Jatropha Genome Database

JcCB0453991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453991.10 - phase: 0 
         (133 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009746001 assembled CDS                                       159   3e-40
GSVIVT01018923001 assembled CDS                                       134   1e-32
GSVIVT01037212001 assembled CDS                                       113   2e-26
GSVIVT01037215001 assembled CDS                                       110   2e-25
GSVIVT01037216001 assembled CDS                                       109   4e-25
GSVIVT01037214001 assembled CDS                                       108   6e-25
GSVIVT01037213001 assembled CDS                                       108   7e-25
GSVIVT01037211001 assembled CDS                                       107   2e-24
GSVIVT01030163001 assembled CDS                                       105   6e-24
GSVIVT01030165001 assembled CDS                                       103   3e-23
GSVIVT01020553001 assembled CDS                                        82   6e-17
GSVIVT01003344001 assembled CDS                                        69   9e-13
GSVIVT01003349001 assembled CDS                                        68   1e-12

>GSVIVT01009746001 assembled CDS
          Length = 433

 Score =  159 bits (402), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 87/108 (80%)

Query: 1   MKSWCLILFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFAND 60
           MKSW L L V++ + KQG+F+QV+A DGFV T G+ F+LNG P++ANGFNAYWLMY A+D
Sbjct: 1   MKSWALALLVLVFIQKQGNFLQVEAADGFVKTSGMHFVLNGLPYHANGFNAYWLMYVASD 60

Query: 61  PSTRNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           PS R+K+SS F EA  HGL +ARTWAF+DG  R LQYSPGSYNEQ FQ
Sbjct: 61  PSQRSKISSAFAEAAGHGLTIARTWAFSDGGYRPLQYSPGSYNEQMFQ 108


>GSVIVT01018923001 assembled CDS
          Length = 433

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 74/88 (84%)

Query: 21  VQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLA 80
           VQV+A DGF+ T+GV F++NGSP+YANGFNAYWLMY A+DPS R KVS+ F+EA +HGL 
Sbjct: 21  VQVEAGDGFIRTRGVHFVMNGSPYYANGFNAYWLMYLASDPSQRAKVSAAFREASSHGLT 80

Query: 81  LARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           +ARTWAF+DG  R LQYSPG YN+Q F+
Sbjct: 81  VARTWAFSDGGYRPLQYSPGFYNQQMFK 108


>GSVIVT01037212001 assembled CDS
          Length = 402

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 5/105 (4%)

Query: 4   WCLILFVVLMVHKQGSFVQVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPST 63
           W L L   L         +V    GFV T+  QF+LNGSPF+ NGFN+YWLM+ + +PS 
Sbjct: 11  WGLFLLAALACE-----ARVLQNSGFVQTRNTQFILNGSPFFFNGFNSYWLMHISAEPSQ 65

Query: 64  RNKVSSVFQEAKAHGLALARTWAFNDGQDRALQYSPGSYNEQAFQ 108
           RNKVS VF++A A GL++ RTWAF+DG  +ALQ SPG Y+E+ FQ
Sbjct: 66  RNKVSDVFRQASAAGLSVCRTWAFSDGGYQALQISPGVYDERVFQ 110


>GSVIVT01037215001 assembled CDS
          Length = 403

 Score =  110 bits (274), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 62/81 (76%)

Query: 28  GFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAF 87
           GFV T+  QF+LNGSPF+ NGFN+YW+M  A DPS R+KVS VF +A A  L++ RTWAF
Sbjct: 31  GFVQTRNTQFILNGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQATAARLSVCRTWAF 90

Query: 88  NDGQDRALQYSPGSYNEQAFQ 108
           NDG  +ALQ SPG Y+E+ FQ
Sbjct: 91  NDGGSQALQISPGVYDERVFQ 111


>GSVIVT01037216001 assembled CDS
          Length = 449

 Score =  109 bits (272), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 62/81 (76%)

Query: 28  GFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAF 87
           GFV T+  QF+LNGSPF+ NGFN+YW+M  A DPS R+KVS VF +A A  L++ RTWAF
Sbjct: 94  GFVQTRNTQFILNGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQAAAARLSVCRTWAF 153

Query: 88  NDGQDRALQYSPGSYNEQAFQ 108
           NDG  +ALQ SPG Y+E+ FQ
Sbjct: 154 NDGGTQALQISPGVYDERVFQ 174


>GSVIVT01037214001 assembled CDS
          Length = 403

 Score =  108 bits (271), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 63/81 (77%)

Query: 28  GFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAF 87
           GFV T+  QF+L+GSPF+ NGFN+YW+M  A DPS RNK+S VF +A A  L++ RTWAF
Sbjct: 31  GFVQTQNTQFVLDGSPFFFNGFNSYWMMNVAADPSQRNKISEVFGQATASRLSVCRTWAF 90

