Jatropha Genome Database

JcCA0020601.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.20 + phase: 0 
         (228 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5B1X8_VITVI (tr|A5B1X8) Putative uncharacterized protein OS=Vit...   116   1e-24
B9HAL9_POPTR (tr|B9HAL9) Predicted protein OS=Populus trichocarp...   104   6e-21
B9IN06_POPTR (tr|B9IN06) Predicted protein OS=Populus trichocarp...   102   3e-20
C6T413_SOYBN (tr|C6T413) Putative uncharacterized protein OS=Gly...    89   3e-16
D7MHR2_ARALY (tr|D7MHR2) Putative uncharacterized protein OS=Ara...    83   2e-14
O65233_ARATH (tr|O65233) Genomic DNA, chromosome 5, P1 clone:MVP...    82   4e-14
Q8LAK2_ARATH (tr|Q8LAK2) Putative uncharacterized protein OS=Ara...    80   2e-13
C6T8R1_SOYBN (tr|C6T8R1) Putative uncharacterized protein OS=Gly...    78   8e-13

>A5B1X8_VITVI (tr|A5B1X8) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_023571 PE=4 SV=1
          Length = 234

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 111/238 (46%), Gaps = 17/238 (7%)

Query: 3   GQYLSSIKMKRKEXXXXXXXXXXXXXXXPARKIRRLDXXXXXXXXXXXXXXXXXXVFVGG 62
             YLS +KMKRKE               PARKIRRLD                   F   
Sbjct: 2   ASYLS-LKMKRKELEEVNDDFSDFSLSSPARKIRRLDAELPPIMEEEEHDVPVE--FEQL 58

Query: 63  VEEKQ----QPMVDSGVGNQERAIVVFKPVKTNPXXXXXXXXXXXXXXXXXYGIKSQF-- 116
           + EKQ    +  VD    N ERAIV+FKPV + P                  G K++F  
Sbjct: 59  LPEKQVENTREEVDGIPLNAERAIVLFKPVNS-PLMQSPSKFSVSVDSDIISGFKNKFPW 117

Query: 117 -----LRSSCNGNIRLAEEEREATNECMAVVPWVPSQAAFARGIDTSQAEAPDLMEAEQV 171
                LR S        E     TNEC+AVVPWVPS    A G+   Q EA +LME  + 
Sbjct: 118 SSQPNLRKSVEDETASGERNIRVTNECLAVVPWVPSHLPQASGVKVPQIEAVELMEEAEE 177

Query: 172 GEE-TMEIEFEGNNTIQSNELESGGMMSGTQGLPQWQQQHCLIPQLPQNTSTPITWFQ 228
            E  TM+IE    N  Q  E   GG M G++ L QWQQQHC+ PQLPQN STPITWF+
Sbjct: 178 MEVTTMDIEDNNLNPEQQQEHGFGG-MRGSESLHQWQQQHCMTPQLPQNMSTPITWFR 234


>B9HAL9_POPTR (tr|B9HAL9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_819099 PE=4 SV=1
          Length = 264

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 96/174 (55%), Gaps = 22/174 (12%)

Query: 77  NQERAIVVFKPVKT-NPXXXXXXXXXXXXXXXXXYGIKSQFLRSSCNGNIRLAEEEREA- 134
           N+ERAIV+FKPV   +                   G K+Q L SS +G ++  EEE EA 
Sbjct: 91  NEERAIVLFKPVNNLHMLHHSPNDFSVSLDSNIISGFKNQVLWSSQSGQVKPPEEEEEAG 150

Query: 135 --TNECMAVVPWVPSQAAFARGIDTSQAEAP------DLMEAEQVGEETMEIEFEG--NN 184
              +  MAVVPWVPSQA  A  +  + A AP      +LM+ E++GE TM+IE +   NN
Sbjct: 151 ARRDYSMAVVPWVPSQAQHAFAMMDNNASAPQTEGVVELMDFEEMGEATMDIEEDNDTNN 210

Query: 185 TIQSNELES---------GGMMSGTQGLPQWQQQHCLIPQLPQNTS-TPITWFQ 228
             +S EL           GG+ +G  G PQW QQHC++PQ+ QN + TPITWFQ
Sbjct: 211 YSESVELGQAQGNQAFGFGGIRAGNDGFPQWSQQHCMMPQIAQNANPTPITWFQ 264


>B9IN06_POPTR (tr|B9IN06) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_578963 PE=4 SV=1
          Length = 278

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 21/172 (12%)

