Jatropha Genome Database

JcCB0969631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0969631.10 + phase: 1 /partial
         (71 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01013471001 assembled CDS                                       132   5e-32
GSVIVT01023837001 assembled CDS                                       126   2e-30
GSVIVT01034552001 assembled CDS                                       121   8e-29
GSVIVT01035830001 assembled CDS                                       109   2e-25
GSVIVT01022285001 assembled CDS                                       108   3e-25
GSVIVT01032096001 assembled CDS                                       108   6e-25
GSVIVT01028402001 assembled CDS                                       106   2e-24
GSVIVT01033297001 assembled CDS                                       106   2e-24
GSVIVT01023643001 assembled CDS                                       102   3e-23
GSVIVT01021248001 assembled CDS                                        93   3e-20
GSVIVT01028234001 assembled CDS                                        70   1e-13
GSVIVT01021798001 assembled CDS                                        57   2e-09
GSVIVT01024398001 assembled CDS                                        55   8e-09
GSVIVT01028071001 assembled CDS                                        55   9e-09
GSVIVT01023850001 assembled CDS                                        54   2e-08
GSVIVT01013057001 assembled CDS                                        53   2e-08

>GSVIVT01013471001 assembled CDS
          Length = 969

 Score =  132 bits (331), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/68 (89%), Positives = 64/68 (94%)

Query: 4   ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWG 63
           EN A+M E KLEKKFGQSPVFVASTLLE+GG+LK ASPASLLKEAIHVISCGYEDKTEWG
Sbjct: 719 ENVALMSEQKLEKKFGQSPVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTEWG 778

Query: 64  KEVGWIYG 71
           KEVGWIYG
Sbjct: 779 KEVGWIYG 786


>GSVIVT01023837001 assembled CDS
          Length = 935

 Score =  126 bits (317), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/68 (85%), Positives = 63/68 (92%)

Query: 4   ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWG 63
           E + ++ E KLEKKFGQSPVFVASTLLEDGG+LK ASPASLLKEAIHVISCGYEDKT+WG
Sbjct: 722 EKSTMLSETKLEKKFGQSPVFVASTLLEDGGTLKIASPASLLKEAIHVISCGYEDKTDWG 781

Query: 64  KEVGWIYG 71
           KEVGWIYG
Sbjct: 782 KEVGWIYG 789


>GSVIVT01034552001 assembled CDS
          Length = 1067

 Score =  121 bits (303), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/71 (77%), Positives = 64/71 (90%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           I+++ + +MP+ K EKKFGQSPVF+ASTLLE+GG  KGA+ ASLLKEAIHVISCGYEDKT
Sbjct: 722 IDNDRSLLMPQVKFEKKFGQSPVFIASTLLEEGGVPKGATTASLLKEAIHVISCGYEDKT 781

Query: 61  EWGKEVGWIYG 71
           EWGKEVGWIYG
Sbjct: 782 EWGKEVGWIYG 792


>GSVIVT01035830001 assembled CDS
          Length = 921

 Score =  109 bits (273), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 58/70 (82%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQSPVF+A+T +E GG     +PA+LLKEAIHVISCGYEDKT+
Sbjct: 710 DDEKSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTD 769

Query: 62  WGKEVGWIYG 71
           WGKE+GWIYG
Sbjct: 770 WGKEIGWIYG 779


>GSVIVT01022285001 assembled CDS
          Length = 1097

 Score =  108 bits (271), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/71 (73%), Positives = 58/71 (81%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           I  E A+    ++LEKKFGQSPVF+ASTLLE+GG    A PASLLKEAI VISCGYEDKT
Sbjct: 723 IYTEQASKTSPDELEKKFGQSPVFIASTLLENGGIPDEARPASLLKEAIQVISCGYEDKT 782

Query: 61  EWGKEVGWIYG 71
           +WGKEVGWIYG
Sbjct: 783 DWGKEVGWIYG 793


>GSVIVT01032096001 assembled CDS
          Length = 929

 Score =  108 bits (269), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/70 (67%), Positives = 60/70 (85%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQS VFVASTL+E+GG  + A+P +LLKEAIHVISCGYEDK+E
Sbjct: 707 DDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAAPETLLKEAIHVISCGYEDKSE 766

Query: 62  WGKEVGWIYG 71
           WG+E+GWIYG
Sbjct: 767 WGREIGWIYG 776


>GSVIVT01028402001 assembled CDS
          Length = 1000

 Score =  106 bits (265), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/70 (64%), Positives = 58/70 (82%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           E E +++M +   EK+FGQSPVF+ STL+EDGG  +G +  +L+KEAIHVISCGYE+KTE
Sbjct: 627 ELEKSSLMSQKNFEKRFGQSPVFITSTLMEDGGLPEGTNSTALIKEAIHVISCGYEEKTE 686

