Jatropha Genome Database
- JcCA0022221.40
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0022221.40 - phase: 0 /pseudo/partial
(124 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A5ARD9_VITVI (tr|A5ARD9) Putative uncharacterized protein OS=Vit... 64 7e-09
B9S2L2_RICCO (tr|B9S2L2) Laccase, putative OS=Ricinus communis G... 61 3e-08
B9N1I1_POPTR (tr|B9N1I1) Predicted protein OS=Populus trichocarp... 61 4e-08
B9HZV5_POPTR (tr|B9HZV5) Predicted protein (Fragment) OS=Populus... 61 4e-08
D7SKM1_VITVI (tr|D7SKM1) Whole genome shotgun sequence of line P... 60 6e-08
A5C7L3_VITVI (tr|A5C7L3) Putative uncharacterized protein OS=Vit... 60 9e-08
B9GMJ0_POPTR (tr|B9GMJ0) Predicted protein OS=Populus trichocarp... 60 9e-08
D7THL1_VITVI (tr|D7THL1) Whole genome shotgun sequence of line P... 60 9e-08
B9GIL1_POPTR (tr|B9GIL1) Predicted protein OS=Populus trichocarp... 60 1e-07
A5BYA7_VITVI (tr|A5BYA7) Putative uncharacterized protein (Fragm... 59 1e-07
B9HBT3_POPTR (tr|B9HBT3) Laccase 110c OS=Populus trichocarpa GN=... 59 1e-07
B9N1I0_POPTR (tr|B9N1I0) Predicted protein OS=Populus trichocarp... 59 1e-07
D7THL9_VITVI (tr|D7THL9) Whole genome shotgun sequence of line P... 59 2e-07
O24042_LIRTU (tr|O24042) Laccase OS=Liriodendron tulipifera GN=L... 59 2e-07
A5AKT5_VITVI (tr|A5AKT5) Putative uncharacterized protein OS=Vit... 59 2e-07
D7SKP6_VITVI (tr|D7SKP6) Whole genome shotgun sequence of line P... 59 2e-07
O24044_LIRTU (tr|O24044) Laccase OS=Liriodendron tulipifera GN=L... 58 3e-07
D7MT54_ARALY (tr|D7MT54) Putative uncharacterized protein OS=Ara... 58 4e-07
B9HZV6_POPTR (tr|B9HZV6) Predicted protein OS=Populus trichocarp... 58 4e-07
B9SZZ2_RICCO (tr|B9SZZ2) Laccase, putative OS=Ricinus communis G... 57 5e-07
A5AEC2_VITVI (tr|A5AEC2) Putative uncharacterized protein OS=Vit... 57 5e-07
D7TLR4_VITVI (tr|D7TLR4) Whole genome shotgun sequence of line P... 57 5e-07
D7TLP4_VITVI (tr|D7TLP4) Whole genome shotgun sequence of line P... 57 5e-07
A5BDB6_VITVI (tr|A5BDB6) Putative uncharacterized protein OS=Vit... 57 6e-07
D7TLR5_VITVI (tr|D7TLR5) Whole genome shotgun sequence of line P... 57 7e-07
D7THL2_VITVI (tr|D7THL2) Whole genome shotgun sequence of line P... 56 1e-06
A5ACW6_VITVI (tr|A5ACW6) Putative uncharacterized protein OS=Vit... 56 1e-06
D7THL3_VITVI (tr|D7THL3) Whole genome shotgun sequence of line P... 56 2e-06
O24043_LIRTU (tr|O24043) Laccase OS=Liriodendron tulipifera GN=L... 55 2e-06
C5YZ93_SORBI (tr|C5YZ93) Putative uncharacterized protein Sb09g0... 55 2e-06
D7THL4_VITVI (tr|D7THL4) Whole genome shotgun sequence of line P... 55 2e-06
B9T0Q5_RICCO (tr|B9T0Q5) Laccase, putative OS=Ricinus communis G... 55 3e-06
>A5ARD9_VITVI (tr|A5ARD9) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_003134 PE=4 SV=1
Length = 611
Score = 63.5 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 79 SRYMVHALPYGSSHKLGYEDGLGCVRWKASQSKAASSTLRPSHV 122
+R MVHAL G+ H+LG EDG+GC+RWKA QS+AASST R S V
Sbjct: 553 NRGMVHALSPGNPHQLGLEDGVGCLRWKAPQSEAASSTSRSSQV 596
Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 463 VVLPFNTSVELVMQDTSILGAESHPLHL 490
>B9S2L2_RICCO (tr|B9S2L2) Laccase, putative OS=Ricinus communis GN=RCOM_1209720
PE=4 SV=1
Length = 580
Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVELIMQDTSILGAESHPLHL
Sbjct: 458 VVLPFNTSVELIMQDTSILGAESHPLHL 485
>B9N1I1_POPTR (tr|B9N1I1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_579478 PE=4 SV=1
Length = 581
Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVELIMQDTSILGAESHPLHL
Sbjct: 459 VVLPFNTSVELIMQDTSILGAESHPLHL 486
