVKAGGCGGVSSSSVGEDAIQVE----------NANVEV 166

Query: 163 KEVNANDSSPVKDASHVSAEVISGCIEN 190
           K  +AND  P K   +VS +V S  +EN
Sbjct: 167 KVDSANDLLPRKKPGNVSPKVSSEGVEN 194