Jatropha Genome Database

JcCB0445261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0445261.10 + phase: 0 /partial
         (215 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01032502001 assembled CDS                                       265   1e-71
GSVIVT01007785001 assembled CDS                                       233   4e-62
GSVIVT01032309001 assembled CDS                                       225   1e-59
GSVIVT01033170001 assembled CDS                                       186   5e-48
GSVIVT01025208001 assembled CDS                                       184   3e-47
GSVIVT01025696001 assembled CDS                                       168   2e-42
GSVIVT01023608001 assembled CDS                                       166   6e-42
GSVIVT01028711001 assembled CDS                                       166   9e-42
GSVIVT01027087001 assembled CDS                                       155   2e-38
GSVIVT01015970001 assembled CDS                                       142   1e-34
GSVIVT01029407001 assembled CDS                                       130   6e-31
GSVIVT01029404001 assembled CDS                                       129   1e-30
GSVIVT01011487001 assembled CDS                                        97   4e-21

>GSVIVT01032502001 assembled CDS
          Length = 685

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 135/241 (56%), Positives = 169/241 (70%), Gaps = 35/241 (14%)

Query: 1   MNRLIQNPKSQFRHLRRLHQQLTSQSLSVTNSVSEVHPLLILWRYQILDPDSDIVTYWNY 60
           MN  I  P S+FR  RR          S     S+++P  ILWRYQIL+PD DIVTYWN+
Sbjct: 1   MNTAILTPASKFRPFRR--------RPSYAPITSDLNPYHILWRYQILEPDGDIVTYWNH 52

Query: 61  VFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFRT 120
           VFL+TS+I+LF+DPL+FFLP       CL++D  L I++T+FR++SDLF++LH++MKFRT
Sbjct: 53  VFLVTSLISLFLDPLYFFLPSVGGPA-CLTSDTSLGIVVTFFRTVSDLFYLLHMVMKFRT 111

Query: 121 AFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQT---------------- 164
           AFVAP+SR  GRGELVMDA  IAMRYLKSDF+IDLAA LPLPQ                 
Sbjct: 112 AFVAPSSRGLGRGELVMDAHTIAMRYLKSDFIIDLAATLPLPQARLWVRVQLTTLIFLKS 171

Query: 165 ----------VIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
                     VIW+VIPAT+  RAD  NNTL+L+VLIQY+PR+F+IFPL++RI+KTTG V
Sbjct: 172 FPEKEKGIDIVIWLVIPATKKDRADQTNNTLALIVLIQYVPRLFLIFPLNRRIIKTTGVV 231

Query: 215 A 215
           A
Sbjct: 232 A 232


>GSVIVT01007785001 assembled CDS
          Length = 637

 Score =  233 bits (594), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 142/174 (81%), Gaps = 3/174 (1%)

Query: 43  WRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDG-LCLSNDNHLAILITY 101
           W  QILDP   +VT WN++FLI+ ++ALF+DPL+F+LP    DG  C   D  L I++T+
Sbjct: 15  WWTQILDPGGRLVTQWNHIFLISCLLALFLDPLYFYLPV--IDGPACFRIDLGLGIVVTF 72

Query: 102 FRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPL 161
           FR+++D+F++ H+IMKFR AFVAP+SRVFGRGELVMD ++IA+RYLKSDF+ID AA LPL
Sbjct: 73  FRTVADMFYLTHMIMKFRMAFVAPSSRVFGRGELVMDPQQIALRYLKSDFIIDFAATLPL 132

Query: 162 PQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
           PQTVIW +IPA +D   DHAN+ LSL+VLIQYIPR+F+IFPL++RIVK TG VA
Sbjct: 133 PQTVIWYIIPAVKDPITDHANHILSLIVLIQYIPRLFLIFPLYRRIVKITGVVA 186


>GSVIVT01032309001 assembled CDS
          Length = 709

 Score =  225 bits (573), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 101/174 (58%), Positives = 138/174 (79%), Gaps = 2/174 (1%)

