Jatropha Genome Database

JcCB0546741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0546741.10 + phase: 0 
         (516 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01028441001 assembled CDS                                       614   e-176
GSVIVT01021573001 assembled CDS                                       517   e-147
GSVIVT01021569001 assembled CDS                                       502   e-142
GSVIVT01026388001 assembled CDS                                       447   e-126
GSVIVT01026384001 assembled CDS                                       445   e-125
GSVIVT01000454001 assembled CDS                                       210   2e-54
GSVIVT01026378001 assembled CDS                                       169   4e-42

>GSVIVT01028441001 assembled CDS
          Length = 508

 Score =  614 bits (1584), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 280/491 (57%), Positives = 362/491 (73%), Gaps = 16/491 (3%)

Query: 25  LNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETILQDV 84
           +++++ R   H +VDFIADYY++IE +PVLSQVEPGYLR  LP+SAP+ PES++ +  D+
Sbjct: 1   MDAEQLRENGHKMVDFIADYYKSIENFPVLSQVEPGYLRELLPDSAPNQPESLQQVFDDL 60

Query: 85  GKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESIVMD 144
              I+PG+THWQSPN+FAY+PS+ S A FLGEMLS G N+VGF+W++SPAATELE IV+D
Sbjct: 61  QAKILPGVTHWQSPNFFAYYPSNSSTAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLD 120

Query: 145 WLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVYGSDQ 204
           WL ++L LP  FL +GNGGGVI GT  EA+L  L+AARD+ L  +GK+ + KLVVYGSDQ
Sbjct: 121 WLAKLLNLPDDFLSAGNGGGVIQGTASEAVLVVLLAARDRVLRTVGKTALEKLVVYGSDQ 180

Query: 205 THSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCXXXXX 264
           THSA QKA +I GI P+N + +K   ST +ALSPDLL  ++  DI  GLIP FLC     
Sbjct: 181 THSALQKACQIGGIHPENCKLLKADSSTGYALSPDLLSEAVSHDITNGLIPFFLCANVGT 240

Query: 265 XXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFSLNAHKWL 324
                 DP+  L  V K   IW HVDAAYAG+AC+CPE++H++DG+EEA+SF++NAHKW 
Sbjct: 241 TSSTAVDPLLELGKVTKSNGIWFHVDAAYAGSACVCPEYRHYIDGVEEADSFNMNAHKWF 300

Query: 325 FTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKLWLV 384
            TN DC  LWVKD   L Q+LSTNP FL+NKASD+  VVDYKDWQ+ L RRFRS+KLW+V
Sbjct: 301 LTNFDCSVLWVKDRNALVQALSTNPVFLKNKASDANMVVDYKDWQVPLGRRFRSLKLWMV 360

Query: 385 LRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAIEIGKNGV 444
           LR YGV NL++++R HI++AK FE LV +D RFEIV PR FA+VCFR             
Sbjct: 361 LRLYGVENLQRYIRNHIKLAKQFEELVAQDPRFEIVAPRKFALVCFR------------- 407

Query: 445 QILPNH--ETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVIMAW 502
            +LP H  E  +N+LN  LL+++N++G +Y+SH  + G Y +R AVGA LTE+RHV  AW
Sbjct: 408 -LLPPHRNEDFSNKLNHNLLDTVNSTGKVYISHTALSGKYTLRLAVGAPLTEERHVNAAW 466

Query: 503 KVIKEHANAIL 513
           KVI+E A+ +L
Sbjct: 467 KVIQEKASVLL 477


>GSVIVT01021573001 assembled CDS
          Length = 397

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/494 (54%), Positives = 316/494 (63%), Gaps = 102/494 (20%)

Query: 22  MNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETIL 81
           M PLN  EFRRQ HMI+D +ADYY++IEKYPV SQVEPGYLR  +P  AP +PE IETIL
Sbjct: 1   MTPLNHQEFRRQGHMIIDMLADYYRDIEKYPVRSQVEPGYLRQLIPEDAPDYPEPIETIL 60

