Jatropha Genome Database

JcCB0891701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0891701.10 + phase: 0 /partial
         (151 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01000084001 assembled CDS                                       236   2e-63
GSVIVT01000083001 assembled CDS                                       234   9e-63
GSVIVT01017943001 assembled CDS                                       194   1e-50
GSVIVT01003798001 assembled CDS                                       161   9e-41
GSVIVT01005730001 assembled CDS                                       155   8e-39
GSVIVT01016738001 assembled CDS                                       153   3e-38
GSVIVT01025339001 assembled CDS                                       151   1e-37
GSVIVT01032029001 assembled CDS                                       147   2e-36
GSVIVT01025341001 assembled CDS                                       144   2e-35
GSVIVT01025342001 assembled CDS                                       141   1e-34
GSVIVT01010359001 assembled CDS                                       139   5e-34
GSVIVT01025340001 assembled CDS                                       139   6e-34
GSVIVT01025328001 assembled CDS                                       128   1e-30
GSVIVT01032028001 assembled CDS                                        99   5e-22

>GSVIVT01000084001 assembled CDS
          Length = 900

 Score =  236 bits (603), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 107/151 (70%), Positives = 127/151 (84%)

Query: 1   TFDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVF 60
           TFDW+E+IG PGAF +RNNHH+EFYL +LTLEDVPG G IHFVCNSW+YPA++++ DRVF
Sbjct: 138 TFDWDEEIGEPGAFIIRNNHHSEFYLRTLTLEDVPGRGRIHFVCNSWVYPAQHYKTDRVF 197

Query: 61  FPNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYAR 120
           F N+ Y+P +TP PL KYRE EL NLRG G G+L+E DRVYDYAYYNDLG+PD+D KYAR
Sbjct: 198 FTNQTYLPSETPGPLRKYREGELVNLRGDGTGKLKEWDRVYDYAYYNDLGNPDRDLKYAR 257

Query: 121 PTLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
           P LGGS E+PYPRR RTGR P + DP+ ESR
Sbjct: 258 PVLGGSAEYPYPRRGRTGRPPSEKDPNTESR 288


>GSVIVT01000083001 assembled CDS
          Length = 738

 Score =  234 bits (598), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 107/151 (70%), Positives = 125/151 (82%)

Query: 1   TFDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVF 60
           TFDW+E+IG PGAF +RNNHH+EFYL +LTLEDVPG G IHFVCNSW+YPA++++ DRVF
Sbjct: 97  TFDWDEEIGEPGAFIIRNNHHSEFYLRTLTLEDVPGRGRIHFVCNSWVYPAKHYKTDRVF 156

Query: 61  FPNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYAR 120
           F N+ Y+P +TP PL KYR+ EL NLRG G GEL+E DRVYDYAYYNDLG PD+D KYAR
Sbjct: 157 FTNQTYLPSETPGPLRKYRKGELVNLRGDGTGELKEWDRVYDYAYYNDLGKPDRDLKYAR 216

Query: 121 PTLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
           P LGGS E+PYPRR RTGR P + DP  ESR
Sbjct: 217 PVLGGSAEYPYPRRGRTGRPPSEKDPKTESR 247


>GSVIVT01017943001 assembled CDS
          Length = 751

 Score =  194 bits (494), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/151 (64%), Positives = 117/151 (77%), Gaps = 1/151 (0%)

Query: 1   TFDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVF 60
           TFDWEE +G+PGA  V N+HH+EFYL S+TLEDVPG G IHFVCNSW++P   +  +RVF
Sbjct: 112 TFDWEEGMGVPGALRVSNHHHSEFYLSSVTLEDVPGQGRIHFVCNSWVFPVR-YTNERVF 170

Query: 61  FPNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYAR 120
           F NKAY+P  TP PL +YREEEL  LRG+G+GE +  +R+YDY  YNDLG+PDK P +AR
Sbjct: 171 FSNKAYLPCHTPEPLRQYREEELVKLRGNGQGERKTWERIYDYDVYNDLGNPDKGPSHAR 230

Query: 121 PTLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
           P LGGS ++PYPRR RTGRE  KTDP  E R
Sbjct: 231 PILGGSEDYPYPRRGRTGRERTKTDPCSEKR 261


