Jatropha Genome Database

JcCB0905621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0905621.10 + phase: 2 /pseudo/partial
         (178 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01027342001 assembled CDS                                       202   6e-53
GSVIVT01027327001 assembled CDS                                       197   2e-51
GSVIVT01027333001 assembled CDS                                       197   3e-51
GSVIVT01027318001 assembled CDS                                       187   2e-48
GSVIVT01017353001 assembled CDS                                       182   1e-46
GSVIVT01026766001 assembled CDS                                       177   3e-45
GSVIVT01027339001 assembled CDS                                       176   4e-45
GSVIVT01004719001 assembled CDS                                       139   9e-34
GSVIVT01035966001 assembled CDS                                       135   9e-33
GSVIVT01020843001 assembled CDS                                       129   5e-31
GSVIVT01027335001 assembled CDS                                       124   3e-29
GSVIVT01018212001 assembled CDS                                       122   1e-28
GSVIVT01015428001 assembled CDS                                        77   4e-15
GSVIVT01018187001 assembled CDS                                        52   1e-07

>GSVIVT01027342001 assembled CDS
          Length = 409

 Score =  202 bits (514), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 117/162 (72%), Gaps = 17/162 (10%)

Query: 1   YYEKQFNLDYLLATYKKPL--------MEG---------FRIVTEKAVFAMPEASIGLFP 43
           +Y+KQ  LDYLLAT  KPL        M G         FR+VTE  VFAMPE  IG FP
Sbjct: 119 FYKKQLTLDYLLATSTKPLVSLINGIVMGGGAGLSMNSMFRVVTENTVFAMPEGQIGFFP 178

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR+PGYFGEYLGLTGAR+DG EMLACGLATHFV S+DLL LENAL    SSD
Sbjct: 179 DVGASYFLSRLPGYFGEYLGLTGARLDGKEMLACGLATHFVLSKDLLLLENALSEVASSD 238

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEIL 145
            + I +VI  F+ K+ +K++S Y RLE INKCFS+ TVEEIL
Sbjct: 239 ASTISRVISGFSSKISLKKESAYRRLETINKCFSRRTVEEIL 280


>GSVIVT01027327001 assembled CDS
          Length = 385

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 117/165 (70%), Gaps = 17/165 (10%)

Query: 1   YYEKQFNLDYLLATYKKPL--------MEG---------FRIVTEKAVFAMPEASIGLFP 43
           +Y+KQ  LDYL+AT  KPL        M G         FR+VTE  VFAMPE  IGLFP
Sbjct: 93  FYKKQLTLDYLIATSTKPLVSLINGIVMGGGAGLSMNSMFRVVTENTVFAMPEGQIGLFP 152

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR+ G FGEYLGLTGAR+DG+EMLACGLATHFV S+DLL LENAL    SSD
Sbjct: 153 DVGASYFLSRLSGSFGEYLGLTGARLDGSEMLACGLATHFVLSKDLLLLENALSEVASSD 212

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLAL 148
              I +VI  F+ K+ +K+DS + RLE INKCFSK TVEEIL  L
Sbjct: 213 ALTISRVISAFSSKISLKKDSAFRRLETINKCFSKGTVEEILSTL 257


>GSVIVT01027333001 assembled CDS
          Length = 385

 Score =  197 bits (500), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 115/162 (70%), Gaps = 17/162 (10%)

Query: 1   YYEKQFNLDYLLATYKKPL--------MEG---------FRIVTEKAVFAMPEASIGLFP 43
           +Y+KQ  LDY LAT  KPL        M G         FR+VTE  VFAMPE  IG FP
Sbjct: 106 FYKKQLTLDYFLATCTKPLVSLINGIVMGGGAGLSMNSMFRVVTENTVFAMPEGQIGFFP 165

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR+PG FGEYLGLTGAR+DG EMLACGLATHFV S+DLL LE+AL    SSD
Sbjct: 166 DVGASYFLSRLPGSFGEYLGLTGARLDGNEMLACGLATHFVLSKDLLLLESALSGVASSD 225

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEIL 145
            + I +VI  F+ K+ +K+DS Y RLE INKCFS+ TVEEIL
Sbjct: 226 ASTISRVISGFSSKISLKKDSAYRRLETINKCFSRRTVEEIL 267


>GSVIVT01027318001 assembled CDS
          Length = 350

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 119/165 (72%), Gaps = 18/165 (10%)

Query: 1   YYEKQFNLDYLLATYKKPL--------MEG---------FRIVTEKAVFAMPEASIGLFP 43
           +Y KQ  LDYL AT +K L        M G         FR+VTE  VFAMPEA +G FP
Sbjct: 61  FYRKQITLDYLFATSEKTLVSLINGIVMGGGVGLSMNSRFRVVTENTVFAMPEAQMGHFP 120

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+G S+FLSR+PG+FGEYLGLTGA+++G EMLACGLATHFV S+DLL LE AL ++ +SD
Sbjct: 121 DVGVSYFLSRLPGFFGEYLGLTGAQLNGTEMLACGLATHFVLSKDLLLLETAL-SEAASD 179