Query: 77  NQERAIVVFKPVKT-NPXXXXXXXXXXXXXXXXXYGIKSQFLRSSCNGNIRLAEEEREAT 135
           N+ERAIV+FKPV   +                   G ++QFL SS +G +R  EEE E  
Sbjct: 106 NEERAIVLFKPVNNLHLLHRSPNNFSVSLDSNIISGFRNQFLWSSQSGGVRSVEEEEEEA 165

Query: 136 ----NECMAVVPWVPSQA--AFARGIDTSQAEAP--DLMEAEQVGEETMEIEFEGNNT-- 185
               +  MAVVPWVPSQ   AF + I  S A     +LM++E++GE  M+IE + N+   
Sbjct: 166 GARRDNSMAVVPWVPSQTQPAFLQEIMYSNASVAQTELMDSEEMGEAAMDIEEDNNDQNY 225

Query: 186 --------IQSNE-LESGGMMSGTQGLPQWQQQHCLIPQLPQNTS-TPITWF 227
                    Q N+    GG+ +G+ GLPQWQQQHCL+PQ+PQN + TP+TW 
Sbjct: 226 SGSVGLGQAQGNQAFGFGGIRAGSDGLPQWQQQHCLVPQIPQNPNPTPVTWL 277


>C6T413_SOYBN (tr|C6T413) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 199

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 33/201 (16%)

Query: 31  PARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQPMVDSGVGNQERAIVVFKPVKT 90
           PA KIRRLD                    +  + E+ +P++   + N+ERA+V+FKP+  
Sbjct: 25  PATKIRRLDAE------------------LPPIVEEDKPLL---LPNEERALVLFKPL-- 61

Query: 91  NPXXXXXXXXXXXXXXXXXYGIKS-QFLRSS-CNGNIRLAEEEREATNECMAVVPWVPSQ 148
                               GI++ Q+L S  C     L  E RE  N+ +A+VPWVPS 
Sbjct: 62  ---VHSHSSFSLTLDPDLMNGIRNNQYLWSKECERVTEL--ESREKENDELALVPWVPSP 116

Query: 149 AAFAR--GIDTSQAEAPDLMEAEQVGEETMEIEFEGNNTIQSNELESGGMMSGTQG-LPQ 205
           +   +   +D S     +LMEA++ G   M+IE E +  I +    S      T G + +
Sbjct: 117 SYHYQFSPVDDSDNTNAELMEADETGSMMMDIEQEHDTDIDAKISTSSIHYPTTHGGITE 176

Query: 206 WQQQHCLIPQLPQNTSTPITW 226
             QQHCL+PQLP NTSTPITW
Sbjct: 177 GFQQHCLLPQLPHNTSTPITW 197


>D7MHR2_ARALY (tr|D7MHR2) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_493600 PE=4 SV=1
          Length = 223

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 41/239 (17%)

Query: 9   IKMKRKEXXXXXXXXXXXXXXXPARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQ 68
           + MKRK+               PARKIRRLD                    +   EE   
Sbjct: 7   LSMKRKDIDRVNDEFSDFSVSSPARKIRRLDVDLPP---------------IMEEEEVDL 51

Query: 69  PMVDSGVG-------NQERAIVVFKPVKTNPXXXXXXXXXXXXXXXXXYGIKSQFLRSSC 121
           PM D+          N ERAIV+FKP+                      G K++FLR   
Sbjct: 52  PMQDTVAEDIELEPVNDERAIVLFKPLH----YQQPSSGNLFVDRDLISGFKNRFLRDVS 107

Query: 122 NGNIRLAEEEREATNECMAVVPWVPSQAAFARGIDT-SQAEAPDLMEAEQVGEETM---- 176
             +    E++R  +N+C AVV W PSQ+ +++ I T  Q    ++ E ++ GE+ +    
Sbjct: 108 IADDNHYEDQR--SNKCQAVVCWNPSQSTYSQSIGTFQQPRTLEITELDETGEDAVMDEA 165

Query: 177 --EIEFEGNNTIQSNELESGGMMSGTQ--GLPQW-QQQHCLIPQLPQNTST--PITWFQ 228
             EIE +  +T  S   + G     T   GL QW QQQ+C+IPQLPQ ++T  P+TWF+
Sbjct: 166 ANEIEEDSGSTTLSFP-QQGQHQEPTYGFGLHQWQQQQNCMIPQLPQVSTTPAPVTWFR 223


>O65233_ARATH (tr|O65233) Genomic DNA, chromosome 5, P1 clone:MVP2 OS=Arabidopsis
           thaliana GN=At5g35320 PE=2 SV=1
          Length = 225

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 105/240 (43%), Gaps = 41/240 (17%)

Query: 9   IKMKRKEXXXXXXXXXXXXXXXPARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQ 68
           + MKRK+               PARKIRRLD                    +   EE   
Sbjct: 7   LSMKRKDIDRVNDDFSDFSLSSPARKIRRLDVDLPP---------------IMEEEEIDL 51