Query: 82  QDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESI 141
           QDV + IVPG+THWQSPNYFAYFPSSGSIA                              
Sbjct: 61  QDVQRDIVPGLTHWQSPNYFAYFPSSGSIAG----------------------------- 91

Query: 142 VMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVYG 201
                  ML LP  FLFSGNGGGVIHGTTCEAILCTL+AARDQ L R+G+ NI +LVVY 
Sbjct: 92  -------MLRLPESFLFSGNGGGVIHGTTCEAILCTLVAARDQMLDRVGRDNILRLVVYA 144

Query: 202 SDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCXX 261
           SDQTH A QKAA++AGI P N R ++TTK  AFALSP  LR +I SD E G+IPLFLC  
Sbjct: 145 SDQTHCALQKAAQVAGIHPDNVRVLQTTKLAAFALSPHSLRSAIISDKEAGMIPLFLCAT 204

Query: 262 XXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFSLNAH 321
                    DP+  LC                        +F+HF++             
Sbjct: 205 VGTTSSTAVDPVEALC------------------------DFRHFIN------------- 227

Query: 322 KWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKL 381
                                 +LSTNPE+LRN A++S +VVDYKDWQIALSRRFR+MKL
Sbjct: 228 ----------------------ALSTNPEYLRNGATNSKRVVDYKDWQIALSRRFRAMKL 265

Query: 382 WLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAI--EI 439
           WLVLRSYGVSNLR F+R+HIEMAK FE L+  DKRFE+VVPRNF+ VCFR+   AI    
Sbjct: 266 WLVLRSYGVSNLRSFIRRHIEMAKHFEQLIATDKRFEVVVPRNFSTVCFRVSPSAIPKRF 325

Query: 440 GKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVI 499
            +N      N   + N LN KLLES+N SG ++M+HA+V GVY IRFAVGA+LTE+RHV 
Sbjct: 326 YQNS-----NDNEIVNALNSKLLESLNGSGRVFMTHAIVGGVYIIRFAVGASLTEERHVN 380

Query: 500 MAWKVIKEHANAIL 513
           MAW+VI+++A+AIL
Sbjct: 381 MAWEVIQQYADAIL 394


>GSVIVT01021569001 assembled CDS
          Length = 566

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/493 (52%), Positives = 317/493 (64%), Gaps = 100/493 (20%)

Query: 12  GKSSNNKQEAMNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAP 71
            +S   +   MNPL+ +EFRRQ HMI+DFIA+YY++IEKYPV SQVEPGYL   +P +AP
Sbjct: 4   AQSDQERHCMMNPLDHEEFRRQGHMIIDFIANYYRDIEKYPVRSQVEPGYLHKRIPENAP 63

Query: 72  SHPESIETILQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMS 131
            +PE IETILQDV  HIVPG+THW SP +FAY+P++ SIA+                   
Sbjct: 64  YNPEPIETILQDVQNHIVPGLTHWLSPYHFAYYPANASIAA------------------- 104

Query: 132 SPAATELESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGK 191
                 LES               FLFSGNGGGVI GTT +A+LCT+IAARDQ L RIG+
Sbjct: 105 -----SLES---------------FLFSGNGGGVIQGTTGDAVLCTVIAARDQLLNRIGR 144

Query: 192 SNITKLVVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEK 251
            NI KLVVYGSDQTH +  KAAKIAGI P N R++KTTKS AFALSPD LR +I SD E 
Sbjct: 145 ENIVKLVVYGSDQTHCSLHKAAKIAGIHPNNVRSVKTTKSKAFALSPDSLRAAIISDKEA 204

Query: 252 GLIPLFLCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLE 311
           GLIPL+LC           DP+ PLC+VA++Y IWVH+DAAYAG+ACICP+         
Sbjct: 205 GLIPLYLCATVGTTSSGAVDPVGPLCDVAEDYGIWVHIDAAYAGSACICPD--------- 255