Query: 43  WRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPY--ANFDGLCLSNDNHLAILIT 100
           WR QILDP S++V  W+ VF+++ ++ALF+DPL+F+LP    N    C+  D +L I++T
Sbjct: 74  WRKQILDPGSELVLQWSRVFIVSCLVALFVDPLYFYLPAVGGNEGSWCIKTDLNLRIVVT 133

Query: 101 YFRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALP 160
            FR+I+D F++LH+I+KFRTA+VAP+SRVFGRGELVMD K+IA RY++SDF IDL A LP
Sbjct: 134 CFRTIADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKKIAQRYIRSDFFIDLVATLP 193

Query: 161 LPQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
           LPQ VIW +IPATR  + DH NN L+L+VL+QY+PR+++IFPL  +I+K TG V
Sbjct: 194 LPQIVIWFIIPATRSPQTDHNNNALALIVLLQYVPRLYLIFPLSSQIIKATGVV 247


>GSVIVT01033170001 assembled CDS
          Length = 664

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/172 (55%), Positives = 114/172 (66%), Gaps = 27/172 (15%)

Query: 43  WRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYF 102
           WR +ILDP SDI   WN VFL + ++ALF+DPLFF+LP    DG    N +         
Sbjct: 81  WRKRILDPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGDG----NSSC-------- 128

Query: 103 RSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLP 162
                          FRTA+V+P+SRVFGRGELVMD KEIA RYLKSDF IDL A LPLP
Sbjct: 129 ---------------FRTAYVSPSSRVFGRGELVMDPKEIARRYLKSDFFIDLVATLPLP 173

Query: 163 QTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
           Q VIW VIPA R S ADH NN L L+VL+QY+PR+++IFPL  +I+K TG V
Sbjct: 174 QIVIWFVIPAIRSSHADHTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVV 225


>GSVIVT01025208001 assembled CDS
          Length = 697

 Score =  184 bits (467), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 84/171 (49%), Positives = 123/171 (71%), Gaps = 1/171 (0%)

Query: 44  RYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFR 103
           + +ILDP    +  WN +FL+  +I+LF+DPLFF+LP    D +C+  +  L +++T  R
Sbjct: 77  KQKILDPRGKSIRRWNKIFLVACLISLFVDPLFFYLPDVR-DKVCMDIEIPLEVVLTIIR 135

Query: 104 SISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQ 163
           SI+D+F+++ I ++FRTA+VAP+SRVFGRGELV+D  +IA+RYL   F IDL AALPLPQ
Sbjct: 136 SIADIFYMIQIFVRFRTAYVAPSSRVFGRGELVIDTSKIALRYLGKGFWIDLIAALPLPQ 195

Query: 164 TVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
            +IW++IP  R S   +  N L  +++ QY+PR+++IFPL  +IVK TG V
Sbjct: 196 VLIWIIIPNLRGSTMTNTKNMLRFILICQYLPRLYLIFPLSCQIVKATGVV 246


>GSVIVT01025696001 assembled CDS
          Length = 678

 Score =  168 bits (425), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/171 (47%), Positives = 115/171 (67%), Gaps = 1/171 (0%)

Query: 44  RYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFR 103
           + +I DP   +   WN +FL++ +I+LF+DPLFF+LP     G+C+     L I +T  R
Sbjct: 74  KKKIFDPRGPVKNRWNKIFLVSCLISLFVDPLFFYLPGMK-KGMCMDISQSLEIALTVVR 132

Query: 104 SISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQ 163
           S  D F+++ I ++FRTA+VAP+SRVFGRGELV+D  +IA RYL  DF +DL AA+P PQ
Sbjct: 133 STVDTFYMIQIFVRFRTAYVAPSSRVFGRGELVIDPSKIASRYLHKDFWLDLVAAVPFPQ 192

Query: 164 TVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
            +IW VIP     R  +    L L+++ QY+ R+++IFPL  +IVKTTG V
Sbjct: 193 MLIWAVIPNLWTLRTINLRLVLHLIIIFQYLLRLYIIFPLSSQIVKTTGVV 243


>GSVIVT01023608001 assembled CDS
          Length = 743

 Score =  166 bits (421), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/170 (44%), Positives = 111/170 (65%)

