Jatropha Genome Database
- JcCB0968951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0968951.10 - phase: 0
(250 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01037851001 assembled CDS 95 4e-20
GSVIVT01014844001 assembled CDS 79 3e-15
GSVIVT01012197001 assembled CDS 77 1e-14
GSVIVT01018162001 assembled CDS 77 1e-14
GSVIVT01018161001 assembled CDS 75 3e-14
GSVIVT01011505001 assembled CDS 66 1e-11
GSVIVT01016182001 assembled CDS 65 3e-11
GSVIVT01031461001 assembled CDS 62 2e-10
GSVIVT01037363001 assembled CDS 62 3e-10
GSVIVT01033678001 assembled CDS 59 2e-09
GSVIVT01037364001 assembled CDS 54 6e-08
GSVIVT01023887001 assembled CDS 52 3e-07
GSVIVT01007927001 assembled CDS 47 7e-06
>GSVIVT01037851001 assembled CDS
Length = 161
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 27/123 (21%)
Query: 1 MALDALNSPTTATPSFQFEDSSGLHSYLAEPWTKRKRSKRSHHQ--PTEEEYLALCLVML 58
MAL+ALNSPTT +P+F+FE++ LHS EPWTKRKRS+R + TEEEYLALCL+ML
Sbjct: 1 MALEALNSPTTMSPTFKFEEAE-LHSL--EPWTKRKRSRRPRFENPSTEEEYLALCLIML 57
Query: 59 ARGXXXXXXXXXXXXXXXXXXPTPSRQIPAALNNSEEKPSYKCSVCNKAFSSYQALGGHK 118
ARG P Q P +++CS+C++ F + QALGGHK
Sbjct: 58 ARGGATTREE-------------PQGQPPE---------THECSICHRTFPTGQALGGHK 95
Query: 119 ASH 121
H
Sbjct: 96 RCH 98
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 43/95 (45%), Gaps = 40/95 (42%)
Query: 150 KTHECSLCHKCFPTGQALGGHKRCHYEGGSAAAEKXXXXXXXXXXXXXXXHSLSQSQREF 209
+THECS+CH+ FPTGQALGGHKRCHY+GGS+ +
Sbjct: 74 ETHECSICHRTFPTGQALGGHKRCHYDGGSSGVTQTGV---------------------- 111
Query: 210 DLNLPALPEFAADFFISGDDEVMSPLPVKKPRLLV 244
+ EV SPLP KKPR L
Sbjct: 112 ------------------EQEVESPLPAKKPRFLF 128
>GSVIVT01014844001 assembled CDS
Length = 461
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 80 PTPSRQIPAALNNSEEKPSYKCSVCNKAFSSYQALGGHKASHRKLAGNE--DQXXXXXXX 137
P ++Q+P + Y+CS CNK+F ++QALGGH++SH K ++ D
Sbjct: 307 PEEAKQVPTTPDR------YRCSTCNKSFPTHQALGGHRSSHNKFKNSQTMDDSASHEAL 360
Query: 138 XXXXXXVSNGS--GKTHECSLCHKCFPTGQALGGHKRCHYEGGSAA 181
+ S TH+C C+K FPTGQALGGH RCH+ G S A
Sbjct: 361 GCNDAAAALASMLSTTHQCKCCNKTFPTGQALGGHMRCHWNGPSEA 406
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 101 CSVCNKAFSSYQALGGHKASHRKLAGNEDQXXXXXXXXXXXXXVSNGSGKTHE------C 154
CSVC + FSS +ALGGH H + + ED+ V NG G T C
Sbjct: 77 CSVCKREFSSGKALGGHMRVHIQASKKEDELVNKKTAKLKKQSV-NGPGSTTNNADDTTC 135
Query: 155 SLCHKCFPTGQALGGHKRCHYE 176
SLC K FP+ ++L GH RCH E
Sbjct: 136 SLCGKNFPSRKSLFGHMRCHPE 157
>GSVIVT01012197001 assembled CDS
Length = 554
