Jatropha Genome Database

JcCB0446691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0446691.10 - phase: 0 
         (242 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01031980001 assembled CDS                                       266   7e-72
GSVIVT01018950001 assembled CDS                                       257   4e-69
GSVIVT01016751001 assembled CDS                                       141   3e-34
GSVIVT01038796001 assembled CDS                                       137   3e-33
GSVIVT01009036001 assembled CDS                                       132   2e-31
GSVIVT01002654001 assembled CDS                                       129   9e-31
GSVIVT01035484001 assembled CDS                                       128   3e-30
GSVIVT01006039001 assembled CDS                                       127   7e-30

>GSVIVT01031980001 assembled CDS
          Length = 304

 Score =  266 bits (680), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 129/240 (53%), Positives = 169/240 (70%), Gaps = 5/240 (2%)

Query: 1   MVNTLVTIYLPILHVLVKLVGMRPHEVEIEPGTVIHFWVPRTHK---PNKPALVFLHGFG 57
           MVN +VT+   ++ +L+K  G+ P +VEIEPGTV++FW P   K     KP +V +HGFG
Sbjct: 1   MVN-IVTLQKSLVQILMKFNGVEPKKVEIEPGTVMNFWAPAKQKNEETQKPNVVLVHGFG 59

Query: 58  LNGLVTWQFQVLSLARNYAVYVPDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCS 117
           ++G++TW FQVL+L  +Y+VYVPD LFFG S T   +RSP FQAEC+A GLRK+GVE+C 
Sbjct: 60  VDGILTWMFQVLALKSHYSVYVPDLLFFGDSATAAGNRSPRFQAECLATGLRKLGVERCV 119

Query: 118 LVGLSYGGMIGFKMAEMYPDLXXXXXXXXXXXALTESISGDSLDRIGFSSWILYLLPRTV 177
           +VGLSYGGMIGFKMAE+YPDL           ALTES+S   L R+GF  W   L+P TV
Sbjct: 120 VVGLSYGGMIGFKMAELYPDLVESMVVSGSVEALTESLSNRRLKRLGFRRWSECLMPTTV 179

Query: 178 NGFKQMLNIATYKL-PWLPNFAYKHFFEVMFNHRKERTELLEALITRDKEFRIPSYSQVV 236
            G K+M  + T+ L PW+PN+ +K + EVMF+HRKER ELLEAL+ RD++F    Y Q +
Sbjct: 180 EGVKEMFRVGTHWLPPWIPNWIFKDYLEVMFSHRKEREELLEALVIRDEDFTPYHYHQRI 239


>GSVIVT01018950001 assembled CDS
          Length = 284

 Score =  257 bits (656), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 117/222 (52%), Positives = 159/222 (71%), Gaps = 1/222 (0%)

Query: 17  VKLVGMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYA 76
           +K+ G+RPH VEIEPGTV++FWVP   KP KP +V +HGF   G+VTWQFQV +L + Y+
Sbjct: 1   MKMAGVRPHMVEIEPGTVMNFWVP-LRKPTKPVVVLVHGFAAEGIVTWQFQVGALTKKYS 59

Query: 77  VYVPDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYP 136
           VYVPD LFFG S T+K DRSP FQAEC+ KGLRK+GVEKC++VG SYGGM+ FKMAE++ 
Sbjct: 60  VYVPDLLFFGDSTTDKSDRSPTFQAECLEKGLRKLGVEKCTIVGFSYGGMVAFKMAELHQ 119

Query: 137 DLXXXXXXXXXXXALTESISGDSLDRIGFSSWILYLLPRTVNGFKQMLNIATYKLPWLPN 196
           DL           A+T+SIS  +L R+GF+S    LLP +V G K +L++A +K  W P+
Sbjct: 120 DLVQAVVVSGSILAMTDSISEATLQRLGFASSSELLLPTSVKGLKALLSVAAHKKLWFPD 179

Query: 197 FAYKHFFEVMFNHRKERTELLEALITRDKEFRIPSYSQVVNF 238
             +K + EVMF +R+ER +LLEAL+   K+  +P++ Q ++ 
Sbjct: 180 RLHKDYLEVMFTNRQERGDLLEALVVSTKDTNVPNFPQKIHL 221


>GSVIVT01016751001 assembled CDS
          Length = 337

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 8/212 (3%)

