Jatropha Genome Database

JcPR04G356P.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04G356P.10 + phase: 0 /pseudo/partial
         (104 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01012141001 assembled CDS                                        99   5e-22
GSVIVT01015882001 assembled CDS                                        94   2e-20
GSVIVT01036734001 assembled CDS                                        88   9e-19
GSVIVT01014337001 assembled CDS                                        84   1e-17
GSVIVT01026250001 assembled CDS                                        79   3e-16
GSVIVT01036729001 assembled CDS                                        78   9e-16
GSVIVT01026252001 assembled CDS                                        75   5e-15
GSVIVT01015884001 assembled CDS                                        74   1e-14
GSVIVT01035402001 assembled CDS                                        72   5e-14
GSVIVT01026255001 assembled CDS                                        70   2e-13
GSVIVT01024696001 assembled CDS                                        55   6e-09

>GSVIVT01012141001 assembled CDS
          Length = 522

 Score = 98.6 bits (244), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 59/70 (84%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           QAKFKSKAVA MV+FFSLTTP GIA+G+GIS +Y+E+SP AL+VEG+ NSAS+G      
Sbjct: 421 QAKFKSKAVAVMVVFFSLTTPVGIAVGMGISNIYDENSPKALVVEGVFNSASAGILIYMA 480

Query: 74  LVDLLASDFL 83
           LVDL+A+DF+
Sbjct: 481 LVDLVAADFM 490



 Score = 97.8 bits (242), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 60/70 (85%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           QAK+K KA   MV+FFSLTTP+GIA+G+GISK+Y+E+SPTALIV+G+LNSAS+G      
Sbjct: 107 QAKYKIKATIIMVLFFSLTTPTGIAVGLGISKIYDENSPTALIVQGVLNSASAGILIYMA 166

Query: 74  LVDLLASDFL 83
           LVDLLA+DF+
Sbjct: 167 LVDLLATDFM 176


>GSVIVT01015882001 assembled CDS
          Length = 165

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 58/72 (80%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QAKFK +A A M +FFSLTTP GIAIGIGIS VY+E+S TALIVEG+ N+AS+G    
Sbjct: 62  IVQAKFKLRAAAIMALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAASAGILVY 121

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 122 MALVDLLAADFM 133


>GSVIVT01036734001 assembled CDS
          Length = 220

 Score = 87.8 bits (216), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           QAKF+   +A MV+FFS+TTP GI +GIGIS++Y+E+ PTALIVEG+ ++AS+G      
Sbjct: 119 QAKFRFSTMAMMVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMA 178

Query: 74  LVDLLASDFL 83
           LVDLLA+DF+
Sbjct: 179 LVDLLAADFM 188


>GSVIVT01014337001 assembled CDS
          Length = 354

 Score = 84.0 bits (206), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 57/72 (79%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++K++  A MV FFS+TTP GIA+GIG+SKVY++ SPTALIV G+LN+ S+G    
Sbjct: 251 ILQAEYKARTKAIMVFFFSVTTPLGIALGIGLSKVYSDDSPTALIVVGVLNATSAGLLNY 310

Query: 72  WLLVDLLASDFL 83
             LVDLL +DF+
Sbjct: 311 MALVDLLGADFM 322


>GSVIVT01026250001 assembled CDS
          Length = 349

 Score = 79.3 bits (194), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 56/72 (77%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++K+K  A MV FFS+TTP GIA+GIG+S VY+++SP +LIV G+LN+ S G    
Sbjct: 246 LLQAEYKAKMKAIMVFFFSVTTPFGIALGIGLSHVYSDNSPASLIVVGVLNATSGGLLNY 305

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 306 MALVDLLAADFM 317


>GSVIVT01036729001 assembled CDS
          Length = 192

 Score = 77.8 bits (190), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 49/59 (83%)

Query: 25 MVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWLLVDLLASDFL 83
          MV+FFS+TTP GI +GIGIS++Y+E+ PTALIVEG+ ++AS+G      LVDLLA+DF+
Sbjct: 1  MVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMALVDLLAADFM 59


>GSVIVT01026252001 assembled CDS
          Length = 348

 Score = 75.5 bits (184), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 54/72 (75%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++K    A MV FFS+TTP GIA+GI +SK Y E+SPT+LI  GLLN++S+G    
Sbjct: 245 ILQAEYKFVKKAWMVFFFSVTTPFGIALGIALSKTYKENSPTSLISVGLLNASSAGLLIY 304

Query: 72  WLLVDLLASDFL 83
             LVDLL++DF+
Sbjct: 305 MALVDLLSADFM 316


>GSVIVT01015884001 assembled CDS
          Length = 340

 Score = 73.9 bits (180), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 58/72 (80%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QAKFKS+A   M +FFSLTTP GI IGIGIS+VY+E+S TALI+EG+ N+AS+G    
Sbjct: 237 IVQAKFKSRAATIMGLFFSLTTPVGIGIGIGISQVYDENSSTALIIEGIFNAASAGILIY 296

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 297 MALVDLLAADFM 308


>GSVIVT01035402001 assembled CDS
          Length = 353

 Score = 72.0 bits (175), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 47/70 (67%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           QA+FK+ +   M  FF++TTP+GIA G  IS  YN  SP AL++EG+ +  S+G      
Sbjct: 252 QAQFKTLSTTLMACFFAITTPAGIAFGTAISSSYNPDSPRALVIEGIFDCVSAGILIYMA 311

Query: 74  LVDLLASDFL 83
           LVDL+A+DFL
Sbjct: 312 LVDLIAADFL 321


>GSVIVT01026255001 assembled CDS
          Length = 114

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 51/70 (72%)

Query: 14 QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
          QA++K      MV FFS+TTP GIA+GI +SK Y ++SPT+LI  GLLN++S+G      
Sbjct: 13 QAEYKFLKKVLMVFFFSVTTPFGIALGIALSKTYKDNSPTSLITVGLLNASSAGLLIHMA 72

Query: 74 LVDLLASDFL 83
          LVDLL+++F+
Sbjct: 73 LVDLLSAEFM 82


>GSVIVT01024696001 assembled CDS
          Length = 335

 Score = 55.5 bits (132), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGI--SKVYNESSPTALIVEGLLNSASSGS* 69
           + QA F     A M   F++TTP GI +G+ I  +  Y++SS  ALI+EGLL S SSG  
Sbjct: 229 IAQAGFNFGTTAYMCFMFAVTTPMGIVLGMIIFSATGYDDSSANALIMEGLLGSLSSGIL 288

Query: 70  FIWLLVDLLASDFLE 84
               LVDL+A DF  
Sbjct: 289 IYMALVDLIAVDFFH 303