Jatropha Genome Database

JcCB0776371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0776371.10 + phase: 1 /partial
         (167 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01015254001 assembled CDS                                       310   2e-85
GSVIVT01004706001 assembled CDS                                       199   4e-52
GSVIVT01005287001 assembled CDS                                       159   5e-40
GSVIVT01013821001 assembled CDS                                       124   2e-29
GSVIVT01006160001 assembled CDS                                       110   3e-25
GSVIVT01013293001 assembled CDS                                       102   7e-23
GSVIVT01035583001 assembled CDS                                        75   1e-14
GSVIVT01023072001 assembled CDS                                        67   3e-12
GSVIVT01036115001 assembled CDS                                        67   4e-12

>GSVIVT01015254001 assembled CDS
          Length = 517

 Score =  310 bits (794), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 146/166 (87%), Positives = 160/166 (96%)

Query: 2   SVTAFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYP 61
           + T FERISYTEA++LLE+AV+  K+FENKVEWGIDLASEHER+LTEVLF+KPVIV++YP
Sbjct: 352 ASTPFERISYTEAIKLLEEAVKKDKKFENKVEWGIDLASEHERFLTEVLFKKPVIVHDYP 411

Query: 62  KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWY 121
           KGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREER EVI++RI+EMGLPLEPYEWY
Sbjct: 412 KGIKAFYMRLNDDMKTVAAMDVLVPKVGELIGGSQREERYEVIEKRILEMGLPLEPYEWY 471

Query: 122 LDLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
           LDLRR+GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL
Sbjct: 472 LDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 517


>GSVIVT01004706001 assembled CDS
          Length = 584

 Score =  199 bits (507), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 106/163 (65%), Positives = 131/163 (80%), Gaps = 4/163 (2%)

Query: 6   FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQK-PVIVYNYPKGI 64
           F +++YT+AV+LL +A    K+FE  V+WG DL SEHERY+TEV F   PVI+ +YPK I
Sbjct: 425 FVQLTYTDAVELLLRA---NKKFEFPVKWGCDLQSEHERYITEVAFGGCPVIIRDYPKDI 481

Query: 65  KAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYLDL 124
           KAFYMR NDD KTVAAMD+LVP+VGELIGGSQREERLE +++R+ ++ L  + Y WYLDL
Sbjct: 482 KAFYMRRNDDGKTVAAMDMLVPRVGELIGGSQREERLEYLEERLDDLKLSKDSYWWYLDL 541

Query: 125 RRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
           RR+G+V H GFGLGFER++ FATGIDNIRD IPFPR PG A+ 
Sbjct: 542 RRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRTPGSAEF 584


>GSVIVT01005287001 assembled CDS
          Length = 145

 Score =  159 bits (402), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 97/128 (75%)

Query: 39  ASEHERYLTEVLFQKPVIVYNYPKGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQRE 98
           A  +  YL   ++++PVI++NYPK IK FYMR+NDD +TVAA DV+VPK G LI GSQ E
Sbjct: 17  AYNNGSYLVGEIYKRPVIIFNYPKKIKPFYMRVNDDGETVAAFDVVVPKAGTLIRGSQNE 76

Query: 99  ERLEVIQQRIVEMGLPLEPYEWYLDLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPF 158
           ER+ ++  RI E+G+  E YEWY+DLRR GTVK+ GF + FE ++LFATG+ N+ DVIPF
Sbjct: 77  ERMNMLSTRIKELGIRSEEYEWYMDLRRHGTVKNSGFSVAFEHVVLFATGLVNVADVIPF 136

Query: 159 PRYPGRAD 166
           PR  G+A+
Sbjct: 137 PRSYGKAN 144


>GSVIVT01013821001 assembled CDS
          Length = 496

 Score =  124 bits (310), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 68/75 (90%)

Query: 6   FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYPKGIK 65
           FERISY EA++LLE+AV+  K+FENKVEWGIDLASEHER+  EVLF+K VIV++YP+GIK
Sbjct: 356 FERISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHERFSAEVLFKKLVIVHDYPRGIK 415

Query: 66  AFYMRLNDDSKTVAA 80
           AFYMRLNDD KTVAA
Sbjct: 416 AFYMRLNDDMKTVAA 430


>GSVIVT01006160001 assembled CDS
          Length = 434

 Score =  110 bits (276), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 32/131 (24%)

Query: 4   TAFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYPKG 63
           ++FERISYT+AV  L++      +FE KVEWGI L  EHE YL   ++++PVI++NYPK 
Sbjct: 306 SSFERISYTQAVDALKQVTDN--KFETKVEWGISLTEEHETYLVGEIYKRPVIIFNYPKK 363

Query: 64  IKAFYMRLNDDSKTVAAMDVLVPKV------------------------------GELIG 93
           IK FYMR+NDD +TVAA DV+VPKV                              G LI 
Sbjct: 364 IKPFYMRVNDDGETVAAFDVVVPKVRVKFFLNLSLFLQTSNLIRTACNDSPLFVAGTLIR 423

Query: 94  GSQREERLEVI 104
           GSQ EER+ ++
Sbjct: 424 GSQNEERMNML 434


>GSVIVT01013293001 assembled CDS
          Length = 354

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/80 (62%), Positives = 63/80 (78%)

Query: 1   WSVTAFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNY 60
           +S   F R ++  A++LL++ V+  K+FENKVEWGIDLASEHER+ TE LF+K VIV++Y
Sbjct: 190 YSQDFFVRQAFLTAIKLLDEVVKKDKKFENKVEWGIDLASEHERFSTEELFKKLVIVHDY 249

Query: 61  PKGIKAFYMRLNDDSKTVAA 80
            KGIKAFYM LNDD KT AA
Sbjct: 250 LKGIKAFYMMLNDDMKTAAA 269


>GSVIVT01035583001 assembled CDS
          Length = 404

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 13/162 (8%)

Query: 8   RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKP----VIVYNYPKG 63
           R+ + E VQ+L       K+   +V+   DL +E ER L +++ +K      I++ YP  
Sbjct: 248 RLPFQEGVQML-------KEVGMEVDPYGDLNTEAERKLGQLVLEKYGTEFYILHRYPLA 300

Query: 64  IKAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYL 122
           ++ FY M   DD     + DV + +  E+I G+QR    + +++R    G+ ++    Y+
Sbjct: 301 VRPFYTMPSYDDPLYSNSFDVFI-RGEEIISGAQRVHVPDFLEKRAEACGIDVKTISTYI 359

Query: 123 DLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGR 164
           D  R+G   H GFG+G ER+++    ++NIR    FPR P R
Sbjct: 360 DSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPTR 401


>GSVIVT01023072001 assembled CDS
          Length = 447

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 37/41 (90%)

Query: 6   FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYL 46
           FERISY EA++LLE+AV+  K+FENKVEWGIDLASEH++ L
Sbjct: 393 FERISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHDQIL 433


>GSVIVT01036115001 assembled CDS
          Length = 262

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 37/42 (88%)

Query: 6   FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLT 47
           FERISY EA++LLE+AV+  K+FENKVEWGIDLASEH++ L 
Sbjct: 208 FERISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHDQILA 249