Jatropha Genome Database

JcCB0603551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0603551.10 - phase: 0 /partial
         (212 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01003724001 assembled CDS                                       360   e-100
GSVIVT01003207001 assembled CDS                                       317   2e-87
GSVIVT01029152001 assembled CDS                                       316   6e-87
GSVIVT01003722001 assembled CDS                                       285   8e-78
GSVIVT01008323001 assembled CDS                                       179   1e-45
GSVIVT01031210001 assembled CDS                                       176   5e-45
GSVIVT01007816001 assembled CDS                                       176   1e-44
GSVIVT01008324001 assembled CDS                                       173   5e-44
GSVIVT01008322001 assembled CDS                                       159   8e-40
GSVIVT01003208001 assembled CDS                                        51   3e-07

>GSVIVT01003724001 assembled CDS
          Length = 381

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/206 (85%), Positives = 189/206 (91%), Gaps = 1/206 (0%)

Query: 8   SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRS-PPKIQGPEGKRL 66
           SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKL  RS PP+IQ P GK L
Sbjct: 37  SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLVGRSSPPRIQAPGGKNL 96

Query: 67  QLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDFNE 126
           QLHF+TRMPPHLFTGGKV+GEQGA+I VVLLD  T  VVQ G ESAAKLNVVVLEGDFNE
Sbjct: 97  QLHFKTRMPPHLFTGGKVEGEQGASILVVLLDVDTSSVVQTGPESAAKLNVVVLEGDFNE 156

Query: 127 EADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFRL 186
           E+D+DWT EHFESHEVKEREGKRPLLTG+LQVTLKEG+GTLGDLTFTDNSSWIRSRKFRL
Sbjct: 157 ESDDDWTKEHFESHEVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRL 216

Query: 187 GLKVSPGYCEGIRVREAKTEAFAGKD 212
           G+K++PGYCE + +REAKTEAFA KD
Sbjct: 217 GVKIAPGYCEDVHIREAKTEAFAVKD 242


>GSVIVT01003207001 assembled CDS
          Length = 636

 Score =  317 bits (813), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 157/206 (76%), Positives = 178/206 (86%), Gaps = 1/206 (0%)

Query: 8   SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPPK-IQGPEGKRL 66
           SVIVEALKVDSLQ+LCSSLEP+ RR+VSEEVERAL +LG AKL  RS PK I+GP+G+ L
Sbjct: 38  SVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNL 97

Query: 67  QLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDFNE 126
           QL FR+R+   LFTGGKV+GEQG  IH+VLLDASTG VV +G ES+ KL+VVVLEGDFN 
Sbjct: 98  QLQFRSRLSLPLFTGGKVEGEQGTTIHIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNN 157

Query: 127 EADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFRL 186
           E D+ W  E FESH VKEREGKRPLLTG+LQVTLKEGVGTLG+LTFTDNSSWIRSRKFRL
Sbjct: 158 EDDDGWNQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRL 217

Query: 187 GLKVSPGYCEGIRVREAKTEAFAGKD 212
           GLKV+ GYCEG+R+REAKT+AF  KD
Sbjct: 218 GLKVASGYCEGMRIREAKTDAFTVKD 243


>GSVIVT01029152001 assembled CDS
          Length = 628

 Score =  316 bits (809), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 156/206 (75%), Positives = 180/206 (87%), Gaps = 1/206 (0%)

Query: 8   SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPPK-IQGPEGKRL 66
           SVIVEALKVDSLQ+LCSSLEP+ RR+VSEEVERAL +LG A+L  RS PK I+GP+G+ L
Sbjct: 25  SVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLNGRSSPKRIEGPDGRNL 84

Query: 67  QLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDFNE 126
           QL FR+R+   LFTGGKV+GEQGAAIH+VL+DA++G VV +G ES+ KL+VVVLEGDFN 
Sbjct: 85  QLQFRSRLSLPLFTGGKVEGEQGAAIHIVLVDANSGSVVTSGPESSVKLDVVVLEGDFNN 144

Query: 127 EADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFRL 186
           E +E WT E F+SH VKEREGKRPLLTG+LQVTLKEGVGTLGDLTFTDNSSWIRSRKFRL
Sbjct: 145 EDEEGWTQEEFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRL 204

Query: 187 GLKVSPGYCEGIRVREAKTEAFAGKD 212
           GLKV+ G+CEGI +REAKTEAF  KD
Sbjct: 205 GLKVALGFCEGIHIREAKTEAFTVKD 230