Query: 69  PMVDSGVG-------NQERAIVVFKPVKTNPXXXXXXXXXXXXXXXXXYGIKSQFLRSSC 121
           PM D+          N ERAIV+FKP+  +                   G K++FLR   
Sbjct: 52  PMQDTVAEEIELEPVNDERAIVLFKPLHYH----QPSSGNVFVDRHLISGFKNRFLRDVS 107

Query: 122 NGNIRLAEEEREATNECMAVVPWVPSQAAFARGIDT-SQAEAPDLMEAEQVGEETM---- 176
             +    E+ER   N+C AVV W PSQ+ +++ I T  Q    ++ E ++ GE+ +    
Sbjct: 108 IADDNQYEDER--LNKCQAVVCWNPSQSTYSQSIGTFQQPRTLEITELDETGEDVVMDDA 165

Query: 177 --EIEFE-GNNTIQSNELESGGMMSGTQ--GLPQWQQ-QHCLIPQLPQ--NTSTPITWFQ 228
             EIE + G+ ++   +         T   GL  WQQ Q+C+IPQLPQ   T TPITWF+
Sbjct: 166 SNEIEEDTGSTSLSFPQQGQQQEQEHTYGFGLHPWQQAQNCMIPQLPQVSTTPTPITWFR 225


>Q8LAK2_ARATH (tr|Q8LAK2) Putative uncharacterized protein OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 225

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 102/247 (41%), Gaps = 55/247 (22%)

Query: 9   IKMKRKEXXXXXXXXXXXXXXXPARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQ 68
           + MKRK+               PARKIRRLD                    +   EE   
Sbjct: 7   LSMKRKDIDRVNDDFSDFSLSSPARKIRRLDVDLPP---------------IMEEEEIDL 51

Query: 69  PMVDSGVG-------NQERAIVVFKPVKTNPXXXXXXXXXXXXXXXXXYGIKSQFLRSSC 121
           PM D+          N ERAIV+FKP+                      G K++FLR   
Sbjct: 52  PMQDTVAEEIELEPVNDERAIVLFKPLH----YQQPSSGNVFVDRHLISGFKNRFLRDVS 107

Query: 122 NGNIRLAEEEREATNECMAVVPWVPSQAAFARGIDT-SQAEAPDLMEAEQVGEETMEIEF 180
             +    E+ER   N+C AVV W PSQ+ +++ I T  Q    ++ E ++ GE+ +  + 
Sbjct: 108 IADDNQYEDER--LNKCQAVVCWNPSQSTYSQSIGTFQQPRTLEITELDETGEDVVMDD- 164

Query: 181 EGNNTIQSNELESGGMMSGTQ----------------GLPQWQQ-QHCLIPQLPQ--NTS 221
                  SNE+E    ++                   GL  WQQ Q+C+IPQLPQ   T 
Sbjct: 165 ------ASNEIEEDTGITSLSFPQQGQQQEQEHTYGFGLHPWQQAQNCMIPQLPQVSATP 218

Query: 222 TPITWFQ 228
           TPITWF+
Sbjct: 219 TPITWFR 225


>C6T8R1_SOYBN (tr|C6T8R1) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 206

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 96/209 (45%), Gaps = 42/209 (20%)

Query: 31  PARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQPMVDSGVGNQERAIVVFKPVKT 90
           PA KIRRLD                    +  + E+ +P+      N+ERA+V+FKP+  
Sbjct: 25  PATKIRRLDAE------------------LPPILEEDEPL-----PNEERALVLFKPLVH 61

Query: 91  NPXXXXXXXXXXXXXXXXXYGIKS-QFLRSS-CNGNIRLAEEEREATNECMAVVPWVPSQ 148
           +P                  GI++ Q+L S  C     L   E E  +E +A+VPWVPS 
Sbjct: 62  SPSSFSLTLDSDLMK-----GIRNNQYLWSKQCECVTELESREEENDDE-LALVPWVPSP 115

Query: 149 AAFARGIDTSQAEAPDLMEAEQVGE------ETMEIEFEGNNTIQSNELESGGMMS---- 198
           +     +D S     +LMEA+++GE        M+IE E +    ++        S    
Sbjct: 116 SYQFSAVDDSLNTNVELMEADEMGEGEGVGSMMMDIEQEDDTDTDTDTDAKTSTSSIHYP 175

Query: 199 -GTQGLPQWQQQHCLIPQLPQNTSTPITW 226
               G+ +  QQHCL+P+LP NTSTPITW
Sbjct: 176 TTHDGITEGFQQHCLLPKLPHNTSTPITW 204