Query: 312 EANSFSLNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIA 371
                                        L  + ST+ E+L+N A+DS QVVDYKDWQ+ 
Sbjct: 256 ----------------------------ALVNAFSTDSEYLKNTATDSKQVVDYKDWQVP 287

Query: 372 LSRRFRSMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFR 431
           L+RRFR++KLWLVLRSYGV NLR +LR+H+EMAK FEGL+  DKRFE+VVPRNF++    
Sbjct: 288 LTRRFRAIKLWLVLRSYGVVNLRNYLRRHVEMAKHFEGLIAMDKRFEVVVPRNFSL---- 343

Query: 432 ILAEAIEIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGAT 491
                               + ANELNRKLL+S+N SG + M+HA+V G+Y IRF++G  
Sbjct: 344 --------------------STANELNRKLLKSLNDSGLVCMTHAIVGGIYMIRFSIGQP 383

Query: 492 LTEDRHVIMAWKV 504
           LT+ RH+ MAWKV
Sbjct: 384 LTDYRHIEMAWKV 396


>GSVIVT01026388001 assembled CDS
          Length = 448

 Score =  447 bits (1149), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/496 (45%), Positives = 296/496 (59%), Gaps = 100/496 (20%)

Query: 21  AMNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETI 80
             +PL+   F  ++ M+VDFIADYY+N+EKYPV SQV+PGYL +  P++AP  PE +ETI
Sbjct: 8   TFSPLDPQSFSEESKMVVDFIADYYKNVEKYPVQSQVDPGYLIHHCPDTAPYCPEPLETI 67

Query: 81  LQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELES 140
           L+DV   I+PG+THWQSPN+F YF ++ S A FLGEML TG NVVGFNW++SPAATELES
Sbjct: 68  LKDVSDSIIPGLTHWQSPNFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASPAATELES 127

Query: 141 IVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVY 200
           I                               AI+C+L AARD+ L +IG   ITKLVVY
Sbjct: 128 I-------------------------------AIICSLAAARDKVLKKIGHHKITKLVVY 156

Query: 201 GSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCX 260
           GSDQTHS  QKA+K+ GI   NFR++ T+ S  FAL PD +R ++  DI  GL+PLFLC 
Sbjct: 157 GSDQTHSTLQKASKLVGIPTSNFRSLPTSFSNDFALCPDDVRTAMEEDIAAGLVPLFLCA 216

Query: 261 XXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFSLNA 320
                     DP+  L +VAK++ +                   H L+G+E A+S ++N 
Sbjct: 217 TVGTTSSGAVDPLEALGHVAKDFKV-------------------HHLNGVELAHSITMNT 257

Query: 321 HKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMK 380
           HKWL TN+DCCCLW+K+P+    SLST PEFLRN AS+S +V+DYKDWQIALSRRFR++K
Sbjct: 258 HKWLLTNMDCCCLWIKEPKLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALSRRFRAIK 317

Query: 381 LWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAIEIG 440
           +W                                    +VVPR FA+VCFR         
Sbjct: 318 VW------------------------------------VVVPRRFALVCFR--------- 332

Query: 441 KNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVIM 500
                + P  E    ELN +LL ++N SG  +M+HA+V G+Y IR A+G+TLTE RHV  
Sbjct: 333 -----LRPREEGEGTELNSRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTEIRHVDS 387

Query: 501 AWKVIKEHANAILGIP 516
            WK+I+E A  +L  P
Sbjct: 388 LWKLIQEKAQLVLQEP 403


>GSVIVT01026384001 assembled CDS
          Length = 467

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/495 (46%), Positives = 296/495 (59%), Gaps = 100/495 (20%)

Query: 22  MNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETIL 81
            +PL+   F  ++ M+VDFIADYY+N+EKYPV SQV+PGYL +  P++AP  PE +ETIL
Sbjct: 9   FSPLDPQSFSEESKMVVDFIADYYKNVEKYPVQSQVDPGYLMHHCPDTAPYCPEPLETIL 68

