Jatropha Genome Database
- JcCD0138510.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCD0138510.10 + phase: 0 /pseudo/partial
(72 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01027577001 assembled CDS 74 1e-14
GSVIVT01018450001 assembled CDS 70 3e-13
GSVIVT01008139001 assembled CDS 66 3e-12
GSVIVT01036551001 assembled CDS 66 3e-12
GSVIVT01010521001 assembled CDS 66 4e-12
GSVIVT01012249001 assembled CDS 65 5e-12
GSVIVT01021303001 assembled CDS 64 2e-11
GSVIVT01000802001 assembled CDS 64 2e-11
GSVIVT01027579001 assembled CDS 63 2e-11
GSVIVT01018446001 assembled CDS 63 3e-11
GSVIVT01025945001 assembled CDS 62 5e-11
GSVIVT01019883001 assembled CDS 60 2e-10
GSVIVT01008140001 assembled CDS 59 4e-10
GSVIVT01036549001 assembled CDS 59 5e-10
GSVIVT01003864001 assembled CDS 58 7e-10
GSVIVT01003861001 assembled CDS 58 7e-10
GSVIVT01033253001 assembled CDS 58 1e-09
GSVIVT01012250001 assembled CDS 58 1e-09
GSVIVT01005934001 assembled CDS 57 1e-09
GSVIVT01008560001 assembled CDS 57 2e-09
GSVIVT01009171001 assembled CDS 56 3e-09
GSVIVT01038474001 assembled CDS 55 8e-09
GSVIVT01033067001 assembled CDS 55 8e-09
GSVIVT01009219001 assembled CDS 54 1e-08
GSVIVT01015641001 assembled CDS 54 2e-08
GSVIVT01011300001 assembled CDS 53 2e-08
GSVIVT01001437001 assembled CDS 53 3e-08
GSVIVT01025916001 assembled CDS 53 3e-08
GSVIVT01012110001 assembled CDS 52 4e-08
GSVIVT01019630001 assembled CDS 52 6e-08
GSVIVT01001701001 assembled CDS 52 6e-08
GSVIVT01002442001 assembled CDS 51 8e-08
GSVIVT01019167001 assembled CDS 50 3e-07
GSVIVT01026207001 assembled CDS 49 5e-07
GSVIVT01022182001 assembled CDS 49 6e-07
GSVIVT01019180001 assembled CDS 48 8e-07
GSVIVT01009393001 assembled CDS 47 2e-06
GSVIVT01008980001 assembled CDS 47 3e-06
GSVIVT01000175001 assembled CDS 45 7e-06
>GSVIVT01027577001 assembled CDS
Length = 244
Score = 73.9 bits (180), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
>GSVIVT01018450001 assembled CDS
Length = 249
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/35 (91%), Positives = 34/35 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEV LIIFSSRGKL+EFGS+G
Sbjct: 27 GLLKKAYELSVLCDAEVCLIIFSSRGKLFEFGSSG 61
>GSVIVT01008139001 assembled CDS
Length = 246
Score = 66.2 bits (160), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALI+FSSRGKLYEF S
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSSRGKLYEFCSG 60
>GSVIVT01036551001 assembled CDS
Length = 243
Score = 66.2 bits (160), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60
>GSVIVT01010521001 assembled CDS
Length = 242
Score = 65.9 bits (159), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>GSVIVT01012249001 assembled CDS
Length = 243
Score = 65.5 bits (158), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSG 60
>GSVIVT01021303001 assembled CDS
Length = 226
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 59
>GSVIVT01000802001 assembled CDS
Length = 363
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 116 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 148
>GSVIVT01027579001 assembled CDS
Length = 218
Score = 63.2 bits (152), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA+ELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 27 GLFKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
>GSVIVT01018446001 assembled CDS
Length = 203
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEVA+IIFS +G+LYEF S+
Sbjct: 20 GLLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSN 54
>GSVIVT01025945001 assembled CDS
Length = 233
Score = 62.0 bits (149), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FSSRG++YE+ +
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSSRGRVYEYSN 59
>GSVIVT01019883001 assembled CDS
Length = 207
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKA+ELSVLCDAEVALIIFS RGK++EF S+
Sbjct: 20 GLLKKAFELSVLCDAEVALIIFSPRGKVFEFSSSS 54
>GSVIVT01008140001 assembled CDS
Length = 243
Score = 59.3 bits (142), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVALI+FS++GKLYE+ +
Sbjct: 27 GLLKKAHEISVLCDAEVALIVFSTKGKLYEYST 59
>GSVIVT01036549001 assembled CDS
Length = 247
Score = 58.9 bits (141), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ S
Sbjct: 27 GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSS 59
>GSVIVT01003864001 assembled CDS
Length = 224
Score = 58.2 bits (139), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA EL++LCDAEV LIIFSS GKLYEF S
Sbjct: 27 GLLKKAKELAILCDAEVGLIIFSSTGKLYEFAS 59
>GSVIVT01003861001 assembled CDS
Length = 224
