Jatropha Genome Database

JcCB0574741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0574741.10 + phase: 2 /partial
         (260 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01027183001 assembled CDS                                       383   e-107
GSVIVT01038588001 assembled CDS                                       360   e-100
GSVIVT01019618001 assembled CDS                                       298   1e-81
GSVIVT01026540001 assembled CDS                                       231   2e-61
GSVIVT01014389001 assembled CDS                                       215   1e-56
GSVIVT01034183001 assembled CDS                                       131   4e-31
GSVIVT01003702001 assembled CDS                                        59   2e-09
GSVIVT01024219001 assembled CDS                                        56   2e-08
GSVIVT01017243001 assembled CDS                                        49   2e-06
GSVIVT01033690001 assembled CDS                                        47   7e-06

>GSVIVT01027183001 assembled CDS
          Length = 617

 Score =  383 bits (983), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/253 (71%), Positives = 206/253 (81%)

Query: 1   ARAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQV 60
            ++Q V+VR Y++R KELSALYMGQ+  AHEGSILTMKFSPDGQYL SAGED +VRVW V
Sbjct: 190 TKSQTVKVRPYRRRSKELSALYMGQDFVAHEGSILTMKFSPDGQYLGSAGEDRVVRVWLV 249

Query: 61  IESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKI 120
            ESERSD F   D+D S+ YFTVN  SE+VP+HADKEK  K K LRK+  +ACVI PQK+
Sbjct: 250 TESERSDGFDAPDVDCSYAYFTVNHLSELVPIHADKEKKGKLKTLRKSLDAACVIFPQKV 309

Query: 121 FQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTC 180
           FQI EKP+HEF+GH GEVLD+SWSKNKY+LSSS DKTVRLWQVGCN+CL+VFSHNNYVTC
Sbjct: 310 FQILEKPLHEFHGHCGEVLDISWSKNKYLLSSSVDKTVRLWQVGCNQCLKVFSHNNYVTC 369

Query: 181 VQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGN 240
           VQFNP+            KVRIW IPG QV+DW DITEIVTAVCYRPDGKG++VGSMTGN
Sbjct: 370 VQFNPVDDNYFISGSIDGKVRIWEIPGGQVVDWTDITEIVTAVCYRPDGKGVIVGSMTGN 429

Query: 241 CRFYDASGMSLFL 253
           CRFYDAS   L L
Sbjct: 430 CRFYDASDDRLQL 442


>GSVIVT01038588001 assembled CDS
          Length = 674

 Score =  360 bits (923), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/255 (66%), Positives = 200/255 (78%)

Query: 1   ARAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQV 60
           AR Q VRVR  +K+ KELSALY GQ++ AHEGSIL+MKFSPDG+YLASAGEDGIVR+WQV
Sbjct: 193 ARIQRVRVRQCRKQMKELSALYKGQDIQAHEGSILSMKFSPDGKYLASAGEDGIVRIWQV 252

Query: 61  IESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKI 120
           +E ERS++    +IDP  +YFTVN  SE+ PL A+KEK SK + LRK S SACVI P K+
Sbjct: 253 VEDERSNDHDIPEIDPMCIYFTVNHLSELTPLFAEKEKLSKLRSLRKTSDSACVIFPPKV 312

Query: 121 FQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTC 180
           F+I EKP+HEF+GH  E+LDLSWS N Y+LSSS DKTVRLW+VGC+ CL++FSHNNYVTC
Sbjct: 313 FRILEKPLHEFHGHSSEILDLSWSNNNYLLSSSIDKTVRLWRVGCDHCLKIFSHNNYVTC 372

Query: 181 VQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGN 240
           VQFNP+            KVRIW IPGCQV+DW DI E+VTAVCYRPDG+G +VGSMTG 
Sbjct: 373 VQFNPVDDNYFISGSIDGKVRIWAIPGCQVVDWTDIREMVTAVCYRPDGQGGIVGSMTGT 432

Query: 241 CRFYDASGMSLFLIS 255
           CRFY+ S   L L S
Sbjct: 433 CRFYNVSDNHLQLES 447


>GSVIVT01019618001 assembled CDS
          Length = 665

 Score =  298 bits (764), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 181/245 (73%), Gaps = 1/245 (0%)

Query: 1   ARAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQV 60
           A+ + VRV  Y+KR KELS+LY G+E AAH G ILTMKFS DG YLAS GEDGIVRVW++
Sbjct: 209 AKTRRVRVHPYRKRSKELSSLYKGREFAAHRGPILTMKFSLDGHYLASGGEDGIVRVWKI 268

