Jatropha Genome Database
- JcCB0704941.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0704941.10 + phase: 0 /partial
(106 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01029482001 assembled CDS 134 6e-33
GSVIVT01029489001 assembled CDS 130 9e-32
GSVIVT01029491001 assembled CDS 130 1e-31
GSVIVT01029509001 assembled CDS 129 2e-31
GSVIVT01029474001 assembled CDS 129 4e-31
GSVIVT01035579001 assembled CDS 127 9e-31
GSVIVT01029488001 assembled CDS 126 2e-30
GSVIVT01021495001 assembled CDS 124 6e-30
GSVIVT01021494001 assembled CDS 123 1e-29
GSVIVT01029508001 assembled CDS 123 1e-29
GSVIVT01021474001 assembled CDS 123 2e-29
GSVIVT01029510001 assembled CDS 123 2e-29
GSVIVT01032217001 assembled CDS 117 8e-28
GSVIVT01032285001 assembled CDS 115 3e-27
GSVIVT01001721001 assembled CDS 115 3e-27
GSVIVT01029514001 assembled CDS 112 5e-26
GSVIVT01029525001 assembled CDS 111 8e-26
GSVIVT01029468001 assembled CDS 110 9e-26
GSVIVT01029524001 assembled CDS 109 3e-25
GSVIVT01015994001 assembled CDS 108 3e-25
GSVIVT01029527001 assembled CDS 107 1e-24
GSVIVT01029494001 assembled CDS 94 2e-20
GSVIVT01021473001 assembled CDS 79 5e-16
GSVIVT01029517001 assembled CDS 60 2e-10
GSVIVT01021484001 assembled CDS 49 3e-07
GSVIVT01029518001 assembled CDS 47 2e-06
>GSVIVT01029482001 assembled CDS
Length = 394
Score = 134 bits (338), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 GERVIFHVQTRNMFLLRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTEL 60
GE I Q +N+ L NLVQT WALMGL+ GQ E DP PLH AAKLLINSQ E
Sbjct: 282 GESYI-SCQDKNLTPLEGNKSNLVQTGWALMGLLSSGQAERDPTPLHRAAKLLINSQMED 340
Query: 61 GDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEY 95
GDFPQQEI G +MKNCM+HYA YRNIFPLWALAEY
Sbjct: 341 GDFPQQEITGAFMKNCMLHYADYRNIFPLWALAEY 375
>GSVIVT01029489001 assembled CDS
Length = 872
Score = 130 bits (328), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 GERVIFHVQTRNMFLLRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTEL 60
GE I Q + + L NLVQT WALMGL+ GQ E DP PLH AAKLLINSQ E
Sbjct: 735 GESYI-SCQDKKLTHLEGNKSNLVQTGWALMGLLSSGQAERDPTPLHRAAKLLINSQMED 793
Query: 61 GDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEY 95
GDFPQQEI G +MKNCM+HYA YRNIFPLWALAEY
Sbjct: 794 GDFPQQEITGAFMKNCMLHYADYRNIFPLWALAEY 828
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 12/53 (22%)
Query: 43 PAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEY 95
P PLH +L ++EI G +MKNCM+HYAAYRNIFPLWALA+Y
Sbjct: 12 PTPLHKPIRL------------RKEITGAFMKNCMLHYAAYRNIFPLWALAQY 52
>GSVIVT01029491001 assembled CDS
Length = 512
Score = 130 bits (326), Expect = 1e-31, Method: Composition-based stats.