>B9HZV5_POPTR (tr|B9HZV5) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_235930 PE=4 SV=1
Length = 570
Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVELIMQDTSILGAESHPLHL
Sbjct: 448 VVLPFNTSVELIMQDTSILGAESHPLHL 475
>D7SKM1_VITVI (tr|D7SKM1) Whole genome shotgun sequence of line PN40024,
scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025046001 PE=4 SV=1
Length = 566
Score = 60.5 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 444 VVLPFNTSVELVMQDTSILGAESHPLHL 471
>A5C7L3_VITVI (tr|A5C7L3) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_020528 PE=4 SV=1
Length = 550
Score = 59.7 bits (143), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 60
VVLPFNT VEL++QDTSI+GAESHPLHL
Sbjct: 452 VVLPFNTRVELVLQDTSIIGAESHPLHLHGFNFYVVGQGFGNFDPKKDPANFNLVDSIER 511
Query: 61 HR-WCTFWRLGCYKIPCRXSRYMVHALPYGSSHK 93
+ F RLG + P R SR +V+ALP G S K
Sbjct: 512 NTVGVPFRRLGGHPFPRRQSRCLVYALPPGKSRK 545
>B9GMJ0_POPTR (tr|B9GMJ0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_548008 PE=4 SV=1
Length = 581
Score = 59.7 bits (143), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT+VELIMQDTSILGAESHPLHL
Sbjct: 459 VVLPFNTTVELIMQDTSILGAESHPLHL 486
>D7THL1_VITVI (tr|D7THL1) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00034137001 PE=4 SV=1
Length = 586
Score = 59.7 bits (143), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLP+NTSVEL+MQDTSILGAESHPLHL
Sbjct: 464 VVLPYNTSVELVMQDTSILGAESHPLHL 491
>B9GIL1_POPTR (tr|B9GIL1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_797888 PE=4 SV=1
Length = 580
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVELIMQDTSILG ESHPLHL
Sbjct: 458 VVLPFNTSVELIMQDTSILGVESHPLHL 485
>A5BYA7_VITVI (tr|A5BYA7) Putative uncharacterized protein (Fragment) OS=Vitis
vinifera GN=VITISV_025911 PE=4 SV=1
Length = 568
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHP HL
Sbjct: 446 VVLPFNTSVELVMQDTSILGAESHPFHL 473
>B9HBT3_POPTR (tr|B9HBT3) Laccase 110c OS=Populus trichocarpa GN=LAC110c PE=4
SV=1
Length = 579
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSI+GAESHPLHL
Sbjct: 457 VVLPFNTSVELVMQDTSIIGAESHPLHL 484
>B9N1I0_POPTR (tr|B9N1I0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_783559 PE=4 SV=1
Length = 581
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
V+LPFNTSVELIMQDTSILGAESHPLHL
Sbjct: 459 VMLPFNTSVELIMQDTSILGAESHPLHL 486
>D7THL9_VITVI (tr|D7THL9) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00034146001 PE=4 SV=1
Length = 579
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHP HL
Sbjct: 457 VVLPFNTSVELVMQDTSILGAESHPFHL 484
>O24042_LIRTU (tr|O24042) Laccase OS=Liriodendron tulipifera GN=LAC2-2 PE=2 SV=1
Length = 585
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFN SVEL+MQDTSILGAESHPLHL
Sbjct: 463 VVLPFNASVELVMQDTSILGAESHPLHL 490
>A5AKT5_VITVI (tr|A5AKT5) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_005802 PE=4 SV=1
Length = 559
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILGAESHPLHL
Sbjct: 437 VVLPFNTSVELVVQDTSILGAESHPLHL 464
>D7SKP6_VITVI (tr|D7SKP6) Whole genome shotgun sequence of line PN40024,
scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025077001 PE=4 SV=1
Length = 585
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILGAESHPLHL
Sbjct: 463 VVLPFNTSVELVVQDTSILGAESHPLHL 490
>O24044_LIRTU (tr|O24044) Laccase OS=Liriodendron tulipifera GN=LAC2-4 PE=2 SV=1
Length = 585
Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSI GAESHPLHL
Sbjct: 463 VVLPFNTSVELVMQDTSIQGAESHPLHL 490
>D7MT54_ARALY (tr|D7MT54) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_496140 PE=4 SV=1
Length = 577