>GSVIVT01003798001 assembled CDS
          Length = 619

 Score =  161 bits (408), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 98/138 (71%), Gaps = 1/138 (0%)

Query: 2   FDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFF 61
           F  E D GIPGAF ++N H  +F+L+S TLE VP + SI F C SWIYP    + +R+FF
Sbjct: 91  FRVEPDFGIPGAFLIKNEHKHKFFLQSATLE-VPANQSIQFNCKSWIYPFTKTKTNRLFF 149

Query: 62  PNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARP 121
            N  Y+P +TP  L + R+EELE+LRG G GE +E DRVY+Y YYNDLG+PDK  ++ RP
Sbjct: 150 SNTVYLPNETPEALDELRKEELESLRGHGTGERKEWDRVYEYDYYNDLGNPDKGQEHVRP 209

Query: 122 TLGGSTEHPYPRRVRTGR 139
            LGGS  +PYPRR RTGR
Sbjct: 210 ILGGSDSYPYPRRGRTGR 227


>GSVIVT01005730001 assembled CDS
          Length = 641

 Score =  155 bits (391), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 83/150 (55%), Positives = 103/150 (68%), Gaps = 1/150 (0%)

Query: 2   FDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFF 61
           F  E D GIPGAF ++N H  +F+L+S TLE VP + SI F C SWIYP    + +R+FF
Sbjct: 91  FRVEPDFGIPGAFLIKNEHKHKFFLQSATLE-VPANQSIQFNCKSWIYPFTKTKTNRLFF 149

Query: 62  PNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARP 121
            N  Y+P +TP  L + R+EELE+LRG G GE +E DRVY+Y YYNDLG+PDK  ++ RP
Sbjct: 150 SNTVYLPNETPEALDELRKEELESLRGHGTGERKEWDRVYEYDYYNDLGNPDKGQEHVRP 209

Query: 122 TLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
            LGGS  +PYPRR RTGR     DP  ESR
Sbjct: 210 ILGGSDSYPYPRRGRTGRPRCNQDPLTESR 239


>GSVIVT01016738001 assembled CDS
          Length = 927

 Score =  153 bits (387), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 2/150 (1%)

Query: 2   FDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFF 61
           F  + + G PGA TV N H  EF+LES+T+E     G +HF CNSW+   ++H   R+FF
Sbjct: 160 FTVDSNFGDPGAITVTNKHQKEFFLESITIEGF-ACGPVHFPCNSWVQSKKDHPGKRLFF 218

Query: 62  PNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARP 121
            NK Y+P +TP  L   RE+EL +LRG GKG  + +DR+YDY  YNDLG+PD     ARP
Sbjct: 219 SNKPYLPGETPAGLRALREKELRDLRGDGKGVRKSSDRIYDYDVYNDLGNPDNGINSARP 278

Query: 122 TLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
            LGG  + P+PRR RTGR P KTD   ESR
Sbjct: 279 MLGGE-KIPFPRRCRTGRPPSKTDMHAESR 307


>GSVIVT01025339001 assembled CDS
          Length = 901

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/146 (50%), Positives = 97/146 (66%), Gaps = 1/146 (0%)

Query: 6   EDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKA 65
           +D G  GA  V+N HH E YL  + L+  P +G I F C+SW+    +  + RVFF NK+
Sbjct: 149 DDFGEIGAVLVQNEHHKEMYLRYIVLDGFP-NGPIEFNCSSWVASKFDDPQKRVFFTNKS 207

Query: 66  YIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGG 125
           Y+P +TP+ L + RE+EL  LRG+G+GE +  DR+YDY  Y+DLGDPD  P+  RP LGG
Sbjct: 208 YLPLETPSGLKEIREKELVTLRGNGQGERKSYDRIYDYDVYDDLGDPDSSPELTRPVLGG 267

Query: 126 STEHPYPRRVRTGREPMKTDPDCESR 151
           S ++PYPRR RTGR   K DP  E+R
Sbjct: 268 SKQYPYPRRCRTGRPMSKIDPKAETR 293