Query: 2   VNTLVTIYLPILHVLVKLVGMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGL 61
            + +VT+    L +    +G+ P  VE++  T +HFW     + ++P LV +HGFG N  
Sbjct: 34  CSIIVTLIESCLSLYFIFLGLSPTTVELDDHTTVHFWTSAHRRFSRPNLVLVHGFGGNS- 92

Query: 62  VTWQFQVL--SLARNYAVYVPDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLV 119
             WQF  L   L+R++ +YVPD LFFG S T + +RS  FQA C+ +GLR +GV +C + 
Sbjct: 93  -RWQFLQLVGPLSRSFNLYVPDLLFFGKSHTFRRNRSEGFQARCVVEGLRGLGVGRCRVF 151

Query: 120 GLSYGGMIGFKMAEMYPDLXXXXXXXXXXXALTESISGDSLDRIGFSSWILYLLPRTVNG 179
           G+SYGG + ++MAEM+P++             TE    + L ++G S   ++ LP +   
Sbjct: 152 GISYGGYVAYRMAEMWPEVVERVAIASCGIGYTEEQKREHLGKLGRSVTEIF-LPESPKN 210

Query: 180 FKQMLNIATYK---LPWLPNFAYKHFFEVMFN 208
            +++LN++ YK   L W P+F  +H  + M  
Sbjct: 211 LRRLLNLSIYKFDPLKWAPDFFLQHLIDAMLK 242


>GSVIVT01038796001 assembled CDS
          Length = 311

 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 3/218 (1%)

Query: 20  VGMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYAVYV 79
            G+R    ++  GTV+H WVP+ H+  KP LV +HGFG N +  + + +    + + +YV
Sbjct: 22  AGLRSVLTDLGEGTVMHCWVPKCHRQTKPNLVLVHGFGANAMWQYGYLLRHFIQRFNIYV 81

Query: 80  PDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYPDLX 139
           PD LFFG S T +P+R+  FQAEC+ K +   GV K +LVG+SYGG +G+ MA  +P+  
Sbjct: 82  PDLLFFGRSFTTRPERTEAFQAECVMKMMETHGVRKMNLVGVSYGGFVGYNMAVQFPEAM 141

Query: 140 XXXXXXXXXXALTESISGDSLDRIG-FSSWILYLLPRTVNGFKQMLNIATYK-LPWLPNF 197
                      L E     SL  +         L+P+T    ++++ ++  K +  +PN+
Sbjct: 142 ERLVLCCTGVCLEEKDMEQSLFAVSDLEEAASTLMPQTPEKLRELMKLSFVKPVKGVPNY 201

Query: 198 AYKHFFEVMF-NHRKERTELLEALITRDKEFRIPSYSQ 234
               F +VM  +H +E+ ELL+ ++   K   +P  +Q
Sbjct: 202 FLTDFIDVMCTDHVEEKRELLQMILKDRKLINLPKITQ 239


>GSVIVT01009036001 assembled CDS
          Length = 342

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 113/217 (52%), Gaps = 3/217 (1%)

Query: 21  GMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYAVYVP 80
           G+R    ++  GTVIH WVP+T K +KP L+ +HGFG N L  W   +  L   + VYVP
Sbjct: 66  GLRSTITDLGDGTVIHCWVPKTRKESKPNLLLIHGFGANALWQWGDLIPYLVPYFNVYVP 125

Query: 81  DFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYPDLXX 140
           D LFFG S T +P+R+  FQA+C+ + +    V+K SL+GLSYGG +G+ MA  + +   
Sbjct: 126 DLLFFGDSYTTRPERTESFQAQCVMRVMEAKSVKKMSLIGLSYGGFVGYSMAAQFKEAIE 185

Query: 141 XXXXXXXXXALTESISGDSLDRIG-FSSWILYLLPRTVNGFKQMLNIATYKLP-WLPNFA 198
                     L E      L ++         LLP+T    +++L+   YK P  LP+  
Sbjct: 186 RVVICGAGVCLEEKDLEKGLFKVSHIEDAASILLPQTPEKLRELLSYTFYKPPRGLPSCL 245

Query: 199 YKHFFEVMFNH-RKERTELLEALITRDKEFRIPSYSQ 234
              F +VM     +ER +L+ A+    K   +P+  Q
Sbjct: 246 LNDFIQVMCTEFVEERKDLIRAIPKDRKLSELPTIPQ 282


>GSVIVT01002654001 assembled CDS
          Length = 298

 Score =  129 bits (325), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 3/218 (1%)

