Jatropha Genome Database

JcCA0009731.30
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009731.30 - phase: 0 
         (140 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9IBT8_POPTR (tr|B9IBT8) Predicted protein OS=Populus trichocarp...    82   2e-14
A9P920_POPTR (tr|A9P920) Putative uncharacterized protein OS=Pop...    79   2e-13
B9I9X0_POPTR (tr|B9I9X0) Predicted protein OS=Populus trichocarp...    68   4e-10
C6T3C3_SOYBN (tr|C6T3C3) Putative uncharacterized protein OS=Gly...    56   2e-06

>B9IBT8_POPTR (tr|B9IBT8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_573515 PE=4 SV=1
          Length = 141

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/145 (47%), Positives = 80/145 (55%), Gaps = 12/145 (8%)

Query: 1   MASFWS-FLTMFIIFMAYFASLAFTSHVVHVQFSTISAAPAFXXXXXXXXXXXXXXXXDI 59
           MASF S FL MF +FMAYF+S A TS + HVQFSTISAAPAF                DI
Sbjct: 1   MASFCSIFLAMFTVFMAYFSSPALTSQI-HVQFSTISAAPAF--LHDAPSFSPPTLSPDI 57

Query: 60  EPVFPTTGVAVPSPAEXXXXXXXXXXXXXXXDVIHPAPGPS-MAFSPSGSLPASSATSVN 118
           EP+FPT GV  PSP E               D +  APGP+  + SPSGSLPA S+ S+ 
Sbjct: 58  EPLFPTPGVGAPSPTESSIPTIPSNPSPPNPDDML-APGPAGSSISPSGSLPAYSSVSLT 116

Query: 119 QAA----VYFLGLLLVVFSLMQLSA 139
            +       FLGLL  VF L+Q S 
Sbjct: 117 SSGPLNLAVFLGLL--VFCLVQPSG 139


>A9P920_POPTR (tr|A9P920) Putative uncharacterized protein OS=Populus trichocarpa
           PE=2 SV=1
          Length = 141

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 78/145 (53%), Gaps = 12/145 (8%)

Query: 1   MASFWS-FLTMFIIFMAYFASLAFTSHVVHVQFSTISAAPAFXXXXXXXXXXXXXXXXDI 59
           MAS  S FL MF + MAYF+S A TS + HVQFSTISAAPAF                DI
Sbjct: 1   MASCCSMFLAMFTVLMAYFSSPALTSQI-HVQFSTISAAPAF--LHDAPSFSPPTLSPDI 57

Query: 60  EPVFPTTGVAVPSPAEXXXXXXXXXXXXXXXDVIHPAPGPS-MAFSPSGSLPASSATSVN 118
           EP+FPT GV  PSP E               D +  APGP+  + SPSGSLPA S+ S+ 
Sbjct: 58  EPLFPTPGVGAPSPTESSITTIPSNPSPPNPDDML-APGPAGSSISPSGSLPAYSSMSLT 116

Query: 119 QAA----VYFLGLLLVVFSLMQLSA 139
            +       FLGLL  VF L+Q S 
Sbjct: 117 SSGPLNLAVFLGLL--VFCLVQPSG 139


>B9I9X0_POPTR (tr|B9I9X0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_572749 PE=4 SV=1
          Length = 140

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 75/146 (51%), Gaps = 14/146 (9%)

Query: 1   MASFWS-FLTMFIIFMAYFASLAFTSHVVHVQFSTISAAPAFXXXXXXXXXXXXXXXXDI 59
           MASF S FL M  +FMA+F+S A  S + H + STISAAPAF                DI
Sbjct: 1   MASFCSTFLAMSTVFMAFFSSPALASQI-HARISTISAAPAF--LPVAPLSSPPTLSPDI 57

Query: 60  EPVFPTTGVAVPSPAEXXXXX-XXXXXXXXXXDVIHPAPGPSM-AFSPSGSLPASSATSV 117
           EP+ PT G   PSP E                D++  APGP+  + SPSGSLPASS+ S 
Sbjct: 58  EPLLPTPGAGAPSPTESSLPTIPSSRSPPNPGDIL--APGPARFSISPSGSLPASSSVST 115

Query: 118 NQAA----VYFLGLLLVVFSLMQLSA 139
             +      +FLGLL  V   MQLS 
Sbjct: 116 TSSGPLNLAFFLGLL--VLCSMQLSG 139


>C6T3C3_SOYBN (tr|C6T3C3) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 140

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 6/140 (4%)

Query: 1   MASFWSFLTMFIIFMAYFASLAFTSHVVHVQFSTISAAPAFXXXXXXXXXXXXXXXXDIE 60
           MASFW FL MF+  MA   S   ++    +  STISAAP                  DIE
Sbjct: 1   MASFWPFLAMFMALMACNCSSLASASRQSMHVSTISAAPT--TLPGAPLYYSPTMSPDIE 58

Query: 61  PVFPTTGVAVPSPAEXXXXXXXXXXXXXXXDVIHPAPGPSMAFSPSGSLPASSATSVNQA 120
           P+FPT G +  SP+E               DV + +PG  +AF PS S+PA + +S   +
Sbjct: 59  PLFPTPGGSAFSPSESSIPTIPSSPSPPNPDVTN-SPGSVLAFPPSESMPAMAPSSKGAS 117

Query: 121 AVYFLGL---LLVVFSLMQL 137
              +  L   +LV+  +MQL
Sbjct: 118 LPVYSVLHLAILVIICIMQL 137