>GSVIVT01003722001 assembled CDS
          Length = 503

 Score =  285 bits (730), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 149/167 (89%), Gaps = 1/167 (0%)

Query: 46  GHAKLATRSPPKIQGPEGKRLQLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVV 105
           GH  L + SPP+IQ P GK LQLHF+TRMPPHLFTGGKV+GEQGA+I VVLLD  T  VV
Sbjct: 9   GHVSLMS-SPPRIQAPGGKNLQLHFKTRMPPHLFTGGKVEGEQGASILVVLLDVDTSSVV 67

Query: 106 QAGQESAAKLNVVVLEGDFNEEADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVG 165
           Q G ESAAKLNVVVLEGDFNEE+D+DWT EHFESHEVKEREGKRPLLTG+LQVTLKEG+G
Sbjct: 68  QTGPESAAKLNVVVLEGDFNEESDDDWTKEHFESHEVKEREGKRPLLTGDLQVTLKEGIG 127

Query: 166 TLGDLTFTDNSSWIRSRKFRLGLKVSPGYCEGIRVREAKTEAFAGKD 212
           TLGDLTFTDNSSWIRSRKFRLG+K++PGYCE + +REAKTEAFA KD
Sbjct: 128 TLGDLTFTDNSSWIRSRKFRLGVKIAPGYCEDVHIREAKTEAFAVKD 174


>GSVIVT01008323001 assembled CDS
          Length = 469

 Score =  179 bits (453), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 5/208 (2%)

Query: 8   SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPP-KIQGPEGKRL 66
           S+I E  + +S Q +C++LEP+ RR+V+EEVER L R   A+  T SP  +I GPE   L
Sbjct: 31  SIIGETFRGNSWQNICTALEPMLRRVVNEEVERGLVR--GARSLTWSPSLRIHGPEPSNL 88

Query: 67  QLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDF-- 124
           QL F   +   +FTG K+   +   + + ++D S    VQ       +L++VVL+GDF  
Sbjct: 89  QLIFSKNLSLPIFTGAKIRDAENNPLLLCIVDKSGDEAVQTTLPYPIQLDIVVLDGDFPH 148

Query: 125 NEEADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKF 184
            E  +  W++E F +  VKER GKRPLL G++ VT+++G   +GD+ FTDNS WIR RKF
Sbjct: 149 GELTNSTWSMEEFNNSIVKERTGKRPLLVGDVLVTMRDGFAVVGDIEFTDNSHWIRGRKF 208

Query: 185 RLGLKVSPGYCEGIRVREAKTEAFAGKD 212
           RLG +V PG C G+R+ EA TE FA +D
Sbjct: 209 RLGARVVPGSCHGVRILEAFTEPFAVRD 236


>GSVIVT01031210001 assembled CDS
          Length = 589

 Score =  176 bits (447), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 131/195 (67%), Gaps = 2/195 (1%)

Query: 19  LQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPPKIQGPEGKRLQLHFRTRMPPHL 78
           L+ +   +EP FR +V EEVERA +RL        S  +I+    +  QLHF +++P  +
Sbjct: 50  LKEMALRMEPFFRVLVREEVERA-SRLFLNASPGPSSNQIESSGVRNWQLHFASKLPSKI 108

Query: 79  FTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDFNEEAD-EDWTLEHF 137
           FTG +V+ E   ++ +V+LDA +  ++ +G  S+ K+ ++VL+GDF    D EDWT   F
Sbjct: 109 FTGSRVEAEGSTSVKIVILDARSKDIITSGPLSSVKIEILVLDGDFGTTDDNEDWTESEF 168

Query: 138 ESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSPGYCEG 197
            ++ V+EREGKRPL+TGEL VTL+ GVG + D++FTDNSSWIRSRKFRLG +   G  + 
Sbjct: 169 NTNIVREREGKRPLVTGELFVTLRCGVGYIDDVSFTDNSSWIRSRKFRLGARAVSGISKE 228

Query: 198 IRVREAKTEAFAGKD 212
           +R+REA++EAF  KD
Sbjct: 229 VRIREARSEAFVVKD 243


>GSVIVT01007816001 assembled CDS
          Length = 392

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 143/208 (68%), Gaps = 6/208 (2%)

Query: 8   SVIVEALKV-DSLQRLCSS-LEPLFRRIVSEEVERALTRLGHAKLATRSPPKIQGP-EGK 64
           + I+E +K+  S+Q L    LEPL R++V EEVE AL +  H     R+  K   P E +
Sbjct: 31  NAILEVMKMQSSVQHLMEPILEPLIRKVVKEEVETALRK--HLSNMKRNFEKELHPFESR 88