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLAL 148
            + I KVI +FA+K  +K+DS + RLEIINKCFS  TVEEILL L
Sbjct: 180 TSTIPKVINRFARKTFLKQDSAFMRLEIINKCFSAKTVEEILLLL 224


>GSVIVT01017353001 assembled CDS
          Length = 383

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 121/165 (73%), Gaps = 17/165 (10%)

Query: 1   YYEKQFNLDYLLATYKKP--------LMEG---------FRIVTEKAVFAMPEASIGLFP 43
           ++ +++ L+Y++ATY KP        +M G         FRI TE +VFAMPE ++GLFP
Sbjct: 93  FFWEEYILNYVMATYSKPQVSILNGIVMGGGAGASVHGRFRIATENSVFAMPETALGLFP 152

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR PG+FGEY+GLTGAR+DGAEMLACGLATHFV S  L SLE AL    SSD
Sbjct: 153 DVGASYFLSRFPGFFGEYVGLTGARLDGAEMLACGLATHFVPSARLSSLEAALHKLDSSD 212

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLAL 148
             +I  VI++++ +  +K+ STY+RL+IIN+CFS+ T+EEIL AL
Sbjct: 213 PAIISAVIDEYSLQPYLKDKSTYHRLDIINRCFSRRTIEEILSAL 257


>GSVIVT01026766001 assembled CDS
          Length = 383

 Score =  177 bits (448), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 118/165 (71%), Gaps = 17/165 (10%)

Query: 1   YYEKQFNLDYLLATYKKP--------LMEG---------FRIVTEKAVFAMPEASIGLFP 43
           ++ K+F L+Y++ATY KP        +M G         FRI TE +VFAMPE ++GLFP
Sbjct: 93  FFWKEFILNYVMATYSKPQVSILNGIVMGGGAGASMHGRFRIATENSVFAMPETALGLFP 152

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR+PG+FGEY+GLTGAR+DGAEMLACGLATHFV S  LL LE AL    S  
Sbjct: 153 DVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLLLLEAALCKLDSGA 212

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLAL 148
              I  ++++++Q+  +KE+S Y++L +INKCFS+ T+EEIL  L
Sbjct: 213 PATISSILDEYSQQPHLKENSAYHKLAVINKCFSRRTIEEILSTL 257


>GSVIVT01027339001 assembled CDS
          Length = 263

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/145 (60%), Positives = 103/145 (71%), Gaps = 17/145 (11%)

Query: 1   YYEKQFNLDYLLATYKKPL--------MEG---------FRIVTEKAVFAMPEASIGLFP 43
           +Y+KQ  LDYLLAT  KPL        M G         FR+VTE  VFAMPE  IGLFP
Sbjct: 119 FYKKQLTLDYLLATSTKPLVSLINGIIMGGGAGLSMNSMFRVVTENTVFAMPEGQIGLFP 178

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D+GAS+FLSR+PGYFGEYLGLTGAR+DG EMLACGLATHFV S+DLL LENAL    SSD
Sbjct: 179 DVGASYFLSRLPGYFGEYLGLTGARLDGKEMLACGLATHFVLSKDLLLLENALSEVASSD 238

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNR 128
            + I +VI  F+ K+ +K++S Y R
Sbjct: 239 ASTISRVISGFSSKISLKKESAYRR 263


>GSVIVT01004719001 assembled CDS
          Length = 438

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 101/162 (62%), Gaps = 17/162 (10%)

Query: 6   FNLDYLLATYKKP---LMEG--------------FRIVTEKAVFAMPEASIGLFPDLGAS 48
           ++L YL+ TY KP   L++G              F + T++ VF  PEA IG  PD GAS
Sbjct: 159 YSLMYLIHTYMKPHVALIDGVTMGAGAGISVLGTFCVATDRTVFGTPEALIGFHPDGGAS 218

Query: 49  HFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSDITMIY 108
           +FLS +PGY GEY+GLTGA + GAEM+ACGLATH+  S  +  +E  L+T +S D ++I 
Sbjct: 219 YFLSHLPGYLGEYMGLTGATLSGAEMVACGLATHYSLSAKIPLIEEQLKTLLSDDPSVIE 278

Query: 109 KVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLALVS 150
            V+ KF+      E S   R+E+++KCF  DTVEEI+ AL S
Sbjct: 279 AVLAKFSDVAYPDERSVLCRIEMLDKCFGHDTVEEIVNALES 320


>GSVIVT01035966001 assembled CDS
          Length = 407

 Score =  135 bits (340), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 17/165 (10%)

Query: 1   YYEKQFNLDYLLATYKKP---LMEG--------------FRIVTEKAVFAMPEASIGLFP 43
           ++E  +   YLL TY KP   +++G              FR+VT+K VFA PE  +G  P
Sbjct: 123 FFETLYKFVYLLGTYVKPNVAIVDGITMGGGAGISIPAMFRVVTDKTVFATPETQMGFHP 182

Query: 44  DLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSD 103
           D GAS +LSR+PGY GEYL LTG +++G EM+ACGLATH+  +  L  +E  L   I+ D
Sbjct: 183 DAGASFYLSRLPGYLGEYLALTGEKLNGVEMIACGLATHYSLTARLPLIEERLGKLITDD 242