Query: 61  IESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKI 120
           IE   S E    DIDPS VYFT N  SE+ PL  DKEK  K K L+++S S CVI+P K+
Sbjct: 269 IEDGSSKEVDIQDIDPSSVYFTRND-SELTPLDVDKEKRGKKKRLKRSSDSTCVIIPPKV 327

Query: 121 FQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTC 180
           F+I E+P+HEF GH G++LDLSWSK  Y+LSSSTDKTVRLWQVG  +CL+VF HN+YVTC
Sbjct: 328 FRILEEPLHEFQGHSGDILDLSWSKKGYLLSSSTDKTVRLWQVGQEQCLRVFYHNDYVTC 387

Query: 181 VQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGN 240
           V FNP+            KVRIW +   +V+DW DI +IVTAVCYRPDGKG +VGSM GN
Sbjct: 388 VDFNPVDDNYFISGSIDGKVRIWEVHRHKVVDWTDIRDIVTAVCYRPDGKGGIVGSMVGN 447

Query: 241 CRFYD 245
           C FYD
Sbjct: 448 CCFYD 452


>GSVIVT01026540001 assembled CDS
          Length = 668

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 122/252 (48%), Positives = 157/252 (62%), Gaps = 29/252 (11%)

Query: 2   RAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVI 61
           +   ++VR  KKR  E +AL +GQE+ AH+G I TMKFSPDGQYLAS GEDG+VR+W V 
Sbjct: 208 KINQMKVRQNKKRCMEFTALCIGQEIQAHKGFIWTMKFSPDGQYLASGGEDGVVRIWCVT 267

Query: 62  ESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIF 121
            +           D S  Y T   +    P +A                   V++P KIF
Sbjct: 268 ST-----------DASCKYLTTEGNFGCEPSYAP------------------VVIPDKIF 298

Query: 122 QISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCV 181
           QI E P+ EF+GH  +VLDL+WSK+  +LSSS DKTVRLWQVG + CL VF HNNYVTC+
Sbjct: 299 QIEESPLQEFHGHASDVLDLAWSKSNSLLSSSMDKTVRLWQVGHDECLNVFRHNNYVTCI 358

Query: 182 QFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNC 241
           QFNP+            KVRIW +   +V+DW D+ +++TA+CY+PDGKG +VGS+TG C
Sbjct: 359 QFNPVDDNYFISGSIDGKVRIWGVSERRVVDWADVRDVITAICYQPDGKGFIVGSVTGTC 418

Query: 242 RFYDASGMSLFL 253
            FY+ASG  L L
Sbjct: 419 CFYNASGNHLQL 430


>GSVIVT01014389001 assembled CDS
          Length = 749

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/260 (45%), Positives = 158/260 (60%), Gaps = 14/260 (5%)

Query: 4   QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
           + +RVR Y K  KEL+ALY  QE+ AH GSI ++KFS DG+YLASAGED ++ VWQV+E+
Sbjct: 264 ERIRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGRYLASAGEDCVIHVWQVVET 323

Query: 64  ERSDEFGRLDIDPS----HVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSAC------ 113
           ER  +   L   P     ++ F  +   E   +  + + NS  K  R  S  +       
Sbjct: 324 ERKGDL--LTEKPEDGNLNLLFVASGSPEPTSMSPNVDNNSSEKKRRGRSSVSRKSVSLD 381

Query: 114 -VILPQKIFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSST-DKTVRLWQVGCNRCLQV 171
            + +P+ +F +SEKP   F GH  +VLDLSWS     L SS+ DKTVRLW +    CL++
Sbjct: 382 HIKVPETVFGLSEKPFCSFQGHGDDVLDLSWSSKSQQLLSSSMDKTVRLWHLSSKSCLKI 441

Query: 172 FSHNNYVTCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKG 231
           FSH++YVTC+QFNP+            KVRIW+IP  QV+DW D+ E+VTA CY PDG+G
Sbjct: 442 FSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQG 501

Query: 232 LVVGSMTGNCRFYDASGMSL 251
            +VGS  G+CR Y+ S   L
Sbjct: 502 ALVGSYKGSCRLYNTSENKL 521


>GSVIVT01034183001 assembled CDS
          Length = 346

 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 88/129 (68%)

Query: 116 LPQKIFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHN 175
           +P+ +F + E P+  F GH  +VLDLSWS ++ +LSSS DKTVRLW +    CL++F+HN
Sbjct: 17  MPETVFSLLEIPVCSFKGHLDDVLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKLFAHN 76

Query: 176 NYVTCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVG 235
           +YVTC+QFNPM            KVRIW+IP  QV+DW D+ E+VTA  Y PDG+G ++G
Sbjct: 77  DYVTCIQFNPMDDKYFISGSLDAKVRIWSIPDRQVVDWTDLHEMVTAASYTPDGQGALIG 136