Query: 88  NDGQDRALQYSPGSYNEQAFQ 108
           NDG ++ALQ SPG Y+E+ FQ
Sbjct: 91  NDGGNQALQISPGVYDERVFQ 111


>GSVIVT01037213001 assembled CDS
          Length = 339

 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 61/81 (75%)

Query: 28  GFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAF 87
           GFV T+  QF LNGSPF+ NGFN+YW+M  A DPS R+KVS VF +A A  L++ RTWAF
Sbjct: 31  GFVQTRNTQFTLNGSPFFFNGFNSYWMMNVAADPSQRSKVSDVFSQAAAVRLSVCRTWAF 90

Query: 88  NDGQDRALQYSPGSYNEQAFQ 108
           NDG  +ALQ SPG Y+E+ FQ
Sbjct: 91  NDGGTQALQISPGVYDERVFQ 111


>GSVIVT01037211001 assembled CDS
          Length = 456

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 65/87 (74%)

Query: 22  QVKAEDGFVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLAL 81
           +V +  GFV T+G +F+L GS    NGFN+YW+M+ A +PS R KVS+ F+EA   GL++
Sbjct: 24  RVHSHGGFVRTEGTRFVLGGSSSLFNGFNSYWMMHVATEPSERYKVSNTFREAADAGLSV 83

Query: 82  ARTWAFNDGQDRALQYSPGSYNEQAFQ 108
            RTWAF+DG DRALQ SPG+Y+E+ FQ
Sbjct: 84  CRTWAFSDGGDRALQISPGTYDERVFQ 110


>GSVIVT01030163001 assembled CDS
          Length = 471

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 58/79 (73%)

Query: 30  VTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAFND 89
           V  KG QF++N  PFY NGFN YWLM FA D STR KVS VFQ+A + GL + RTWAFND
Sbjct: 73  VQKKGNQFVVNDKPFYVNGFNTYWLMVFAVDQSTRGKVSEVFQQAASVGLTVCRTWAFND 132

Query: 90  GQDRALQYSPGSYNEQAFQ 108
           GQ RALQ SP  Y+E+ F+
Sbjct: 133 GQWRALQKSPSVYDEEVFK 151


>GSVIVT01030165001 assembled CDS
          Length = 386

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 58/79 (73%)

Query: 30  VTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAFND 89
           V  KG QF++NG PFY NGFN YWLM FA D STR KVS VFQ+A + GL + RT AFND
Sbjct: 12  VQKKGNQFVVNGKPFYVNGFNTYWLMVFAVDQSTRGKVSEVFQQAASVGLTVCRTLAFND 71

Query: 90  GQDRALQYSPGSYNEQAFQ 108
           GQ RALQ SP  Y+E+ F+
Sbjct: 72  GQWRALQKSPSVYDEEVFK 90


>GSVIVT01020553001 assembled CDS
          Length = 432

 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 52/80 (65%)

Query: 29  FVTTKGVQFMLNGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLALARTWAFN 88
           FV   G QFM++G  FY NG+N+YWLM  A D  ++ +V ++ Q     GL + RTWAFN
Sbjct: 40  FVGRNGTQFMVDGKVFYINGWNSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFN 99

Query: 89  DGQDRALQYSPGSYNEQAFQ 108
           DG   ALQ SPG ++E+ F+
Sbjct: 100 DGAYHALQISPGRFDERVFK 119


>GSVIVT01003344001 assembled CDS
          Length = 449

 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 7/88 (7%)

Query: 28  GFVTTKGVQFML------NGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLAL 81
           GFV T   +F++      + S  Y NG+N+YWLM  +    +R++VS++ +     G+++
Sbjct: 42  GFVGTNSTKFVIVEPDGSHQSTLYINGWNSYWLMEESVWAPSRSRVSNMLRRGAEMGMSV 101

Query: 82  ARTWAFNDGQ-DRALQYSPGSYNEQAFQ 108
            RTWAFNDG    +LQ SPG +NE+ FQ
Sbjct: 102 CRTWAFNDGDGPNSLQISPGVFNERVFQ 129


>GSVIVT01003349001 assembled CDS
          Length = 451

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 7/88 (7%)

Query: 28  GFVTTKGVQFML------NGSPFYANGFNAYWLMYFANDPSTRNKVSSVFQEAKAHGLAL 81
           GFV T   +F++      + S  Y NG+N+YWLM  +    +R++VS++ +     G+++
Sbjct: 42  GFVGTNSTKFVIVEPDGSHQSTLYINGWNSYWLMEESVWGPSRSRVSNMLRRGAEMGMSV 101

Query: 82  ARTWAFNDGQ-DRALQYSPGSYNEQAFQ 108
            RTWAFNDG    +LQ SPG +NE+ FQ
Sbjct: 102 CRTWAFNDGDGPNSLQISPGVFNERVFQ 129