Query: 82  QDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESI 141
           +DV   I+PG+THWQSPN+F YF ++ S A FLGEML TG NVVGFNW++SPAATELESI
Sbjct: 69  KDVSDGIIPGLTHWQSPNFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASPAATELESI 128

Query: 142 VMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVYG 201
                                          AI+C+L AARD+ L ++G   ITKLVVYG
Sbjct: 129 -------------------------------AIICSLAAARDKVLKKLGHHKITKLVVYG 157

Query: 202 SDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCXX 261
           SDQTHS  QKA+K+ GI   NFR++ T+ S  FAL PD +R ++  DI  GL+PLFLC  
Sbjct: 158 SDQTHSTLQKASKLVGIPASNFRSLPTSFSNYFALCPDDVRTAMEEDIGAGLVPLFLCAT 217

Query: 262 XXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFSLNAH 321
                    DP+  L +VAK++ +                   H L+G+E A+S S+N H
Sbjct: 218 VGTTSSGAVDPLEALGHVAKDFKV-------------------HHLNGVELAHSISMNPH 258

Query: 322 KWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKL 381
           KWL TN+DCCCLW+K+P+    SLST PEFLRN AS+S +V+DYKDWQIALSRRFR++K+
Sbjct: 259 KWLLTNMDCCCLWIKEPKLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALSRRFRAIKV 318

Query: 382 WLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAIEIGK 441
           W                                     VVPR FA+VCFR          
Sbjct: 319 W------------------------------------AVVPRRFALVCFR---------- 332

Query: 442 NGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVIMA 501
               + P  E  + ELN +LL ++N SG  +M+HA+V G+Y IR A+G+TLTE RHV   
Sbjct: 333 ----LRPREEGESTELNSRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTETRHVDSL 388

Query: 502 WKVIKEHANAILGIP 516
           WK+I+E A  +L  P
Sbjct: 389 WKLIQEKAQLVLQEP 403


>GSVIVT01000454001 assembled CDS
          Length = 210

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 138/194 (71%), Gaps = 19/194 (9%)

Query: 322 KWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKL 381
           +WL + LDCCCLW+K    +T+SLS NPE+L NKA++S  VV++KDWQI + RRF++++L
Sbjct: 25  EWLLSYLDCCCLWIKQLSKITRSLSINPEYLNNKANESDFVVEFKDWQIGIGRRFKALRL 84

Query: 382 WLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRI---LAEAIE 438
           WLV+RSYGV+NL+  +R  I+MAKLF+ +V  D RFEIV PR F++VCFR+      A  
Sbjct: 85  WLVIRSYGVANLQSHIRFDIQMAKLFKSMVRSDPRFEIVTPRLFSLVCFRLNPWPRSATG 144

Query: 439 IGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHV 498
           IG                LNR LL+ IN +G +YM+H +V+GVY +R AVG+TLTE+ HV
Sbjct: 145 IG----------------LNRMLLDQINTTGSVYMNHTIVDGVYMLRCAVGSTLTEELHV 188

Query: 499 IMAWKVIKEHANAI 512
           + AWK+IKE A+A+
Sbjct: 189 VAAWKLIKEEADAL 202


>GSVIVT01026378001 assembled CDS
          Length = 164

 Score =  169 bits (427), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 98/127 (77%)

Query: 22  MNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETIL 81
            +PL+   F  ++ +IVDFIADYY+N+EKYPV SQV  GYL +  P+SAP  PE +E+IL
Sbjct: 9   FSPLDPQSFLEESKLIVDFIADYYRNVEKYPVQSQVSSGYLVHHCPDSAPYSPEPLESIL 68

Query: 82  QDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESI 141
           ++V   I+PG+TH QSPN+F YF ++ S   FLGEML TG N +GFNW++SPAATELESI
Sbjct: 69  KEVSDSIIPGLTHLQSPNFFGYFQANASTTGFLGEMLCTGLNAIGFNWIASPAATELESI 128

Query: 142 VMDWLGQ 148
           VMDW+G+
Sbjct: 129 VMDWVGK 135