Identities = 57/74 (77%), Positives = 61/74 (82%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
NLVQT WALMGL+ GQ E DP PLH AAKL INSQ E GDFPQQEI G +MKNC++HYA
Sbjct: 420 NLVQTGWALMGLLSSGQAERDPTPLHRAAKLFINSQMEDGDFPQQEITGAFMKNCLLHYA 479
Query: 82 AYRNIFPLWALAEY 95
YRNIFPLWALAEY
Sbjct: 480 DYRNIFPLWALAEY 493
>GSVIVT01029509001 assembled CDS
Length = 846
Score = 129 bits (325), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 64/76 (84%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
NLV T WALMGLI GQ E DP PLH AAKLLIN Q E GDFPQQEI GV+MKNCM+HYA
Sbjct: 766 NLVHTGWALMGLISSGQAERDPTPLHRAAKLLINFQMEDGDFPQQEITGVFMKNCMLHYA 825
Query: 82 AYRNIFPLWALAEYRQ 97
AYRNI+PLWALAEYR+
Sbjct: 826 AYRNIYPLWALAEYRR 841
>GSVIVT01029474001 assembled CDS
Length = 885
Score = 129 bits (323), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 1 GERVIFHVQTRNMFLLRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTEL 60
GE I Q + L+ NLVQT WALMGL+ GQ E DP PLH AAKLLINSQ E
Sbjct: 773 GESYI-SCQEKKHTPLKGNKSNLVQTGWALMGLLSSGQAERDPTPLHRAAKLLINSQMED 831
Query: 61 GDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEY 95
GDFPQQEI G ++KNCM HYA YRNIFPLWALAEY
Sbjct: 832 GDFPQQEITGAFLKNCMSHYADYRNIFPLWALAEY 866
>GSVIVT01035579001 assembled CDS
Length = 156
Score = 127 bits (320), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
NLVQTAW+LMGLI GQ E DP PLH AAKLLINSQ E GDFPQQEI G +++NCM+HYA
Sbjct: 57 NLVQTAWSLMGLIPAGQAERDPPPLHRAAKLLINSQMENGDFPQQEITGAFLRNCMLHYA 116
Query: 82 AYRNIFPLWALAEYRQH 98
AYR++FPLWA+ EYR
Sbjct: 117 AYRSVFPLWAIGEYRSR 133
>GSVIVT01029488001 assembled CDS
Length = 769
Score = 126 bits (316), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 63/80 (78%)
Query: 16 LRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKN 75
L+ NLVQT WALMGL+ GQ E DP PLH AAKLLINSQ E GDFPQQEI G +MKN
Sbjct: 671 LKGNRSNLVQTGWALMGLLSSGQAERDPTPLHKAAKLLINSQMEDGDFPQQEITGAFMKN 730
Query: 76 CMVHYAAYRNIFPLWALAEY 95
CM+HYA YRN FPLWALA+Y
Sbjct: 731 CMLHYATYRNTFPLWALAQY 750
>GSVIVT01021495001 assembled CDS
Length = 8241
Score = 124 bits (312), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 62/76 (81%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
NLVQTAW LMGLI GQ E DP PLH AAKLLINSQ + GDFPQ+EI GVYM NCM+HYA
Sbjct: 8157 NLVQTAWCLMGLIEAGQVERDPTPLHKAAKLLINSQLDNGDFPQEEITGVYMNNCMLHYA 8216
Query: 82 AYRNIFPLWALAEYRQ 97
+YRNIFP WAL YR+
Sbjct: 8217 SYRNIFPTWALGMYRR 8232
>GSVIVT01021494001 assembled CDS
Length = 759
Score = 123 bits (309), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Query: 7 HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
++ +M + + G NLVQTAW LMGLI GQ E DP PLH AAKLLINSQ + GDFP
Sbjct: 658 YLSCPDMVYVHLEGDHTNLVQTAWCLMGLIEAGQVESDPTPLHKAAKLLINSQLDNGDFP 717
Query: 65 QQEILGVYMKNCMVHYAAYRNIFPLWALAEYRQ 97
Q+E+ GVYM NCM HYA+YRNIFP WAL YR+
Sbjct: 718 QEEVTGVYMNNCMQHYASYRNIFPTWALGMYRR 750
>GSVIVT01029508001 assembled CDS
Length = 910
Score = 123 bits (309), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 GERVIFHVQTRNMFLLRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTEL 60
GE I + + L NLVQT WALMGL+ GQ E DP PLH AAKLLINSQ E
