Jatropha Genome Database
- JcCB0891141.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0891141.10 - phase: 1 /partial
(83 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01000720001 assembled CDS 129 3e-31
GSVIVT01018099001 assembled CDS 126 2e-30
GSVIVT01021779001 assembled CDS 125 4e-30
GSVIVT01017046001 assembled CDS 94 2e-20
GSVIVT01015350001 assembled CDS 93 2e-20
GSVIVT01000721001 assembled CDS 93 3e-20
GSVIVT01018101001 assembled CDS 93 3e-20
GSVIVT01009238001 assembled CDS 92 5e-20
GSVIVT01036283001 assembled CDS 87 1e-18
GSVIVT01022048001 assembled CDS 85 5e-18
GSVIVT01017159001 assembled CDS 81 8e-17
GSVIVT01015449001 assembled CDS 80 2e-16
GSVIVT01028432001 assembled CDS 65 8e-12
GSVIVT01035295001 assembled CDS 63 2e-11
GSVIVT01016972001 assembled CDS 61 1e-10
GSVIVT01035866001 assembled CDS 59 3e-10
GSVIVT01017711001 assembled CDS 50 3e-07
>GSVIVT01000720001 assembled CDS
Length = 186
Score = 129 bits (324), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 68/77 (88%)
Query: 3 ETAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYS 62
+ APP KAQVVGWPP+RSYRKN FQ +K EAEG+G+YVKVSMDGAPYLRKIDLK+YK Y
Sbjct: 63 DDAPPPKAQVVGWPPVRSYRKNSFQQRKGEAEGAGMYVKVSMDGAPYLRKIDLKVYKSYP 122
Query: 63 ELLKALEDMFKFEVGKY 79
ELL ALE+MFKF +G+Y
Sbjct: 123 ELLNALENMFKFRIGEY 139
>GSVIVT01018099001 assembled CDS
Length = 192
Score = 126 bits (317), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%)
Query: 1 DQETAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKD 60
D+E AP KAQVVGWPPIRS+RKN FQ KK EAE +G++VKVSMDGAPYLRKIDLK+YK
Sbjct: 59 DRENAPATKAQVVGWPPIRSFRKNSFQPKKTEAEAAGMFVKVSMDGAPYLRKIDLKVYKG 118
Query: 61 YSELLKALEDMFKFEVGKY 79
Y ELL+AL++MFKF +G Y
Sbjct: 119 YPELLQALQNMFKFTIGDY 137
>GSVIVT01021779001 assembled CDS
Length = 199
Score = 125 bits (314), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 67/78 (85%)
Query: 2 QETAPPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDY 61
+ETAP KAQVVGWPP+RSYRK+CFQ KK EAE Y+KVSMDGAPYLRKIDLK+YK Y
Sbjct: 67 RETAPAPKAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGY 126
Query: 62 SELLKALEDMFKFEVGKY 79
ELLKALE+MFKF VG+Y
Sbjct: 127 PELLKALEEMFKFSVGQY 144
>GSVIVT01017046001 assembled CDS
Length = 292
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Query: 1 DQETAPPAKAQVVGWPPIRSYRKNCF--QAKKME-AEG-SGI---YVKVSMDGAPYLRKI 53
+ +AP AKAQVVGWPPIRS+RKN AK E AEG SG+ YVKVSMDGAPYLRK+
Sbjct: 129 EHASAPAAKAQVVGWPPIRSFRKNTMASSAKNNEDAEGKSGLGCLYVKVSMDGAPYLRKV 188
Query: 54 DLKLYKDYSELLKALEDMFK-FEVGK 78
DLK+Y +Y EL ALE MF F +G+
Sbjct: 189 DLKIYCNYMELSSALEKMFSCFTIGQ 214
>GSVIVT01015350001 assembled CDS
Length = 170
