Jatropha Genome Database

JcCB0582061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0582061.10 + phase: 1 /partial
         (206 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01014837001 assembled CDS                                       321   2e-88
GSVIVT01033791001 assembled CDS                                       257   3e-69
GSVIVT01024174001 assembled CDS                                       217   4e-57
GSVIVT01011810001 assembled CDS                                       170   3e-43
GSVIVT01018820001 assembled CDS                                       152   1e-37

>GSVIVT01014837001 assembled CDS
          Length = 357

 Score =  321 bits (822), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 164/206 (79%), Positives = 174/206 (84%), Gaps = 1/206 (0%)

Query: 1   EPSQLSINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKAL 60
           EPS+LSI +NA GLARYAIICQENGLVPIVEPEIL DG HDIKKCA VTE VLAA YKAL
Sbjct: 153 EPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGDHDIKKCAAVTETVLAAVYKAL 212

Query: 61  NDHHVLLEGTLLKPNMVTPGSESAKVAPEVIAEYTVRALQCTVPAAVPAVVFLSGGQSEE 120
           NDHHVLLEGTLLKPNMVTPGS   KV+ EVIAEYTV AL+ TVP AVP +VFLSGGQSEE
Sbjct: 213 NDHHVLLEGTLLKPNMVTPGSAGPKVSSEVIAEYTVAALRRTVPPAVPGIVFLSGGQSEE 272

Query: 121 EATVNLNAMNKLKTKKPWSLSFSFGRALQQSTLKAWAGKPENVQKAQAAFLVRAKANSEA 180
           EAT+NLNAMNKL+  KPW+LSFSFGRALQQSTLK W GK ENV KAQ AFL R KANSEA
Sbjct: 273 EATLNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKTENVGKAQGAFLGRCKANSEA 332

Query: 181 TLGTYQGNATLGEGASESLHVKDYKY 206
           TLG Y+G    G  ASESL+VK YKY
Sbjct: 333 TLGKYEGGTGGGL-ASESLYVKGYKY 357


>GSVIVT01033791001 assembled CDS
          Length = 335

 Score =  257 bits (657), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 141/168 (83%), Gaps = 18/168 (10%)

Query: 1   EPSQLSINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKAL 60
           EPS+L+I+ENA GLARYA+ICQENGL                  CA VTERVLAACYKAL
Sbjct: 153 EPSELAIHENAYGLARYAMICQENGL------------------CAYVTERVLAACYKAL 194

Query: 61  NDHHVLLEGTLLKPNMVTPGSESAKVAPEVIAEYTVRALQCTVPAAVPAVVFLSGGQSEE 120
           NDHHVLLEGTLLKPNMVTPGSE+ KV+PEV+AEYTVR LQ TVPAAVPA+VFLSGGQSEE
Sbjct: 195 NDHHVLLEGTLLKPNMVTPGSEAKKVSPEVVAEYTVRTLQRTVPAAVPAIVFLSGGQSEE 254

Query: 121 EATVNLNAMNKLKTKKPWSLSFSFGRALQQSTLKAWAGKPENVQKAQA 168
           EAT+NLNAMNKLK KKPW+LSFSFGRALQQSTLKAW+GK ENV KA+ 
Sbjct: 255 EATLNLNAMNKLKGKKPWNLSFSFGRALQQSTLKAWSGKEENVVKARG 302


>GSVIVT01024174001 assembled CDS
          Length = 267

 Score =  217 bits (552), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 110/206 (53%), Positives = 147/206 (71%), Gaps = 4/206 (1%)

Query: 2   PSQLSINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 61
           PS L++ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++V A  +  L 
Sbjct: 65  PSALALKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIERTFEVAQKVWAEVFFYLA 124

Query: 62  DHHVLLEGTLLKPNMVTPGSE-SAKVAPEVIAEYTVRALQCTVPAAVPAVVFLSGGQSEE 120
           +++V+ EG LLKP+MVTPG+E   +  PE +A+YT++ L+  +P AVP ++FLSGGQSE 
Sbjct: 125 ENNVMFEGILLKPSMVTPGAECKDRATPEQVADYTLKLLKRRIPPAVPGIMFLSGGQSEV 184

Query: 121 EATVNLNAMNKLKTKKPWSLSFSFGRALQQSTLKAWAGKPENVQKAQAAFLVRAKANSEA 180
           EAT+NLNAMN  +   PW +SFS+ RALQ + LK W G+PE+V++AQ A L+RAKANS A
Sbjct: 185 EATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPESVKEAQEALLIRAKANSLA 242

Query: 181 TLGTYQGNATLGEGASESLHVKDYKY 206
            LG Y G     E A + + VK Y Y
Sbjct: 243 QLGKYTGEGE-SEEAKKGMFVKGYVY 267


>GSVIVT01011810001 assembled CDS
          Length = 367

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 125/206 (60%), Gaps = 30/206 (14%)

Query: 2   PSQLSINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 61
           PS L++ E A GLARYA I Q+NGLVPIVEPEIL+DG H I +  +V E+V +  +  L 
Sbjct: 191 PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIDRTLEVAEKVWSEVFFYLA 250

Query: 62  DHHVLLEGTLLKPNMVTPGSE-SAKVAPEVIAEYTVRALQCTVPAAVPAVVFLSGGQSEE 120
            ++VL EG LLKP+MVTPG+E   K +PE IA+YT+  L+  VP AVP ++FLSGGQSE 
Sbjct: 251 QNNVLFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEV 310

Query: 121 EATVNLNAMNKLKTKKPWSLSFSFGRALQQSTLKAWAGKPENVQKAQAAFLVRAKANSEA 180
           EAT+NLNAMN+  +  PW +SFS+                           +RAKANS A
Sbjct: 311 EATLNLNAMNQ--SPNPWHVSFSYA--------------------------LRAKANSLA 342

Query: 181 TLGTYQGNATLGEGASESLHVKDYKY 206
            LG Y       E A + + V+ Y Y
Sbjct: 343 QLGKYSAEGE-SEEAKKGMFVQGYTY 367


>GSVIVT01018820001 assembled CDS
          Length = 349

 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 3/138 (2%)

Query: 2   PSQLSINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 61
           PS L++ E A GLARYA I Q+NGLVPIVEPEIL+DG H I +  +V ++V A  +  L 
Sbjct: 194 PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLA 253

Query: 62  DHHVLLEGTLLKPNMVTPGSESA-KVAPEVIAEYTVRALQCTVPAAVPAVVFLSGGQSEE 120
           +++V+ EG LLKP+MVTPG+E   K  PE +A+YT++ L   +P AVP ++FLSGGQSE 
Sbjct: 254 ENNVMFEGILLKPSMVTPGAECKDKATPEQVAQYTLKLLSRRIPPAVPGIMFLSGGQSEV 313

Query: 121 EATVNLNAMNKLKTKKPW 138
           EAT+NLNAMN  +   PW
Sbjct: 314 EATLNLNAMN--QAPNPW 329