>GSVIVT01032029001 assembled CDS
          Length = 866

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 95/140 (67%), Gaps = 2/140 (1%)

Query: 12  GAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKAYIPQKT 71
           GA  V N HH E ++ ++ L+ +  +G IH  C+SW++   ++ K R+FF NK+Y+P +T
Sbjct: 186 GAILVENEHHKEMFINNIVLDGL-HNGPIHINCSSWVHSKFDNPKKRIFFTNKSYLPDET 244

Query: 72  PTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGGSTEHPY 131
           P+ L K RE ELENLRG+GKGE + +DR+YDY  YNDLGDPD     ARP +GG  +HPY
Sbjct: 245 PSGLTKLREMELENLRGNGKGERKTSDRIYDYDTYNDLGDPDDSEDLARPIIGGK-DHPY 303

Query: 132 PRRVRTGREPMKTDPDCESR 151
           PRR RTGR   K DP  E R
Sbjct: 304 PRRCRTGRPSSKKDPLSEKR 323


>GSVIVT01025341001 assembled CDS
          Length = 2408

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 95/145 (65%), Gaps = 1/145 (0%)

Query: 7   DIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKAY 66
           D G  GA  V N H  E YL+ + L  +P +G I F C+SW+ P  +  + RVFF  K+Y
Sbjct: 830 DFGEIGAVLVENEHKNEMYLKHIVLNGLP-NGPIEFNCDSWVEPKFDKPEKRVFFTFKSY 888

Query: 67  IPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGGS 126
           +P +TP  L+  RE++L +LRG+GKGE + +DR+YDY  YNDLGDPD   + ARP LGGS
Sbjct: 889 LPSQTPRGLNSLREKDLVSLRGNGKGERKTSDRIYDYDVYNDLGDPDSKSELARPVLGGS 948

Query: 127 TEHPYPRRVRTGREPMKTDPDCESR 151
            ++PYPRR RTG    K DP  E+R
Sbjct: 949 KKYPYPRRCRTGCPRSKIDPLSETR 973



 Score =  142 bits (359), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 1/145 (0%)

Query: 7    DIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKAY 66
            D G  GA  V+N + +E +L+ + L  +P +G I F C SW+    +  + R+FF NK+Y
Sbjct: 1657 DFGEIGAVLVQNEYRSEMFLKYIVLNGLP-NGPIAFNCGSWVQSKFDDPEKRIFFSNKSY 1715

Query: 67   IPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGGS 126
            +P +TP  L   RE+EL NLRG+G+GE + +DR+YDY  YNDLG+PD   +  R  LGG+
Sbjct: 1716 LPSQTPRGLKDLREKELANLRGNGEGERKTSDRIYDYDVYNDLGNPDSKSELGRSVLGGN 1775

Query: 127  TEHPYPRRVRTGREPMKTDPDCESR 151
              +PYPRR RTGR P +TDP  E+R
Sbjct: 1776 ENYPYPRRCRTGRAPCQTDPLSETR 1800



 Score = 79.3 bits (194), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 54  HEKDRVFFPNKAYIPQKTPTPLHKY-REEELENLRGSGKGELQEADRVYDYAYYNDLGDP 112
           H KD  F     +   +T T    Y RE+EL++LRG+ +GE + ++R+YDY  YNDLGDP
Sbjct: 145 HSKD-FFLQQVLFTLVRTVTHFCSYLREKELDSLRGNDEGEHKTSNRIYDYDVYNDLGDP 203

Query: 113 DKDPKYARPTLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
            K P+  RP LG S ++PYPRR   G    KTDP  ++R
Sbjct: 204 SK-PELVRPVLGDSKQYPYPRRCGIGCLRYKTDPHSKTR 241


>GSVIVT01025342001 assembled CDS
          Length = 817

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 2/140 (1%)

Query: 7   DIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKAY 66
           D G  GA  V N H +E YL+ + L+ +P +G I F C SWI P  ++ + R+FF NK Y
Sbjct: 70  DFGEIGAVLVENEHSSEIYLQHIILDGLP-NGPIRFHCGSWIEPKSDNSRKRLFFTNKLY 128