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 33 TKRKRSKRSHHQPTEEEYLALCLVMLARGXXXXXXXXXXXXXXXXXXPTPSRQIPAALNN 92
+K++ + ++P E++ LA+CL+ML+R ++ + N
Sbjct: 319 SKKESGSQQENKPQEQQELAICLMMLSRDSGHWGGLNSLYDLSKR-----AKNDSYSEEN 373
Query: 93 SEEKPSYKCSVCNKAFSSYQALGGHKASH-RKLA--GNEDQXXXXXXXXXXXXXVSNGSG 149
++ Y+C CNK F S+QALGGH+A+H RKLA G+ + +
Sbjct: 374 VRKRSKYQCLTCNKTFHSHQALGGHRANHKRKLARFGSGKTPIAQDLSGKAEKKIGSRKS 433
Query: 150 KTHECSLCHKCFPTGQALGGHKRCHYEG 177
H C +C K F +GQALGGHK+ H+ G
Sbjct: 434 NGHMCPICFKVFRSGQALGGHKKSHFVG 461
>GSVIVT01018162001 assembled CDS
Length = 399
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 91 NNSEEKPSYKCSVCNKAFSSYQALGGHKASHRKLAG------NEDQXXXXXXXXXXXXXV 144
+ +E ++C C K F+S+QALGGH+ASH+K+ G +
Sbjct: 140 DGEDESWMFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDHMDESLADEDVITHDEF 199
Query: 145 SNGSGKTHECSLCHKCFPTGQALGGHKRCHYEGGSA 180
S S K HECS+CH+ F +GQALGGHKRCH+ +A
Sbjct: 200 SRKS-KVHECSICHRVFSSGQALGGHKRCHWITSTA 234
>GSVIVT01018161001 assembled CDS
Length = 257
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 99 YKCSVCNKAFSSYQALGGHKASHRKLAGNEDQXXXXXXXXXXXXXVSN---GSGKTHECS 155
YKC CNK F SYQALGGH+ASH+K+ SN K HEC
Sbjct: 122 YKCETCNKVFRSYQALGGHRASHKKIKA----CAPIKEVEFEPENASNPCLADAKIHECP 177
Query: 156 LCHKCFPTGQALGGHKRCHYEGGSAAAEKXXXXXXXXXXXXXXXHSLSQSQREFDLNLPA 215
+C + F +GQALGGHKR H G +AAA S+ DLNLPA
Sbjct: 178 VCFRKFTSGQALGGHKRSHISGSAAAAAAPAPPPPPRKASSKVGDSM------IDLNLPA 231
>GSVIVT01011505001 assembled CDS
Length = 692
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 66/162 (40%), Gaps = 39/162 (24%)
Query: 83 SRQIPAALNNSEEKPSYKCSVCNKAFSSYQALGGHK----ASHRKLAGNEDQXXXXXXXX 138
+++ PAA N K YKCS+C+K F S++ LGGH+ AS K G Q
Sbjct: 256 NKRSPAAQN----KRIYKCSICSKIFQSHRVLGGHRMRCLASKSKSCGKSIQTNKILPDG 311
Query: 139 XXXXXVS------NGSG----------------KTHECSLCHKCFPTGQALGGHKRCHYE 176
+ N G K +EC +C K F +GQALGGHKR HY
Sbjct: 312 KANSKLEKREYNENSIGQEAARVSGMNCELKRSKDYECEICFKVFASGQALGGHKRAHYA 371
Query: 177 GGSAAAEKXXXXXXXXXXXXXXXHSLSQSQREFDLNLPALPE 218
G S E+ S FDLNLP PE
Sbjct: 372 GSSETGEEGTTLVQQEH---------SDVSDIFDLNLPIAPE 404
>GSVIVT01016182001 assembled CDS
Length = 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 47 EEEYLALCLVMLARGXXXXXXXXXXXXXXXXXXPTPSRQIPAALNNSEEKPSYKCSVCNK 106
E+E LA CL++LA+G S A +Y+C CN+
Sbjct: 131 EDEDLANCLILLAQGQSREESKVEDGGG--------SVAAAATATAKAGFYAYECKTCNR 182
Query: 107 AFSSYQALGGHKASHRKLAGNEDQXXXXXXXXXXXXXVSNGSGKTHECSLCHKCFPTGQA 166
F S+QALGGH+ASH+K S+ + HECS+C F +GQA