Score = 93.2 bits (230), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 61/86 (70%), Gaps = 9/86 (10%)
Query: 2 QETAPPAKAQVVGWPPIRSYRKNCFQAK----KMEAEG---SG-IYVKVSMDGAPYLRKI 53
Q +AP AKAQVVGWPPIRS+RKN + +AEG SG +YVKVSMDGAPYLRK+
Sbjct: 7 QISAPAAKAQVVGWPPIRSFRKNSMASNLPKNDEDAEGKLGSGCLYVKVSMDGAPYLRKV 66
Query: 54 DLKLYKDYSELLKALEDMFK-FEVGK 78
DLKLY Y EL ALE MF F +G+
Sbjct: 67 DLKLYSTYMELSSALEKMFSCFTIGQ 92
>GSVIVT01000721001 assembled CDS
Length = 235
Score = 92.8 bits (229), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Query: 6 PPAKAQVVGWPPIRSYRKNCFQAKKMEAE------GSGIYVKVSMDGAPYLRKIDLKLYK 59
PPAKAQVVGWPP+RS+RKN +K +E + +VKVSMDGAPYLRK+DLK+Y
Sbjct: 80 PPAKAQVVGWPPVRSFRKNMLAGQKGGSEEGEKVSCNAAFVKVSMDGAPYLRKVDLKMYT 139
Query: 60 DYSELLKALEDMF-KFEVGKY 79
Y EL AL +MF F +G Y
Sbjct: 140 SYQELSNALGNMFSSFTIGNY 160
>GSVIVT01018101001 assembled CDS
Length = 237
Score = 92.8 bits (229), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 6/80 (7%)
Query: 6 PPAKAQVVGWPPIRSYRKNCFQAKKMEAEG-----SGIYVKVSMDGAPYLRKIDLKLYKD 60
PPAKAQVVGWPP+RS+RKN K EG +VKV MDGAPYLRK+DLK+YK
Sbjct: 83 PPAKAQVVGWPPVRSFRKNIMAQKNSSEEGEKGSSGAAFVKVCMDGAPYLRKVDLKMYKS 142
Query: 61 YSELLKALEDMF-KFEVGKY 79
Y EL AL MF F +G Y
Sbjct: 143 YQELSDALGKMFSSFTMGNY 162
>GSVIVT01009238001 assembled CDS
Length = 318
Score = 92.0 bits (227), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 7/86 (8%)
Query: 1 DQETAPPAKAQVVGWPPIRSYRKNCF--QAKKMEAEGSG----IYVKVSMDGAPYLRKID 54
+ +AP KAQVVGWPPIRS+RKN +K E +G ++VKVSMDGAPYLRK+D
Sbjct: 156 NNSSAPATKAQVVGWPPIRSFRKNTLATTSKNTEVDGKAGPGALFVKVSMDGAPYLRKVD 215
Query: 55 LKLYKDYSELLKALEDMFK-FEVGKY 79
L+ Y Y EL ALE MF F +G+Y
Sbjct: 216 LRNYSAYQELSSALEKMFSCFTIGQY 241
>GSVIVT01036283001 assembled CDS
Length = 170
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 6/79 (7%)
Query: 6 PPAKAQVVGWPPIRSYRKNCFQAKK-----MEAEGSGIYVKVSMDGAPYLRKIDLKLYKD 60
PPAKAQVVGWPP+RS+RKN +K +A S +VKVSMDGAPYLRK+DLK+YK
Sbjct: 16 PPAKAQVVGWPPVRSFRKNILTVQKNSSEEEKASSSAAFVKVSMDGAPYLRKVDLKMYKS 75
Query: 61 YSELLKALEDMF-KFEVGK 78
Y EL AL MF F +G
Sbjct: 76 YQELSDALGKMFSSFTIGN 94
>GSVIVT01022048001 assembled CDS
Length = 193
Score = 85.1 bits (209), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 2 QETAPPAKAQVVGWPPIRSYRKNCFQA---KKME-AEGS----GIYVKVSMDGAPYLRKI 53
Q +AP AKAQVVGWPPIR +RKN + K E AEG +Y KV+MDGAPYLRK+
Sbjct: 89 QISAPAAKAQVVGWPPIRYFRKNSMASNLPKNNEGAEGKLGSRCLYAKVNMDGAPYLRKV 148
Query: 54 DLKLYKDYSELLKALEDMFK-FEVGK 78
DLKLY Y EL ALE MF F +G+
Sbjct: 149 DLKLYCTYMELSSALEKMFSCFTIGQ 174
>GSVIVT01017159001 assembled CDS
Length = 294
Score = 81.3 bits (199), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 8/67 (11%)
Query: 6 PPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSELL 65