Query: 46  QILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSI 105
           +I DP    +  WN +F+I+ I+A+ +DPLFF+LP  +    CL  D  LAI  T  R+I
Sbjct: 97  KIFDPQHKFLQLWNKLFVISCILAVSVDPLFFYLPVIDSSSKCLGIDRKLAITATTLRTI 156

Query: 106 SDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTV 165
            D F+++H+ ++FRTA++AP+SRVFGRGELV+D   IA RYL++ F+ID  A LPLPQ V
Sbjct: 157 IDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPARIAKRYLRTYFIIDFLAVLPLPQIV 216

Query: 166 IWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
           +W  + ++  S        L  +VL+QYIPR+F + PL   + +T+G  A
Sbjct: 217 VWRFLHSSDGSDVLSTKQALFFIVLLQYIPRLFRMLPLSSELKRTSGVFA 266


>GSVIVT01028711001 assembled CDS
          Length = 709

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 112/167 (67%)

Query: 46  QILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSI 105
           +ILDP    +  WN +F+++ IIA+ +DPLFF++P  +    CLS D  L I  +  RS 
Sbjct: 80  KILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYIPVIDKLKKCLSLDESLQITASVLRSF 139

Query: 106 SDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTV 165
           +D+F++LHII +FRT F+AP+SRVFGRG LV D+  IA RYL S F+ID+ A LPLPQ V
Sbjct: 140 TDIFYILHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIARRYLSSYFLIDILAVLPLPQVV 199

Query: 166 IWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTG 212
           IW++IP    S+  +    L  +V  QYIPR+  + PL++ + +T+G
Sbjct: 200 IWIIIPKLGGSKYMNTKRLLKFVVFFQYIPRVLRVRPLYKEVTRTSG 246


>GSVIVT01027087001 assembled CDS
          Length = 1373

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 119/194 (61%)

Query: 21  QLTSQSLSVTNSVSEVHPLLILWRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLP 80
           Q   +SLS+ +   +    L   R +ILDP    +  WN VFLI++++A+ +DP FF++P
Sbjct: 55  QSWRKSLSLPSRTRKPSKELKSPRKKILDPQGSFLQEWNKVFLISTVLAVALDPFFFYIP 114

Query: 81  YANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAK 140
             + +  CL  D  L ++    RSI D+F++LHII +F T F+AP+SRVFGRGELV    
Sbjct: 115 ILHREETCLDLDTKLGVIACVLRSIVDIFYILHIIFQFHTGFIAPSSRVFGRGELVEAPS 174

Query: 141 EIAMRYLKSDFVIDLAAALPLPQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVI 200
            IA RYL + F+ID+ + LPLPQ VI +V    +   + +  + L  ++  QY+PR+  I
Sbjct: 175 AIAKRYLSTYFIIDILSILPLPQLVILIVKAEVKGPVSLNTKDLLKSVIFSQYVPRLLRI 234

Query: 201 FPLHQRIVKTTGFV 214
           +PL++ +  T+G +
Sbjct: 235 YPLYKEVTTTSGII 248



 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 1/169 (0%)

Query: 44  RYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFR 103
           R  ILDP+   +  WN +FL++ ++A+ +D  FF+ P  N    CL  D+ L I+    R
Sbjct: 731 RKTILDPEGSFLQTWNKIFLVSCVLAISLDAFFFYAPVINRHSTCLDLDDRLQIVACVLR 790

Query: 104 SISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQ 163
           ++ D+F++LHII +FRT FVAP+SRVFG G L+ D+  IA RYL   FVID+ + LPLPQ
Sbjct: 791 TLIDVFYILHIIFQFRTGFVAPSSRVFGDGVLIDDSSVIAKRYLPY-FVIDILSILPLPQ 849

Query: 164 TVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTG 212
             +++V P  +   +    + L  ++L Q +PR+  I+PL++ +  T+G
Sbjct: 850 VAVFIVNPQLKSPVSFIRKDFLKFVILSQLVPRLVRIYPLYKEVTTTSG 898