Query: 104 ITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLAL 148
            ++I   +E++   V   + S  +++E I+KCF  DTVEEI+ AL
Sbjct: 243 PSVIESSLEQYGDLVYPDKRSVLHKIETIDKCFCHDTVEEIINAL 287


>GSVIVT01020843001 assembled CDS
          Length = 389

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 83/123 (67%)

Query: 23  FRIVTEKAVFAMPEASIGLFPDLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATH 82
           F +VTEK VFA PEA+IG   D G S+ LS +PG+ GE++ LTGAR++G E++  GLATH
Sbjct: 129 FSVVTEKTVFATPEATIGFHTDCGFSYMLSHLPGHLGEFIALTGARLNGKELVTVGLATH 188

Query: 83  FVFSQDLLSLENALQTQISSDITMIYKVIEKFAQKVKIKEDSTYNRLEIINKCFSKDTVE 142
           +V S+ +  LE  L    S D   I   IE+F+  VK+ EDS  N+   IN+CFSKD+VE
Sbjct: 189 YVPSEKMPELEKRLMCLNSGDRNAIKSAIEEFSLDVKVDEDSVLNKQSTINECFSKDSVE 248

Query: 143 EIL 145
           EI+
Sbjct: 249 EII 251


>GSVIVT01027335001 assembled CDS
          Length = 116

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 2/106 (1%)

Query: 23  FRIVTEKAVFAMPEASIGLFPDLGASHFLSRIPGYFGEYLGLTGARVDGAEMLACGLATH 82
           FR+VTE  V A+P+  I LF D+GAS+FLSR+PG+ GEYLGLTG ++DG E++ACGLATH
Sbjct: 13  FRVVTENTVLAIPKGQIRLFLDVGASYFLSRLPGFVGEYLGLTGTQLDGNEIIACGLATH 72

Query: 83  FVFSQDLLSLENALQTQISSDITMIYKVIEKFAQKVKIKEDSTYNR 128
           FV S+DL  LENAL    S D + I +VI  F++   +K+DS + R
Sbjct: 73  FVLSKDLFLLENALSEVASLDASTISRVINGFSR--SLKKDSAFRR 116


>GSVIVT01018212001 assembled CDS
          Length = 405

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 17/158 (10%)

Query: 10  YLLATYKKP---LMEG--------------FRIVTEKAVFAMPEASIGLFPDLGASHFLS 52
           YL+ TY KP   +++G              FR+ T++ VFA PE  IG   D GAS  LS
Sbjct: 130 YLVGTYLKPNVAILDGITMGGGAGVSIPGMFRVATDRTVFATPETLIGFHTDAGASFHLS 189

Query: 53  RIPGYFGEYLGLTGARVDGAEMLACGLATHFVFSQDLLSLENALQTQISSDITMIYKVIE 112
            +PGY+GEYL LTG +++G EM+ACGLATH+  S  L  +E  L   ++ D ++I   +E
Sbjct: 190 HLPGYWGEYLALTGEKLNGPEMIACGLATHYAPSAKLPLIEEGLGKLVTDDPSVIEASLE 249

Query: 113 KFAQKVKIKEDSTYNRLEIINKCFSKDTVEEILLALVS 150
           ++   +         R+E ++KCFS  TVEEI+ AL S
Sbjct: 250 QYGSLISPDNRGLLQRIETLDKCFSHGTVEEIIDALES 287


>GSVIVT01015428001 assembled CDS
          Length = 407

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 20/117 (17%)

Query: 2   YEKQFNLDYLLATYKKP---LMEG--------------FRIVTEKAVFAMPEASIGLFPD 44
           +  +++L   ++ YKKP   LM+G              +RIVTE+ + AMPE  IGLFPD
Sbjct: 119 FTAEYSLICKISEYKKPYISLMDGITMGFGIGLSGHGRYRIVTERTLLAMPENGIGLFPD 178

Query: 45  LGASHFLSRIP--GYFGEYLGLTGARVD-GAEMLACGLATHFVFSQDLLSLENALQT 98
           +G ++  ++ P  G  G YLG+TG R+   A+ L  GL TH+V S +L SL+ AL T
Sbjct: 179 VGFAYIAAQSPGEGSVGAYLGMTGKRISTSADALYVGLGTHYVPSGNLSSLKEALLT 235


>GSVIVT01018187001 assembled CDS
          Length = 139

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 17/82 (20%)

Query: 2   YEKQFNLDYLLATYKKP---LMEG--------------FRIVTEKAVFAMPEASIGLFPD 44
           +   ++  YL+ TY  P   +++G              FR+ T++ VFA PE  IG   D
Sbjct: 54  FRTVYSFIYLVGTYLNPNVAILDGITMGSRAGVSILGMFRVATDRTVFATPETLIGFHTD 113

Query: 45  LGASHFLSRIPGYFGEYLGLTG 66
            GAS  LS +PGY+G  LG  G
Sbjct: 114 AGASFHLSHLPGYWGGILGSNG 135