PPAK Q+VGWPP+++ RKN + K YVKV++DGAPYLRK+DL++Y Y +LL
Sbjct: 156 PPAKTQIVGWPPVKASRKNVAKISK--------YVKVAVDGAPYLRKVDLEMYGSYQQLL 207
Query: 66 KALEDMF 72
+LEDMF
Sbjct: 208 GSLEDMF 214
>GSVIVT01015449001 assembled CDS
Length = 216
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 8/68 (11%)
Query: 5 APPAKAQVVGWPPIRSYRKNCFQAKKMEAEGSGIYVKVSMDGAPYLRKIDLKLYKDYSEL 64
AP +KAQVVGWPP+RS RK ++ K YVKV++DGAPYLRK+DL++++ Y +L
Sbjct: 82 APDSKAQVVGWPPVRSVRKKALKSCK--------YVKVAVDGAPYLRKVDLEVHRSYQQL 133
Query: 65 LKALEDMF 72
L ALE MF
Sbjct: 134 LMALETMF 141
>GSVIVT01028432001 assembled CDS
Length = 232
Score = 64.7 bits (156), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 15/88 (17%)
Query: 1 DQETAPPAKAQVVGWPPIRSYRKNCF--QAKKMEAE-------------GSGIYVKVSMD 45
D A +QVVGWPPIR+YR N Q+K + E + +VKV+MD
Sbjct: 54 DSVAASNNGSQVVGWPPIRAYRMNSLANQSKSLVTEDLNSMVEKSKRPLNTSFFVKVNMD 113
Query: 46 GAPYLRKIDLKLYKDYSELLKALEDMFK 73
G P RK+DL + Y L K LE+MF+
Sbjct: 114 GIPIGRKVDLSAHSCYETLAKTLEEMFQ 141
>GSVIVT01035295001 assembled CDS
Length = 205
Score = 63.2 bits (152), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 19/83 (22%)
Query: 10 AQVVGWPPIRSYRKNCFQAK-------------------KMEAEGSGIYVKVSMDGAPYL 50
A VVGWPPIRS+RKN + K E+ +G++VK++MDG P
Sbjct: 28 APVVGWPPIRSFRKNLVNSSSSKPESESPNKIPEETGYGKSESSKTGLFVKINMDGVPIG 87
Query: 51 RKIDLKLYKDYSELLKALEDMFK 73
RK+DLK Y +L A++D+F+
Sbjct: 88 RKVDLKACDSYEKLSYAVDDLFR 110
>GSVIVT01016972001 assembled CDS
Length = 364
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 23/92 (25%)
Query: 2 QETAPPAKAQVVGWPPIRSYRKNCFQA--------------------KKMEAEGSGIYVK 41
+ +AP A VVGWPPIRS+RKN + K +E G++VK
Sbjct: 185 KRSAPTA---VVGWPPIRSFRKNLASSSSSKPANESQDVVPNKIASEKPVEVGKKGLFVK 241
Query: 42 VSMDGAPYLRKIDLKLYKDYSELLKALEDMFK 73
++MDG P RK+DL Y Y +L A++++F+
Sbjct: 242 INMDGVPIGRKVDLTAYDSYEKLSSAVDELFR 273
>GSVIVT01035866001 assembled CDS
Length = 227
Score = 59.3 bits (142), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 16/88 (18%)
Query: 12 VVGWPPIRSYRKNCF---QAKKM--------EAEGSG-IYVKVSMDGAPYLRKIDLKLYK 59
VVGWPP++S+RK Q +M E+ G+G IYVKV M+G RKI+LKLY+
Sbjct: 106 VVGWPPVKSWRKKVICQHQGGRMVFDRTAEKESGGAGPIYVKVKMEGVAIARKINLKLYQ 165
Query: 60 DYSELLKALEDMF----KFEVGKYYYTL 83
Y L +L MF K +V +YTL
Sbjct: 166 SYQMLKNSLTAMFARCKKCDVDCVHYTL 193
>GSVIVT01017711001 assembled CDS
Length = 198
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 QETAPPAKAQVVGWPPIRSYRKNCFQAK-KMEAEGSGIYVKVSMDGAPYLRKIDLKLYKD 60
+AP + Q V WPPI+ ++ K + + + ++VKV M+G RK+DL Y
Sbjct: 69 SSSAPSPRDQRVDWPPIKPLLRSTLTGKADNQRQATNLFVKVYMEGISIGRKLDLFAYSG 128
Query: 61 YSELLKALEDMFKFEV 76
Y L+ L MFK +
Sbjct: 129 YDGLVATLSHMFKTTI 144