Jatropha Genome Database

JcCA0006671.80
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.80 + phase: 0 
         (134 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RQN7_RICCO (tr|B9RQN7) Peroxidase 57, putative OS=Ricinus comm...    90   1e-16
D7U0J3_VITVI (tr|D7U0J3) Whole genome shotgun sequence of line P...    72   2e-11
B9GG21_POPTR (tr|B9GG21) Predicted protein OS=Populus trichocarp...    60   7e-08
D7TAA8_VITVI (tr|D7TAA8) Whole genome shotgun sequence of line P...    57   9e-07

>B9RQN7_RICCO (tr|B9RQN7) Peroxidase 57, putative OS=Ricinus communis
           GN=RCOM_1494500 PE=4 SV=1
          Length = 437

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 1   MANPIFQGGSMRKLFLFLAIFCVLISLKNKNGKI----ENGKXXXXXXXXXXXXWDLYPS 56
           M N IF+  +M+K+ + + I C+LIS +N+  +I    E  K            WDL PS
Sbjct: 1   MVNSIFEIANMKKMTVLVFIICILISFRNQTKEIMIHNEEIKESFEEYYYTSSSWDLLPS 60

Query: 57  IFLSVEYEEKGANPYP-SLEYDFYRDSCPQXXXXXXXXXXXXCKTQSNVAPALLRLAFHD 115
            FLS E E   A+P   SLEYDFYR+SCPQ             K + +V+PALLRL FHD
Sbjct: 61  FFLSNEQE---AHPQTRSLEYDFYRNSCPQAEKIIQNVVRELYKVKFSVSPALLRLVFHD 117

Query: 116 CFI 118
           CFI
Sbjct: 118 CFI 120


>D7U0J3_VITVI (tr|D7U0J3) Whole genome shotgun sequence of line PN40024,
           scaffold_2.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00017084001 PE=4 SV=1
          Length = 404

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 6/115 (5%)

Query: 5   IFQGGSMRKLFLFLAIFCVLISLKNKNGKIENGKXXXXXXXXXXXXWDLYPSIFLSVEYE 64
           +F+  ++RKL   + + C+LISLKN N + +N                   SIF      
Sbjct: 8   VFETHTLRKLSFLVFLLCILISLKNHNAETKNSLQTARLPPPDSS------SIFSRRLSL 61

Query: 65  EKGANPYPSLEYDFYRDSCPQXXXXXXXXXXXXCKTQSNVAPALLRLAFHDCFIE 119
                   SLEYDFYR+SCP              + + NVAPALLRL FHDCFIE
Sbjct: 62  SANFGDSRSLEYDFYRNSCPPAEQIIRTMIRRLYEVRPNVAPALLRLVFHDCFIE 116


>B9GG21_POPTR (tr|B9GG21) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_751771 PE=4 SV=1
          Length = 309

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 31/47 (65%)

Query: 73  SLEYDFYRDSCPQXXXXXXXXXXXXCKTQSNVAPALLRLAFHDCFIE 119
           SLEYDFYRDSCP+             +  S+VAPALLRL FHDCFIE
Sbjct: 15  SLEYDFYRDSCPEAERIIRRVVHELYEVNSSVAPALLRLVFHDCFIE 61


>D7TAA8_VITVI (tr|D7TAA8) Whole genome shotgun sequence of line PN40024,
           scaffold_10.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00010156001 PE=4 SV=1
          Length = 375

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 29/48 (60%)

Query: 72  PSLEYDFYRDSCPQXXXXXXXXXXXXCKTQSNVAPALLRLAFHDCFIE 119
           PSLEYDFYR+SCP+                S+  PALLRL FHDCFI+
Sbjct: 46  PSLEYDFYRNSCPKAESIVRSSMAQIFAAHSDTPPALLRLLFHDCFIQ 93