Sbjct: 798 GESYI-SCRDKKYTPLEGNKSNLVQTGWALMGLLSSGQAERDPTPLHRAAKLLINSQMED 856
Query: 61 GDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEY 95
GDFPQQEI G +M NCM+H A YRNIFPLWALAEY
Sbjct: 857 GDFPQQEITGAFMNNCMLHCADYRNIFPLWALAEY 891
>GSVIVT01021474001 assembled CDS
Length = 759
Score = 123 bits (308), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Query: 7 HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
++ +M + + G NLVQTAW LMGLI GQ E DP PLH AAKLLINSQ + GDFP
Sbjct: 658 YLSCPDMVYVHLEGDRTNLVQTAWCLMGLIEAGQVEKDPTPLHKAAKLLINSQLDSGDFP 717
Query: 65 QQEILGVYMKNCMVHYAAYRNIFPLWALAEYRQ 97
Q+EI GVYM NCM+HYA+YRNIFP WAL Y +
Sbjct: 718 QEEITGVYMNNCMLHYASYRNIFPTWALGMYHR 750
>GSVIVT01029510001 assembled CDS
Length = 814
Score = 123 bits (308), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 21 QNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHY 80
NL+QT W LMGL+H GQ E DP PLH AAKLLINSQ E GDFPQQEI+G +K CM+HY
Sbjct: 733 SNLIQTGWTLMGLLHSGQAERDPTPLHRAAKLLINSQMEDGDFPQQEIVGASLKTCMIHY 792
Query: 81 AAYRNIFPLWALAEYRQ 97
RNI+PLWA+AEYRQ
Sbjct: 793 PTCRNIYPLWAIAEYRQ 809
>GSVIVT01032217001 assembled CDS
Length = 801
Score = 117 bits (294), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
NLV T+WAL+ LI GGQ EIDP P+H ++LINSQ E GDFPQQEI GV+MKNC ++Y+
Sbjct: 723 NLVNTSWALLALIEGGQAEIDPTPIHRGMRVLINSQMEDGDFPQQEITGVFMKNCTLNYS 782
Query: 82 AYRNIFPLWALAEYRQ 97
+YRNIFP+WAL EY +
Sbjct: 783 SYRNIFPIWALGEYSR 798
>GSVIVT01032285001 assembled CDS
Length = 760
Score = 115 bits (289), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%)
Query: 21 QNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHY 80
++V TAWA++ LI GQ E DP PLH AA++LINSQ E GDFPQ+EI+GV+ +NCM+ Y
Sbjct: 675 SHVVNTAWAMLALIDAGQAERDPTPLHRAARVLINSQMENGDFPQEEIMGVFNRNCMITY 734
Query: 81 AAYRNIFPLWALAEYR 96
AAYRNIFP+WAL EYR
Sbjct: 735 AAYRNIFPIWALGEYR 750
>GSVIVT01001721001 assembled CDS
Length = 184
Score = 115 bits (289), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%)
Query: 23 LVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAA 82
LV T WA++ LI GQ E DP PLH A KLLINSQ E GDFPQQ+I+GV NCM+ Y+A
Sbjct: 99 LVHTRWAMLALIRAGQEERDPTPLHRATKLLINSQMEDGDFPQQDIIGVLKNNCMISYSA 158
Query: 83 YRNIFPLWALAEYRQHFSFSSKS 105
YRNIFP+WALAEY H S+S
Sbjct: 159 YRNIFPIWALAEYLNHVILLSRS 181
>GSVIVT01029514001 assembled CDS
Length = 757
Score = 112 bits (279), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 60/80 (75%)
Query: 24 VQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAY 83
TAWA++ LI GQ E DP PLH AA+LLINSQ + GDFPQ+EI+GV+ KNCM Y+AY
Sbjct: 678 CNTAWAMLALIDAGQAERDPNPLHRAARLLINSQMKNGDFPQEEIMGVFNKNCMNSYSAY 737
Query: 84 RNIFPLWALAEYRQHFSFSS 103
RNIFP+WAL EYR SS
Sbjct: 738 RNIFPIWALGEYRSRVLHSS 757
>GSVIVT01029525001 assembled CDS
Length = 802
Score = 111 bits (277), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%)
Query: 24 VQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAY 83
V TAWA++ LI GQ DP PLH AA++LINSQ + GDFPQ+EI+GV+ KNCM+ Y+AY
Sbjct: 723 VNTAWAMLALIDAGQAGRDPNPLHRAARILINSQMKNGDFPQEEIMGVFNKNCMISYSAY 782
Query: 84 RNIFPLWALAEYRQHFSFSS 103
RNIFP+WAL EYR SS
Sbjct: 783 RNIFPIWALGEYRYRVLHSS 802