Sbjct: 183 TFPSFQALGGHRASHKK-------------PKARAFNSSSSKSRIHECSICGAEFTSGQA 229
Query: 167 LGGHKRCH 174
LGGH R H
Sbjct: 230 LGGHMRRH 237
>GSVIVT01031461001 assembled CDS
Length = 228
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 99 YKCSVCNKAFSSYQALGGHKASHRKLAGNEDQXXXXXXXXXXXXXVSNGSGKTHECSLCH 158
Y+C CN+ F S+QALGGH+ASH+K S+ K HECS+C
Sbjct: 83 YECKTCNRTFPSFQALGGHRASHKKPKAISPPLSLQIGNNKALH--SSNKSKVHECSICG 140
Query: 159 KCFPTGQALGGHKRCH 174
F +GQALGGH R H
Sbjct: 141 SEFSSGQALGGHMRRH 156
>GSVIVT01037363001 assembled CDS
Length = 296
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 99 YKCSVCNKAFSSYQALGGHKASH------RKLAGNEDQXXXXXXXXXXXXXVSNGSGKTH 152
+KCS C+K F ++QALGGH++SH + + E++ V +G
Sbjct: 185 HKCSTCHKVFPTFQALGGHRSSHSYKNNLQAMDAGEEESKEGSSKV-----VVDG----F 235
Query: 153 ECSLCHKCFPTGQALGGHKRCHYEGGSAAAEKXXXXXXXXXXXXXXXHSLSQSQREFDLN 212
+C++C K F +GQALGGHKR H++G + A S+ FDLN
Sbjct: 236 KCNICSKNFRSGQALGGHKRAHFQGSTQAT------PTQDSASGKASESMGNKVLGFDLN 289
Query: 213 -LPALPE 218
LP + E
Sbjct: 290 ELPRMDE 296
>GSVIVT01033678001 assembled CDS
Length = 232
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 99 YKCSVCNKAFSSYQALGGHKASH----------RKLAGNEDQXXXXXXXXXXXX------ 142
Y+C C + F S+QALGGH+ASH R A ED+
Sbjct: 93 YQCKTCYRCFPSFQALGGHRASHKRPKAVTEEKRTWALMEDEYDQFNHNSTALSLQIPNR 152
Query: 143 -XVSNGSGKTHECSLCHKCFPTGQALGGHKRCH 174
SN K HECS+C F +GQALGGH R H
Sbjct: 153 GLYSNNKSKVHECSICGAEFSSGQALGGHMRRH 185
>GSVIVT01037364001 assembled CDS
Length = 328
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 98 SYKCSVCNKAFSSYQALGGHKASHRK------------LAGNEDQXXXXXXXXXXXXXVS 145
++KC CNK+F + QALGGH+ SHR+ L ++++ V+
Sbjct: 191 AHKCRTCNKSFPTGQALGGHQTSHRQKPAQLATPRQEALILSKNRNKLDQEIESESLLVA 250
Query: 146 NGSGKTHECSLCHKCFPTGQALGGHKRCH 174
+ +CS CHK FPT QALGGH+ H
Sbjct: 251 P---RESKCSTCHKVFPTLQALGGHRSSH 276
>GSVIVT01023887001 assembled CDS
Length = 235
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 93 SEEKPSYKCSVCNKAFSSYQALGGHKASH---------------RKLAGNEDQXXXXXXX 137
S K + CS C K F S++AL GH H R G ED
Sbjct: 72 SAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNYRRSEKGVEDADLGMSED 131
Query: 138 XXXXXXVSN----GSGKTHECSLCHKC------FPTGQALGGHKRCHYEGG 178
G G ECS C KC F +GQALGGHKRCH+E G
Sbjct: 132 DHEADGADGLDALGGGCRFECSSCKKCSICLRVFSSGQALGGHKRCHWERG 182
>GSVIVT01007927001 assembled CDS
Length = 351
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 150 KTHECSLCHKCFPTGQALGGHKRCHYEGGS 179
K HEC +C K F +GQALGGHKR H GGS
Sbjct: 267 KGHECPICLKVFSSGQALGGHKRSHLVGGS 296