Query: 20  VGMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYAVYV 79
            G+R    ++  GTV+H W+P+  K NKP LV +HG G N +  W   +  L   + VYV
Sbjct: 22  AGLRSTTSDLGDGTVMHCWIPKARKENKPNLVLIHGMGANAMWQWADFIRPLIARFNVYV 81

Query: 80  PDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYPDLX 139
           PD +FFG S T +P+RS  FQA+C+ + +   GV + ++VG+SYGG + +++AE +P   
Sbjct: 82  PDLVFFGDSYTTRPERSESFQAQCVMRMIEGHGVSRMNVVGISYGGFVAYRIAEQFPAAV 141

Query: 140 XXXXXXXXXXALTE-SISGDSLDRIGFSSWILYLLPRTVNGFKQMLNIATYK-LPWLPNF 197
                      L E  +                LLP+T    ++++ I+  K +  +P+ 
Sbjct: 142 ERSVLCCAGVCLEEKDMEAGMFQVSSVEDAASILLPQTPEKVRELMRISFAKPINTMPSC 201

Query: 198 AYKHFFEVMFN-HRKERTELLEALITRDKEFRIPSYSQ 234
               F +VM   H +ER EL+ AL    K   +P  +Q
Sbjct: 202 FLNDFIDVMCTEHLQERRELIRALHKDRKLSNLPKITQ 239


>GSVIVT01035484001 assembled CDS
          Length = 298

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 3/202 (1%)

Query: 21  GMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYAVYVP 80
           G+    ++I+  T IHFW P T   +KP L+ +HGFG   L  W+ QV     ++ VYVP
Sbjct: 24  GLSSQTIDIDHQTSIHFWGPNT-ASHKPVLLLIHGFGPVCLWQWRRQVQYFCADFDVYVP 82

Query: 81  DFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYPDLXX 140
           D +FFG S T   DR+  FQA  + K L K+G+E+ +++G SYGG + + MA M+P+   
Sbjct: 83  DLIFFGDSTTTSSDRTEVFQAVSIGKLLEKVGIERYAVMGTSYGGFVAYHMAYMWPERVE 142

Query: 141 XXXXXXXXXALTESISGDSLDRIGFSSWILYLLPRTVNGFKQMLNIATYK-LPWLPNFAY 199
                     L    + + L R         +LPRT    + + ++A +K LP +PNF +
Sbjct: 143 KVVIASSAVNLIRRDNEELLQRAKLKEIEDLMLPRTAEQLRTLTSLAVFKRLPTIPNFLW 202

Query: 200 KHFFEVMF-NHRKERTELLEAL 220
               + ++ ++R+E+  LL+ L
Sbjct: 203 NDIIDKLYSDNREEKKGLLKGL 224


>GSVIVT01006039001 assembled CDS
          Length = 279

 Score =  127 bits (318), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 20  VGMRPHEVEIEPGTVIHFWVPRTHKPNKPALVFLHGFGLNGLVTWQFQVLSLARNYAVYV 79
            G+R    ++  GTV+H W+P++ K NKP L+ +HG G N +  W   +  L   + VYV
Sbjct: 39  AGLRSTTSDLGDGTVMHCWIPKSRKENKPNLLLIHGMGANAMWQWADFIRPLIARFNVYV 98

Query: 80  PDFLFFGSSITNKPDRSPEFQAECMAKGLRKIGVEKCSLVGLSYGGMIGFKMAEMYPDLX 139
           PD +FFG S T +P+RS  FQA+C+ + +   GV + ++VG+SYGG + +++AE +P   
Sbjct: 99  PDLVFFGDSYTTRPERSESFQAQCVMRMMEGHGVSRMNVVGISYGGFVAYRIAEQFPAAV 158

Query: 140 XXXXXXXXXXALTE-SISGDSLDRIGFSSWILYLLPRTVNGFKQMLNIATYK-LPWLPNF 197
                      + E  +                LLP+T    ++++ I+  K +  +P+ 
Sbjct: 159 ERLVLCCAGVCMEEKDMEAGMFQVSSVEDAASILLPQTPEKVRELVRISFAKPINTMPSC 218

Query: 198 AYKHFFEVMFN-HRKERTELLEALITRDKEFRIPSYSQ 234
               F +VM   H +ER EL+ AL    K   +P  +Q
Sbjct: 219 FLNDFIDVMCTEHLQERRELIMALHKDRKLSNLPKITQ 256