>GSVIVT01029468001 assembled CDS
Length = 560
Score = 110 bits (276), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%)
Query: 23 LVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAA 82
+V TAWA++ LI GQ DP PLH AA++LINSQ + GDFPQ+EI+GV+ KNCM++Y+A
Sbjct: 480 IVNTAWAMLALIEAGQAGRDPNPLHRAARILINSQMKNGDFPQEEIMGVFNKNCMINYSA 539
Query: 83 YRNIFPLWALAEYRQHFSFSS 103
YRNIFP+WAL E+R SS
Sbjct: 540 YRNIFPIWALGEHRSRVLHSS 560
>GSVIVT01029524001 assembled CDS
Length = 802
Score = 109 bits (272), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 22 NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
N V TAWA++ LI GQ DP PLH AA++LINSQ + GDFPQ+EI+G + KNC + Y+
Sbjct: 721 NNVNTAWAMLALIDAGQAGRDPNPLHRAARILINSQMKNGDFPQEEIMGAFNKNCTISYS 780
Query: 82 AYRNIFPLWALAEYRQHFSFSS 103
AYRNIFP+WAL EYR SS
Sbjct: 781 AYRNIFPIWALGEYRSRVLHSS 802
>GSVIVT01015994001 assembled CDS
Length = 560
Score = 108 bits (271), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 60/80 (75%)
Query: 24 VQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAY 83
V TAWA++ LI GQ DP PLH AA++LINSQ + GDFPQ+EI+GV+ KNCM Y+AY
Sbjct: 481 VNTAWAMLVLIDAGQAGRDPNPLHRAARILINSQMKNGDFPQEEIMGVFNKNCMSSYSAY 540
Query: 84 RNIFPLWALAEYRQHFSFSS 103
RNIFP+WAL EYR SS
Sbjct: 541 RNIFPIWALGEYRSRVLHSS 560
>GSVIVT01029527001 assembled CDS
Length = 757
Score = 107 bits (267), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 60/80 (75%)
Query: 24 VQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAY 83
V TAWA++ LI GQ E D PLH AA++LINSQ + GDFPQ+EI+GV+ KNCM+ Y+ Y
Sbjct: 678 VNTAWAMLALIDAGQAERDANPLHRAARVLINSQMKNGDFPQEEIMGVFNKNCMISYSTY 737
Query: 84 RNIFPLWALAEYRQHFSFSS 103
RNIFP+WAL EY+ SS
Sbjct: 738 RNIFPIWALGEYQSRVLHSS 757
>GSVIVT01029494001 assembled CDS
Length = 68
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 44/55 (80%)
Query: 39 GEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAYRNIFPLWALA 93
E DP PLH AAKLLINSQ E GDFPQQEI G +MKNC++HYA YRN FPLW LA
Sbjct: 12 AERDPTPLHRAAKLLINSQMEDGDFPQQEITGAFMKNCVLHYATYRNTFPLWPLA 66
>GSVIVT01021473001 assembled CDS
Length = 753
Score = 78.6 bits (192), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 7 HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
++ +M + + G NLVQTAW LMGLI GQ E DP PLH AAKLLINSQ + GDFP
Sbjct: 658 YLSCPDMLYVHLEGDHTNLVQTAWCLMGLIEAGQVERDPTPLHNAAKLLINSQLDNGDFP 717
Query: 65 QQEIL 69
QQEIL
Sbjct: 718 QQEIL 722
>GSVIVT01029517001 assembled CDS
Length = 45
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 59 ELGDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEYRQ 97
E GDFPQQEI+G +K CM++Y YRNI+PL A+AEY Q
Sbjct: 2 EDGDFPQQEIVGASLKTCMIYYPIYRNIYPLRAIAEYHQ 40
>GSVIVT01021484001 assembled CDS
Length = 209
Score = 49.3 bits (116), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 71 VYMKNCMVHYAAYRNIFPLWALAEYRQ 97
VYM NCM+HY +YRNIFP WAL YR+
Sbjct: 140 VYMNNCMLHYVSYRNIFPTWALGMYRR 166
>GSVIVT01029518001 assembled CDS
Length = 101
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 20/27 (74%)
Query: 21 QNLVQTAWALMGLIHGGQGEIDPAPLH 47
NL+QT W LMGLIH GQ E DP PLH
Sbjct: 75 SNLIQTGWTLMGLIHSGQAERDPTPLH 101