Jatropha Genome Database
- JcCB0569561.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0569561.10 + phase: 2 /partial
(75 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01036283001 assembled CDS 154 6e-39
GSVIVT01000721001 assembled CDS 148 4e-37
GSVIVT01018101001 assembled CDS 148 6e-37
GSVIVT01017046001 assembled CDS 128 5e-31
GSVIVT01009238001 assembled CDS 124 9e-30
GSVIVT01015350001 assembled CDS 124 1e-29
GSVIVT01017159001 assembled CDS 114 1e-26
GSVIVT01015449001 assembled CDS 104 9e-24
GSVIVT01021779001 assembled CDS 91 8e-20
GSVIVT01018099001 assembled CDS 88 7e-19
GSVIVT01000720001 assembled CDS 86 4e-18
GSVIVT01027921001 assembled CDS 86 4e-18
GSVIVT01028432001 assembled CDS 82 7e-17
GSVIVT01017158001 assembled CDS 79 6e-16
GSVIVT01016972001 assembled CDS 63 3e-11
GSVIVT01035295001 assembled CDS 62 7e-11
GSVIVT01017711001 assembled CDS 60 2e-10
GSVIVT01028242001 assembled CDS 57 1e-09
GSVIVT01035866001 assembled CDS 52 5e-08
GSVIVT01011841001 assembled CDS 50 2e-07
GSVIVT01015573001 assembled CDS 49 4e-07
>GSVIVT01036283001 assembled CDS
Length = 170
Score = 154 bits (390), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 72/75 (96%), Positives = 75/75 (100%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
GSQGMKDFMNESKLIDLLNGS+YVPTYEDKDGDWMLVGDVPWEMF++SCKRLRIMKGSEA
Sbjct: 96 GSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEA 155
Query: 61 IGLAPRAVEKCKNRS 75
IGLAPRAVEKCKNRS
Sbjct: 156 IGLAPRAVEKCKNRS 170
>GSVIVT01000721001 assembled CDS
Length = 235
Score = 148 bits (374), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
GSQGMKDFMNESKL+DLLNG ++VPTYEDKDGDWMLVGDVPWEMF+DSCKRLRIMKG EA
Sbjct: 161 GSQGMKDFMNESKLMDLLNGFDHVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGKEA 220
Query: 61 IGLAPRAVEKCKNRS 75
IGLAPRA+EKCKNRS
Sbjct: 221 IGLAPRAMEKCKNRS 235
>GSVIVT01018101001 assembled CDS
Length = 237
Score = 148 bits (373), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 68/74 (91%), Positives = 72/74 (97%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
G+QGM DFMNESKL+DLLN SEYVPTYEDKDGDWMLVGDVPWEMF+DSCKRLRIMKGSEA
Sbjct: 163 GAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 222
Query: 61 IGLAPRAVEKCKNR 74
IGLAPRA+EKCKNR
Sbjct: 223 IGLAPRAMEKCKNR 236
>GSVIVT01017046001 assembled CDS
Length = 292
Score = 128 bits (322), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G+ +D + ES L+DLL+GSEYV TYEDKDGDWMLVGDVPWEMF +SCKRLRIMKGS
Sbjct: 216 GSHGLPGRDGLTESHLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKGS 275
Query: 59 EAIGLAPRAVEKCKNRS 75
EAIGLAPRA+EKCKNR+
Sbjct: 276 EAIGLAPRAMEKCKNRN 292
>GSVIVT01009238001 assembled CDS
Length = 318
Score = 124 bits (311), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G ++ ++ESKL DLL+GSEYV TYEDKDGDWMLVGDVPW+MFI++CKRLRIMK
Sbjct: 242 GSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWQMFIETCKRLRIMKSC 301
Query: 59 EAIGLAPRAVEKCKNRS 75
+AIGLAPRAVEKCKNR+
Sbjct: 302 DAIGLAPRAVEKCKNRN 318
>GSVIVT01015350001 assembled CDS
Length = 170
Score = 124 bits (311), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 70/77 (90%), Gaps = 2/77 (2%)
Query: 1 GSQG--MKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G ++D ++ES+L+DLL+GSEYV TYEDKDGDWMLVGDVPWEMF DSCKR+RIMK S
Sbjct: 94 GSNGVPIRDGLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRMRIMKSS 153
Query: 59 EAIGLAPRAVEKCKNRS 75
EAIGLAPRA+EKCK+R+
Sbjct: 154 EAIGLAPRAMEKCKSRN 170
>GSVIVT01017159001 assembled CDS
Length = 294
Score = 114 bits (284), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 62/71 (87%)
Query: 5 MKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
+++++NE KL+D + GS+Y+PTYED+DGDWMLVGDVPW+MF++SCKRLR+MK EAIGLA
Sbjct: 219 IRNYLNERKLMDPVKGSDYMPTYEDRDGDWMLVGDVPWKMFVESCKRLRLMKSIEAIGLA 278
Query: 65 PRAVEKCKNRS 75
PR +KC + S
Sbjct: 279 PRESQKCTSTS 289
>GSVIVT01015449001 assembled CDS
Length = 216
Score = 104 bits (259), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 54/59 (91%)
Query: 9 MNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRA 67
+ ESK+++ +NG+EYVPTYEDKDGDWMLVGDVPW MF++SCKR+R+MK SEAIGLAPR