Query: 236 SMTGNCRFY 244
              G+CR Y
Sbjct: 137 LHQGSCRMY 145


>GSVIVT01003702001 assembled CDS
          Length = 313

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 26/230 (11%)

Query: 23  MGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVI-ESERSDEFGRLDIDPSHVYF 81
           + Q + AH+ ++  +KFS DG  L S+  D  +R W    +     EF   D   S + F
Sbjct: 14  LKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQEFHGHDQGISDLAF 73

Query: 82  TVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGHRGEVLDL 141
           + +S        A  +K  +  D+   S                  I    GH   V  +
Sbjct: 74  SSDSRHVC---SASDDKTVRLWDVETGS-----------------LIKTLQGHTNHVFCV 113

Query: 142 SWS-KNKYILSSSTDKTVRLWQVGCNRCLQVF-SHNNYVTCVQFNPMXXXXXXXXXXXXK 199
           +++ ++  I+S S D+TVR+W V   +CL+V  +H++ VT   FN               
Sbjct: 114 NFNPQSNMIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFN-RDGSLIVSSSYDGL 172

Query: 200 VRIW--TIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFYDAS 247
            RIW  +   C      D    V+ V + P+GK ++VG++    R ++ S
Sbjct: 173 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFS 222


>GSVIVT01024219001 assembled CDS
          Length = 477

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 3/123 (2%)

Query: 120 IFQISEKP--IHEFYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFSHNN 176
           +  +S+ P  I E  GH  +V D  +S  N+YI SSS DK+VR+W++    C++V    +
Sbjct: 193 VCTVSQPPSIIKELRGHSKDVTDFDFSSNNQYIASSSMDKSVRVWEISKGLCIRVIYGIS 252

Query: 177 YVTCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGS 236
              C++F+P+            ++ ++     +VI+     + VTAV +   G+ +  G 
Sbjct: 253 SQLCIRFHPVNNNFLSAGNANREITVFNFSTGRVINKAVFDDAVTAVDHDHTGQLIFCGD 312

Query: 237 MTG 239
             G
Sbjct: 313 AQG 315


>GSVIVT01017243001 assembled CDS
          Length = 816

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 27/232 (11%)

Query: 29  AHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESERSDEFGRLDIDPSHVYFTVNSHSE 88
            H   +  + +SPD Q LA+  +D  V+VW V                   + T + H+ 
Sbjct: 303 GHYFDVNCLAYSPDSQLLATGADDNKVKVWTV--------------SSGFCFVTFSEHTN 348

Query: 89  VV-PLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGHRGEVLDLSWSKNK 147
            V  LH     N         +  A  +   + F+    P         + + L+  ++ 
Sbjct: 349 AVTALHFMSNNNCLLSASLDGTVRAWDLFRYRNFRTFTTPSSR------QFVSLASDQSG 402

Query: 148 YILSSSTDKTVRL--WQVGCNRCLQVFS-HNNYVTCVQFNPMXXXXXXXXXXXXKVRIWT 204
            ++ + T  +  +  W +   R L + S H   V  + F+P              VR+W 
Sbjct: 403 EVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLMFSP-TNAILASSSWDKTVRLWD 461

Query: 205 I-PGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFYDA-SGMSLFLI 254
           +  G   ++  + T  V  V YRPDGK L   ++ G   F+D   G+ ++ I
Sbjct: 462 VFEGKGAVETFNHTHDVLTVVYRPDGKQLACSTLDGQIHFWDPIDGLLMYTI 513


>GSVIVT01033690001 assembled CDS
          Length = 883

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 27  VAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESERSDEFGRLDIDPSHVYFTVNSH 86
           V AH GS+ ++   PDG    +  ED  V+ W+   ++  ++         H    + SH
Sbjct: 414 VEAHGGSVRSIATIPDGNGFVTGSEDHEVKYWEYQYTQEPNQ---------HTKPLMLSH 464

Query: 87  SEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGHRGEVL--DLSWS 144
              + ++ D +  +   D +  + +      +  F  S K     YGH+  VL  D+S S
Sbjct: 465 VRTMKMNDDVQVVAVSPDAKYIAAALLDCTVKVFFMDSLKFFLSLYGHKLPVLCMDVS-S 523

Query: 145 KNKYILSSSTDKTVRLWQVGCNRCLQ-VFSHNNYVTCVQF 183
               +++ S DK +++W +    C + +F+H + V  VQF
Sbjct: 524 DGDLLVTGSADKNLKIWGLDFGDCHKSIFAHADSVMAVQF 563