Query: 67  IPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGGS 126
           +P +TP  L   RE+EL++LRG+ +GE + ++R+YDY  YNDLGDP+ +PK ARP LGGS
Sbjct: 129 LPSQTPEGLKNLREKELDSLRGNDEGEHKTSNRIYDYDVYNDLGDPN-NPKLARPVLGGS 187

Query: 127 TEHPYPRRVRTGREPMKTDP 146
            ++PYPRR  TG    KTDP
Sbjct: 188 KQYPYPRRCGTGHLQYKTDP 207


>GSVIVT01010359001 assembled CDS
          Length = 920

 Score =  139 bits (350), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 2/145 (1%)

Query: 7   DIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFFPNKAY 66
           D G PGA  + N H  EF+L  + +      G I F  NSWI+  +++ + R+ F N+AY
Sbjct: 167 DFGSPGAVLISNLHGKEFHLMEIVIHGF-DEGPIFFPANSWIHSRKDNPESRIIFRNQAY 225

Query: 67  IPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLGGS 126
           +P +TP  L   R E+L +LRG+ KGE +  DR+YDYA YNDLG+PDK    ARP L G 
Sbjct: 226 LPSQTPPGLKDLRREDLLSLRGNRKGERKPHDRIYDYAPYNDLGNPDKSEDLARPVLAGE 285

Query: 127 TEHPYPRRVRTGREPMKTDPDCESR 151
            E PYPRR RTGR P +TDP CESR
Sbjct: 286 -ERPYPRRCRTGRPPTRTDPLCESR 309


>GSVIVT01025340001 assembled CDS
          Length = 872

 Score =  139 bits (349), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 1/150 (0%)

Query: 2   FDWEEDIGIPGAFTVRNNHHTEFYLESLTLEDVPGHGSIHFVCNSWIYPAENHEKDRVFF 61
           F+   D G  GA  V+N    E YL+ + L  +P  G I F C SW+    ++ + R+FF
Sbjct: 116 FEIPGDFGEIGAVLVQNELRNEMYLKYIVLNGLPS-GPIAFNCGSWVESKFDNPEKRIFF 174

Query: 62  PNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARP 121
            NK+ +P +TP  L   RE+EL +LRG+G+GE + +DR+YDY  YNDLG+PD   +  RP
Sbjct: 175 SNKSCLPLQTPRGLKGMREKELASLRGNGEGERKTSDRIYDYGVYNDLGNPDSKSELGRP 234

Query: 122 TLGGSTEHPYPRRVRTGREPMKTDPDCESR 151
            LGGS   PYPRR RTGR   KTDP  E+R
Sbjct: 235 VLGGSKNFPYPRRCRTGRPRSKTDPHSETR 264


>GSVIVT01025328001 assembled CDS
          Length = 335

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 72/92 (78%)

Query: 59  VFFPNKAYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKY 118
           +F+  + Y+P +TP PL KYRE EL NLRG G GEL+E DRVYDYAYYNDLG+PD+D KY
Sbjct: 3   LFYLLQTYLPSETPGPLRKYREGELVNLRGDGTGELKEWDRVYDYAYYNDLGNPDRDLKY 62

Query: 119 ARPTLGGSTEHPYPRRVRTGREPMKTDPDCES 150
            RP LGGS E+PYPRR RTGR P + DP+ ES
Sbjct: 63  TRPVLGGSAEYPYPRRGRTGRPPSEKDPNTES 94


>GSVIVT01032028001 assembled CDS
          Length = 4514

 Score = 99.4 bits (246), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 1/87 (1%)

Query: 65   AYIPQKTPTPLHKYREEELENLRGSGKGELQEADRVYDYAYYNDLGDPDKDPKYARPTLG 124
            +Y+P  T + L K RE ELENLRG+GKGE + +D++YDY  YNDL DPD     ARP LG
Sbjct: 4114 SYLPDDTASGLKKLREIELENLRGNGKGERKTSDKIYDYDTYNDLWDPDDSKDLARPILG 4173

Query: 125  GSTEHPYPRRVRTGREPMKTDPDCESR 151
            G  +HPYPRR RTGR   K DP  E+R
Sbjct: 4174 GQ-DHPYPRRCRTGRPSSKKDPLSETR 4199