Jatropha Genome Database

JcCA0020761.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020761.20 - phase: 0 
         (250 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RFF5_RICCO (tr|B9RFF5) Putative uncharacterized protein OS=Ric...    93   2e-17
B9I7A3_POPTR (tr|B9I7A3) Predicted protein OS=Populus trichocarp...    86   3e-15
B9N4M7_POPTR (tr|B9N4M7) Predicted protein OS=Populus trichocarp...    79   5e-13
O04643_ARATH (tr|O04643) F2P16.13 protein OS=Arabidopsis thalian...    60   3e-07

>B9RFF5_RICCO (tr|B9RFF5) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1434180 PE=4 SV=1
          Length = 274

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 114/260 (43%), Gaps = 83/260 (31%)

Query: 39  KVQRNDDDNISTDHQTGPSEAKILKRVDQYFAVLDDHDXXXXXXXXFNRLLQIXXXXXXX 98
           +V RNDDD+    + +  +E+++LKR +                  F ++L+        
Sbjct: 50  EVPRNDDDS----NHSSSAESQLLKRTE------------SDGTSPFRKILETENEEQRK 93

Query: 99  XXXXXXXXXXXXQPNKAEKHLKVSPSLSRLFRKSTSCNNFIKSKNHNI------------ 146
                       +P+KA      S SLSR F K +   N ++ K + I            
Sbjct: 94  ANMEKKANNK--KPSKAG-----SSSLSRFFHKKSCSFNCMRVKINKIDINSSLSTSTSF 146

Query: 147 -------------SPTNVGKIAEAVVGGQASRVAFNRSTSDTMNLQQAPSRISTTHRKLK 193
                        S ++ G++AE ++G Q S          T +L + PSRI TT +KLK
Sbjct: 147 SSTRSSFRFNSQNSCSSTGRVAE-IMGRQGS----------THSLPRVPSRILTTKQKLK 195

Query: 194 MAQSSSNQET-----------------------SEREDRGGEQQELCKKRILMGEKCRPL 230
           MA S +   +                       SE EDRGG   ELCKKRILMG KCRPL
Sbjct: 196 MAHSLTKMGSRRKSRSEDRDECESLIRMESGRKSEWEDRGG-GVELCKKRILMGGKCRPL 254

Query: 231 SYSGTLQYDKDGTLLPDAIP 250
           + SGTLQYDKDG LLPD IP
Sbjct: 255 NNSGTLQYDKDGVLLPDIIP 274


>B9I7A3_POPTR (tr|B9I7A3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_570746 PE=4 SV=1
          Length = 320

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 13/146 (8%)

Query: 115 AEKHLKVSPSLSRLFRKSTSCNNFIKSKN--HNISPTNVGKIAEAVVGGQASRVAFNRST 172
           A+ +LKVS  L   F K TS N F    N  H +     G   +   G   S     R  
Sbjct: 175 ADMYLKVSFPLLSFFSKYTSLNFFRGKPNTDHTVL-RRQGTSHDLHSGVGMSDTPAGRQE 233

Query: 173 SDTMNLQQAPSRISTTHRKLKMAQSSSNQETSER---------EDRGGEQQELCKKRILM 223
           S + NL + PSR+ +T +KL+MA    N   S+          E R    +ELCKKRILM
Sbjct: 234 SSS-NLLRNPSRVLSTDQKLRMASFLGNTTRSQNGGKPVQIGDESREECGEELCKKRILM 292

Query: 224 GEKCRPLSYSGTLQYDKDGTLLPDAI 249
           GEKC+PLS+SG+L YD+DGTLLP+ +
Sbjct: 293 GEKCKPLSFSGSLHYDEDGTLLPEVL 318


>B9N4M7_POPTR (tr|B9N4M7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_784814 PE=4 SV=1
          Length = 253

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 113/272 (41%), Gaps = 52/272 (19%)

Query: 1   MQKRSNGASNIDH--------VXXXXXXXXXFGSIFSSIFNTKKSPK----VQRNDDDNI 48
           MQ+RSNG +  DH        +          G  FSS+F  KK PK    V +N D  +
Sbjct: 1   MQRRSNGCTT-DHTKAKKERVIKPESLLSKKVGVFFSSVFGKKKPPKACSKVHKNGDGYL 59

Query: 49  STDHQTGPSEAKILKRVDQYFAVLDDHDXXXXXXXXFNRLLQIXXXXXXXXXXXXXXXXX 108
                  P+         +Y+A+               +LL+I                 
Sbjct: 60  PFGVALRPASP-------EYYAL--------------KKLLEIAEEEEEEEEEPKVENRE 98

Query: 109 XXQPNKAEKHLKVSPSLSRLFRKSTSCNNFIKSKNHNISPTNVGKIAEAVVGGQASRVAF 168
                 A+ +LKVS      F + TS   F    N     T  G+    + G   S    
Sbjct: 99  NTPSTAADNYLKVSFPFLSFFSRYTSLGFFRGKLN-----TGNGRNHNLLGGVGMSDTLT 153

Query: 169 NRSTSDTMNLQQAPSRISTTHRKLKMAQSSSNQETSEREDRG-----------GEQQELC 217
            R  S +  L  + S +ST  +KLKMA S +  +T+ R+  G              +ELC
Sbjct: 154 ERKDSSSNLLTNSSSVLSTRLQKLKMAGSFA--KTAMRQIGGTSEQVREERREECGEELC 211

Query: 218 KKRILMGEKCRPLSYSGTLQYDKDGTLLPDAI 249
           KKRILMGEKC+PL++SG+L YD+DG LLP+ +
Sbjct: 212 KKRILMGEKCKPLNFSGSLHYDEDGILLPEVL 243


>O04643_ARATH (tr|O04643) F2P16.13 protein OS=Arabidopsis thaliana GN=At5g27020
           PE=2 SV=1
          Length = 164

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 32/38 (84%), Gaps = 2/38 (5%)

Query: 210 GGEQQELCKKRILMGEKCRPLSYSGTLQYDKDGTLLPD 247
           G E++ELCKKRILMGE+C+P+  +G LQYD DG LLP+
Sbjct: 128 GMEEEELCKKRILMGERCKPM--NGVLQYDGDGILLPE 163