Score = 58.2 bits (139), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA EL++LCDAEV LIIFSS GKLYEF S
Sbjct: 27 GLLKKAKELAILCDAEVGLIIFSSTGKLYEFAS 59
>GSVIVT01033253001 assembled CDS
Length = 181
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA ELSVLCDAEV +IIFSS GKLYEF S+
Sbjct: 27 GLLKKAKELSVLCDAEVGVIIFSSTGKLYEFSSS 60
>GSVIVT01012250001 assembled CDS
Length = 241
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ +
Sbjct: 27 GLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
>GSVIVT01005934001 assembled CDS
Length = 227
Score = 57.4 bits (137), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELSVLCDA+VALIIFSS GKL+EF S+
Sbjct: 27 GLFKKAEELSVLCDADVALIIFSSTGKLFEFSSS 60
>GSVIVT01008560001 assembled CDS
Length = 235
Score = 56.6 bits (135), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+ELS+LCDAEVAL+IFS GK Y+F S
Sbjct: 27 GLLKKAFELSILCDAEVALLIFSPSGKAYQFAS 59
>GSVIVT01009171001 assembled CDS
Length = 226
Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELSVLCDAEVALIIFSS GKL+++ S+
Sbjct: 27 GLFKKAEELSVLCDAEVALIIFSSTGKLFDYSSS 60
>GSVIVT01038474001 assembled CDS
Length = 237
Score = 54.7 bits (130), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA ELS+LCDAEV L+IFSS GKLY++ +
Sbjct: 27 GLLKKAKELSILCDAEVGLVIFSSTGKLYDYAN 59
>GSVIVT01033067001 assembled CDS
Length = 205
Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 30/31 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
G++KKA+ELS+LCD ++ALIIFS+RG+LYEF
Sbjct: 27 GMMKKAHELSILCDVDLALIIFSARGRLYEF 57
>GSVIVT01009219001 assembled CDS
Length = 240
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA EL++LCDAEV +IIFSS GKLY++ S
Sbjct: 27 GLLKKAKELAILCDAEVGVIIFSSTGKLYDYAS 59
>GSVIVT01015641001 assembled CDS
Length = 217
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS LCDAE+ALI+FS+ GKL+E+ S+
Sbjct: 27 GLFKKAQELSTLCDAEIALIVFSAAGKLFEYSSS 60
>GSVIVT01011300001 assembled CDS
Length = 180
Score = 53.1 bits (126), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GL KKA ELS+LCDAE+ALI+FS+ GKL+E+ S+
Sbjct: 27 GLFKKAQELSILCDAEIALIVFSAAGKLFEYSSSS 61
>GSVIVT01001437001 assembled CDS
Length = 248
Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA EL++LCDA+V +IIFS+ GKL+EF S
Sbjct: 27 GLLKKASELAILCDAQVGVIIFSNTGKLFEFSS 59
>GSVIVT01025916001 assembled CDS
Length = 198
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKA ELSVLCDAE+ + IFS+ GKLYE + G
Sbjct: 27 GLLKKAKELSVLCDAEIGIFIFSAHGKLYELATKG 61
>GSVIVT01012110001 assembled CDS
Length = 256
Score = 52.4 bits (124), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL KKA+ELSVLCDA++ LIIFSS GKL E+ S
Sbjct: 27 GLFKKAHELSVLCDAQIGLIIFSSTGKLSEYCS 59
>GSVIVT01019630001 assembled CDS
Length = 596
Score = 52.0 bits (123), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKK +ELSVLCDA++ LIIFS+ GK++E+ S
Sbjct: 27 GLLKKTHELSVLCDAQIGLIIFSNTGKMFEYCS 59
>GSVIVT01001701001 assembled CDS
Length = 218
Score = 52.0 bits (123), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS LCDAE+ LI+FS+ GKL+E+ S+
Sbjct: 27 GLFKKALELSTLCDAEIELIVFSAAGKLFEYSSS 60
>GSVIVT01002442001 assembled CDS
Length = 110
Score = 51.2 bits (121), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS LCDAE+ALI+FS+ GKL+E+ S+
Sbjct: 51 GLFKKAQELSTLCDAEIALIVFSAAGKLFEYSSS 84
>GSVIVT01019167001 assembled CDS
Length = 86
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELS LCD E+ALI+FS+ GKL+E+ S+
Sbjct: 27 GLFKKAQELSTLCDGEIALIVFSAAGKLFEYSSS 60
>GSVIVT01026207001 assembled CDS
Length = 218
Score = 48.9 bits (115), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
GLLKK +ELSVLCD ++ LIIFSS GK+ E+
Sbjct: 27 GLLKKTHELSVLCDVQIGLIIFSSTGKMCEY 57
>GSVIVT01022182001 assembled CDS
Length = 338
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
GL+KKAYELSVLCD ++ALI+FS G+L F
Sbjct: 27 GLIKKAYELSVLCDIDIALIMFSHSGRLSHF 57
>GSVIVT01019180001 assembled CDS
Length = 136
Score = 48.1 bits (113), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 28/31 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
GL KKA ++S+LCDAE+ALI+FS+ GKL+E+
Sbjct: 77 GLFKKAQDISILCDAEIALIVFSAAGKLFEY 107
>GSVIVT01009393001 assembled CDS
Length = 322
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
GL+KKAYELSVLCD +VALI+FS G++ F
Sbjct: 27 GLIKKAYELSVLCDVDVALIMFSPSGRVSLF 57
>GSVIVT01008980001 assembled CDS
Length = 97
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 32
GL+KKAYELSVLCD ++ALI+F G+L +F
Sbjct: 27 GLIKKAYELSVLCDIDIALIMFPPSGRLTQFS 58
>GSVIVT01000175001 assembled CDS
Length = 62
Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 32
GLLKKAYE+S LCD EVAL+ FS GK FG
Sbjct: 27 GLLKKAYEISTLCDIEVALLAFSPSGKPTIFG 58