Jatropha Genome Database

JcCB0747201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0747201.10 - phase: 2 /partial
         (109 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01019757001 assembled CDS                                       209   2e-55

>GSVIVT01019757001 assembled CDS
          Length = 526

 Score =  209 bits (533), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 95/109 (87%), Positives = 103/109 (94%), Gaps = 2/109 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYFVYRKKKYIDCTGM+FRDF+AGKLP +PGELP  NDWENHLTTIFP
Sbjct: 329 FEQYVDYALDVPMYFVYRKKKYIDCTGMSFRDFIAGKLPSLPGELPNFNDWENHLTTIFP 388

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFW--IIYDEISLQHVLDMVADWT 107
           EVRLKRYLEMRGADGGPWRRLCALPAFW  I+YDE+SLQ+ LD++ADWT
Sbjct: 389 EVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEVSLQNALDIIADWT 437