Jatropha Genome Database

JcCA0059711.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0059711.10 - phase: 0 
         (66 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RYK1_RICCO (tr|B9RYK1) Putative uncharacterized protein OS=Ric...    57   7e-07

>B9RYK1_RICCO (tr|B9RYK1) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0813860 PE=4 SV=1
          Length = 202

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 1   MDAPAAKGKSGRKC-FQSEKMPTQXXXXXXXXXXXXXXXXXXXXXYNYDVAKDVPLEGRY 59
           M++PA   K+ RK    +EK+P+Q                     YNYD+ KD+PLEGRY
Sbjct: 136 MESPAPVVKNCRKIRLPAEKVPSQVEIDEFFAEAEKKEQKRFADKYNYDIVKDLPLEGRY 195

Query: 60  QWVRLKP 66
           QWVRLKP
Sbjct: 196 QWVRLKP 202