Sbjct: 151 LEESKIMNPVNGAEYVPTYEDKDGDWMLVGDVPWNMFVESCKRVRLMKSSEAIGLAPRT 209
>GSVIVT01021779001 assembled CDS
Length = 199
Score = 91.3 bits (225), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 41/46 (89%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
NGSEY PTYEDKDGDWMLVGDVPW MFI SCKRLRIMKGSEA GL
Sbjct: 151 NGSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEARGLG 196
>GSVIVT01018099001 assembled CDS
Length = 192
Score = 88.2 bits (217), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 42/45 (93%)
Query: 20 GSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
GSEYVPTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGS+A GL
Sbjct: 145 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSDARGLG 189
>GSVIVT01000720001 assembled CDS
Length = 186
Score = 85.5 bits (210), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 38/41 (92%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSE 59
NGS+Y P YEDKDGDWMLVGDVPWEMFI SCKRLRIMKGSE
Sbjct: 146 NGSDYTPAYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSE 186
>GSVIVT01027921001 assembled CDS
Length = 283
Score = 85.5 bits (210), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 9 MNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRAV 68
N SKL+D SE+V TYEDK+GDWMLVGDVPW MF+ + KRLRIM+ SEA GLAPR
Sbjct: 215 TNPSKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAPRFQ 272
Query: 69 EKCKNR 74
E+ + +
Sbjct: 273 ERSERQ 278
>GSVIVT01028432001 assembled CDS
Length = 232
Score = 81.6 bits (200), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 4 GMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGL 63
M + SKL+D S++V TYEDK+GDWMLVGDVPW MF+ S +RLRIM+ S+A GL
Sbjct: 159 AMTESTRPSKLLD--GSSDFVLTYEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGL 216
Query: 64 APRAVEK 70
APR E+
Sbjct: 217 APRIQER 223
>GSVIVT01017158001 assembled CDS
Length = 101
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 37/42 (88%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
+ SEY+P YEDKDGDWMLVGDVPWEMFI+SCKRLRI K SE
Sbjct: 42 DSSEYIPIYEDKDGDWMLVGDVPWEMFIESCKRLRIKKKSET 83
>GSVIVT01016972001 assembled CDS
Length = 364
Score = 62.8 bits (151), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 4 GMKDFMNESKLID-LLNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAI 61
G++ E K I LL+GS EY YED +GD +LVGDVPW MF+++ KRLR++K SE
Sbjct: 286 GIQTKHEEEKTITGLLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELS 345
Query: 62 GL 63
L
Sbjct: 346 AL 347
>GSVIVT01035295001 assembled CDS
Length = 205
Score = 61.6 bits (148), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 4 GMKDFMNESK-LIDLLNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSE 59
G ++ M E+K + L +GS EY YED +GD MLVGDVPW MF+ + +RLR++K SE
Sbjct: 124 GNENKMEEAKTMAGLFDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVRRLRVLKSSE 181
>GSVIVT01017711001 assembled CDS
Length = 198
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKG 57
+G ++ TYEDK+GDWM+VGDVPWEMF+ + KRL+I +
Sbjct: 157 SGKYHILTYEDKEGDWMMVGDVPWEMFLTTVKRLKITRA 195
>GSVIVT01028242001 assembled CDS
Length = 175
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 23 YVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMK 56
+V TYEDK+GDWM+VGDVPWE+F+ + KRL+I +
Sbjct: 138 HVLTYEDKEGDWMMVGDVPWELFLTTVKRLKITR 171
>GSVIVT01035866001 assembled CDS
Length = 227
Score = 52.0 bits (123), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 22 EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMK 56
Y TY+DK+GDW+L GDVPW FI+S +RL +++
Sbjct: 190 HYTLTYQDKEGDWLLAGDVPWRTFIESVQRLELVR 224
>GSVIVT01011841001 assembled CDS
Length = 197
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 21 SEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
SE+ Y+D++ +W VGDVPW+ F+DS KRLRI++ +EA
Sbjct: 149 SEFALFYKDREENWRTVGDVPWKEFVDSIKRLRIVRKNEA 188
>GSVIVT01015573001 assembled CDS
Length = 184
Score = 48.9 bits (115), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 26 TYEDKDGDWMLVGDVPWEMFIDSCKRLRIMK 56
Y+D++GDW+L GDVPW FI S +RL+I++
Sbjct: 151 AYQDREGDWLLAGDVPWRTFIQSVERLKILR 181