Query: 65  RLQLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDF 124
            LQL F   +   +FTG +++GE  ++I V L+D  TG VV++G ES+A++ +VVLEGDF
Sbjct: 89  SLQLQFSNALSLPVFTGTRIEGEDCSSIQVALVDGLTGEVVKSGPESSARVEIVVLEGDF 148

Query: 125 NEEADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKF 184
           + +  ++WTLE F+++ V+EREGK+PLLTG+  + LK+GVG + +++FTDNSSW RSRKF
Sbjct: 149 DGDEGDNWTLEEFKNNIVREREGKKPLLTGDAFLNLKDGVGFVSEISFTDNSSWTRSRKF 208

Query: 185 RLGLKVSPGYCEGIRVREAKTEAFAGKD 212
           RLG +V     +G R+REAKTE+F  +D
Sbjct: 209 RLGARVVDN-SDGTRIREAKTESFIVRD 235


>GSVIVT01008324001 assembled CDS
          Length = 469

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 133/207 (64%), Gaps = 4/207 (1%)

Query: 7   TSVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPP-KIQGPEGKR 65
           TSVI E L  +S Q +C++LEP+ RR+V+EEVER +     +   TRSP  +IQ  E   
Sbjct: 29  TSVIGEVLMGNSFQNICTALEPMLRRVVNEEVERGIR---SSCTFTRSPSLRIQALEASN 85

Query: 66  LQLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDASTGCVVQAGQESAAKLNVVVLEGDFN 125
           LQL F  R+   +FTG K+   + + + + +++ S   +V      + K+ +VVL+GDF 
Sbjct: 86  LQLIFTKRLSLPIFTGTKIGYAENSPLQLHIVETSGDQMVPTTLPYSIKVEIVVLDGDFP 145

Query: 126 EEADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFR 185
           +     W+ + FE + V+ER GKRPLL G++ VT+++G+  +GD+ FTDNSSWIRSRKFR
Sbjct: 146 QGDCNTWSSKEFEDNIVRERTGKRPLLAGDVIVTMRDGLAMIGDIEFTDNSSWIRSRKFR 205

Query: 186 LGLKVSPGYCEGIRVREAKTEAFAGKD 212
           LG +V PG    + +REA TEAFA KD
Sbjct: 206 LGARVVPGSRHDVSIREAITEAFAVKD 232


>GSVIVT01008322001 assembled CDS
          Length = 470

 Score =  159 bits (403), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 129/208 (62%), Gaps = 8/208 (3%)

Query: 8   SVIVEALKVDSLQRLCSSLEPLFRRIVSEEVERALTRLGHAKLATRSPP-KIQGPEGKRL 66
           SV  E L  + ++  C++LEP+ R++V EEVE+ + +       T+SP  +IQ PE   +
Sbjct: 30  SVFGEVLTGNFVENFCTTLEPMLRKVVVEEVEKGIRKCRF----TKSPSFRIQAPEPSTM 85

Query: 67  QLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDAS--TGCVVQAGQESAAKLNVVVLEGDF 124
           +L F   +   +FTG K+  ++   + +++ D S     +++A   S  K+ ++VL+GDF
Sbjct: 86  RLTFTKNLSLPIFTGTKIVNDENKPLQLIIEDTSGDNQNILRALSHSF-KVEIIVLDGDF 144

Query: 125 NEEADEDWTLEHFESHEVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKF 184
                E+W+ E F++  VKER GKRPLL G++ VT++ G   +GD+ FTDNSSWIRSR F
Sbjct: 145 PGGDRENWSTEEFDNSIVKERAGKRPLLAGDVLVTMRGGAAVIGDIEFTDNSSWIRSRNF 204

Query: 185 RLGLKVSPGYCEGIRVREAKTEAFAGKD 212
           RLG +V P  C+  R+REA TEAF  KD
Sbjct: 205 RLGARVVPDSCKEFRIREAITEAFVVKD 232


>GSVIVT01003208001 assembled CDS
          Length = 65

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/27 (85%), Positives = 26/27 (96%)

Query: 8  SVIVEALKVDSLQRLCSSLEPLFRRIV 34
          SVIVEALKVDSLQ+LCSSLEP+ RR+V
Sbjct: 38 SVIVEALKVDSLQKLCSSLEPILRRVV 64