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
+VLP+NTSVEL+MQDTSILGAESHPLHL
Sbjct: 455 MVLPYNTSVELVMQDTSILGAESHPLHL 482
>B9HZV6_POPTR (tr|B9HZV6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1094292 PE=4 SV=1
Length = 581
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVELIMQ TSILGAESHPLHL
Sbjct: 459 VVLPFNTSVELIMQGTSILGAESHPLHL 486
>B9SZZ2_RICCO (tr|B9SZZ2) Laccase, putative OS=Ricinus communis GN=RCOM_0452110
PE=4 SV=1
Length = 539
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 450 VVLPFNTSVELVLQDTSILGNESHPLHL 477
>A5AEC2_VITVI (tr|A5AEC2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_033042 PE=4 SV=1
Length = 547
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 425 VVLPFNTSVELVLQDTSILGIESHPLHL 452
>D7TLR4_VITVI (tr|D7TLR4) Whole genome shotgun sequence of line PN40024,
scaffold_19.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00016512001 PE=4 SV=1
Length = 1094
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 972 VVLPFNTSVELVLQDTSILGIESHPLHL 999
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT+VEL++QDTSILG ESHPLHL
Sbjct: 451 VVLPFNTTVELVLQDTSILGIESHPLHL 478
>D7TLP4_VITVI (tr|D7TLP4) Whole genome shotgun sequence of line PN40024,
scaffold_19.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00016490001 PE=4 SV=1
Length = 1050
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 928 VVLPFNTSVELVLQDTSILGIESHPLHL 955
>A5BDB6_VITVI (tr|A5BDB6) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_037366 PE=4 SV=1
Length = 574
Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 452 VVLPFNTSVELVLQDTSILGIESHPLHL 479
>D7TLR5_VITVI (tr|D7TLR5) Whole genome shotgun sequence of line PN40024,
scaffold_19.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00016513001 PE=4 SV=1
Length = 583
Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILG ESHPLHL
Sbjct: 461 VVLPFNTSVELVLQDTSILGIESHPLHL 488
>D7THL2_VITVI (tr|D7THL2) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00034138001 PE=4 SV=1
Length = 1829
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT VEL++QDTSI+GAESHPLHL
Sbjct: 1707 VVLPFNTRVELVLQDTSIIGAESHPLHL 1734
>A5ACW6_VITVI (tr|A5ACW6) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_012401 PE=4 SV=1
Length = 573
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT+VEL++QDTSILG ESHPLHL
Sbjct: 451 VVLPFNTTVELVLQDTSILGIESHPLHL 478
>D7THL3_VITVI (tr|D7THL3) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00034139001 PE=4 SV=1
Length = 584
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT VEL++QDTSI+GAESHPLHL
Sbjct: 462 VVLPFNTRVELVLQDTSIIGAESHPLHL 489
>O24043_LIRTU (tr|O24043) Laccase OS=Liriodendron tulipifera GN=LAC2-3 PE=2 SV=1
Length = 586
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT+VEL++QDTSI GAESHPLHL
Sbjct: 464 VVLPFNTTVELVLQDTSIQGAESHPLHL 491
>C5YZ93_SORBI (tr|C5YZ93) Putative uncharacterized protein Sb09g022510 OS=Sorghum
bicolor GN=Sb09g022510 PE=4 SV=1
Length = 585
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 VLPFNTSVELIMQDTSILGAESHPLHL 28
VLPF TSVEL++QDTSILGAESHPLHL
Sbjct: 464 VLPFGTSVELVLQDTSILGAESHPLHL 490
>D7THL4_VITVI (tr|D7THL4) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00034140001 PE=4 SV=1
Length = 261
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNT VEL++QDTSI+GAESHPLHL
Sbjct: 139 VVLPFNTRVELVLQDTSIIGAESHPLHL 166
>B9T0Q5_RICCO (tr|B9T0Q5) Laccase, putative OS=Ricinus communis GN=RCOM_1440300
PE=4 SV=1
Length = 576
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVL +NTSVELI+QDTSILGAESHPLHL
Sbjct: 454 VVLSYNTSVELILQDTSILGAESHPLHL 481