Query: 62  WGKEVGWIYG 71
           WGKE+GWIYG
Sbjct: 687 WGKEIGWIYG 696


>GSVIVT01033297001 assembled CDS
          Length = 1243

 Score =  106 bits (265), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/70 (67%), Positives = 58/70 (82%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQS VFVASTL+E+GG  + A+P  LLKEAIHVISCGYEDKT+
Sbjct: 869 DDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAAPEILLKEAIHVISCGYEDKTD 928

Query: 62  WGKEVGWIYG 71
           WG E+GWIYG
Sbjct: 929 WGNEIGWIYG 938


>GSVIVT01023643001 assembled CDS
          Length = 1037

 Score =  102 bits (254), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/71 (63%), Positives = 56/71 (78%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           +E++   +M +   EKKFGQS +FV STL+E GG    +SPA+LLKEAIHVISCGYEDKT
Sbjct: 662 LEEDKEMLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPAALLKEAIHVISCGYEDKT 721

Query: 61  EWGKEVGWIYG 71
           +WG E+GWIYG
Sbjct: 722 DWGLELGWIYG 732


>GSVIVT01021248001 assembled CDS
          Length = 983

 Score = 92.8 bits (229), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/70 (58%), Positives = 53/70 (75%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           E E + ++ +   EK FG S VF+ STL+E+GG  + A+   L+KEAIHVISCGYE+KTE
Sbjct: 607 EHERSLLISQMSFEKTFGLSSVFIESTLMENGGVPESANSPILIKEAIHVISCGYEEKTE 666

Query: 62  WGKEVGWIYG 71
           WGKE+GWIYG
Sbjct: 667 WGKEIGWIYG 676


>GSVIVT01028234001 assembled CDS
          Length = 904

 Score = 70.5 bits (171), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/58 (53%), Positives = 40/58 (68%)

Query: 14  LEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           +E  FGQ+P+ +AS  ++D      A+   +L+ AIHVISC YEDKT WG EVGWIYG
Sbjct: 501 MEMCFGQAPLLIASNFVDDDIFSSYATIEEILRAAIHVISCDYEDKTAWGIEVGWIYG 558


>GSVIVT01021798001 assembled CDS
          Length = 1035

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 20/82 (24%)

Query: 10  PENKLEKKFGQSPVFVASTL--------LEDGGSLK-GASPASLL-----------KEAI 49
           P+  L KKFG S +F  S          L D  S+K G  P +LL            EA+
Sbjct: 652 PDLDLPKKFGNSSLFTESIAVAEFQGRPLADHLSVKNGRPPGALLVPRPPLDAPTVAEAV 711

Query: 50  HVISCGYEDKTEWGKEVGWIYG 71
            VISC YED TEWG  +GWIYG
Sbjct: 712 AVISCWYEDNTEWGDRIGWIYG 733


>GSVIVT01024398001 assembled CDS
          Length = 954

 Score = 54.7 bits (130), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 10/75 (13%)

Query: 4   ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASP-------ASLLKEAIHVISCGY 56
           E+   M  + L K+FG S   + S      G   GA         AS + EAI VISC Y
Sbjct: 690 EHHPEMSLSLLPKRFGNSNFLIDSI---PNGRPPGALTIPRELLDASTVAEAISVISCWY 746

Query: 57  EDKTEWGKEVGWIYG 71
           EDKTEWG  VGWIYG
Sbjct: 747 EDKTEWGNRVGWIYG 761


>GSVIVT01028071001 assembled CDS
          Length = 845

 Score = 54.7 bits (130), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 42  ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           A+ + EAI VISC YEDKTEWGK VGWIYG
Sbjct: 578 AATVAEAISVISCFYEDKTEWGKRVGWIYG 607


>GSVIVT01023850001 assembled CDS
          Length = 935

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 20/80 (25%)

Query: 12  NKLEKKFGQSPVFVASTL--------LEDGGSLK-GASP-----------ASLLKEAIHV 51
           N L K+FG S +   S          L D  ++K G  P           AS + EA+ V
Sbjct: 624 NLLPKRFGNSTLLAESIPIAEFQARPLADHPAIKYGRRPGALRQPREPLDASAVAEAVSV 683

Query: 52  ISCGYEDKTEWGKEVGWIYG 71
           ISC YEDKTEWG  VGWIYG
Sbjct: 684 ISCWYEDKTEWGDRVGWIYG 703


>GSVIVT01013057001 assembled CDS
          Length = 927

 Score = 53.1 bits (126), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 42  ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           A+ + EAI VISC YEDKTEWG+ VGWIYG
Sbjct: 714 AATVAEAISVISCWYEDKTEWGQRVGWIYG 743