>GSVIVT01015970001 assembled CDS
          Length = 719

 Score =  142 bits (358), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 10/205 (4%)

Query: 12  FRHL-RRLHQQLTSQSLSVTNSVSEVHPLLILWRYQILDPDSDIVTYWNYVFLITSIIAL 70
            RH+ R+L  ++T         VSE          +I DP    +  WN +F+I+ I+A+
Sbjct: 70  LRHIGRQLRSEITKAMFPEDLKVSE---------KKIFDPQDKSLLLWNRLFVISCILAV 120

Query: 71  FIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFRTAFVAPNSRVF 130
            +DPLFF+LP  +    CL  D +LA+  T  R+I D F+++ +  +FRTA++AP+SRVF
Sbjct: 121 SVDPLFFYLPIVDHQSSCLGIDPNLAVTTTTVRTIIDAFYLIRMAFQFRTAYIAPSSRVF 180

Query: 131 GRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVIWVVIPATRDSRADHANNTLSLMVL 190
           GRGELV+D  EIA RYL+  F ID  A  PLPQ ++W  +              L ++V 
Sbjct: 181 GRGELVIDPAEIAKRYLQRFFFIDFLAVFPLPQIIVWKFLRKGEGLEVLETKQQLLVVVF 240

Query: 191 IQYIPRMFVIFPLHQRIVKTTGFVA 215
           +QYIPR     PL   + +T G  A
Sbjct: 241 LQYIPRFVRFIPLTSELKRTAGVFA 265


>GSVIVT01029407001 assembled CDS
          Length = 775

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 1/157 (0%)

Query: 47  ILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSIS 106
           I++P + +V  WN  F+I+ ++A+F+DPLFF L     +  C+  D  L   I  FRS++
Sbjct: 194 IMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDLSLTKTIVAFRSMT 253

Query: 107 DLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVI 166
           D  ++L+++++FR A+VAP SRV G G+LV   K+IA+ YL   F+IDL   LPLPQ +I
Sbjct: 254 DFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYFLIDLFIVLPLPQIMI 313

Query: 167 WVVIPAT-RDSRADHANNTLSLMVLIQYIPRMFVIFP 202
            +V+P +   S A++A N L   VL+QYIPR++   P
Sbjct: 314 LLVLPMSLGSSGANYAKNLLRTAVLVQYIPRLYRFLP 350


>GSVIVT01029404001 assembled CDS
          Length = 777

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 102/157 (64%), Gaps = 1/157 (0%)

Query: 47  ILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSIS 106
           I++P + +V  WN  F+I+ ++A+F+DPLFF L     +  C+  D  L   I  FRS++
Sbjct: 194 IMNPHTKVVQRWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDMPLTKTIVVFRSMT 253

Query: 107 DLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVI 166
           D  ++L+++++FR A+VAP SRV G G+LV   K+IA+ YL   F+IDL   LPLPQ +I
Sbjct: 254 DFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMI 313

Query: 167 WVVIPAT-RDSRADHANNTLSLMVLIQYIPRMFVIFP 202
            +V+P +   S A++A N L   VL+QYIPR++   P
Sbjct: 314 LLVLPMSLGTSGANYAKNLLRTAVLVQYIPRLYRFLP 350


>GSVIVT01011487001 assembled CDS
          Length = 701

 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 3/128 (2%)

Query: 47  ILDPDSDIVTYWNYVFLITSIIALFIDPLFFF-LPYANFDGLCLSNDNHLAILITYFRSI 105
           +LDP +  V  WN  FL+   ++L +DPLFF+ +      G CL  D  LA ++T  R+ 
Sbjct: 98  VLDPRTKPVQRWNRAFLLVRGMSLAVDPLFFYVISIGGEGGPCLYMDGGLAAIVTVLRTC 157

Query: 106 SDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKS--DFVIDLAAALPLPQ 163
            D   + H+ ++FR A+V+  S V G G+LV DA+ IA  Y++S   F  DL   LP+PQ
Sbjct: 158 VDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDLFVILPVPQ 217

Query: 164 TVIWVVIP 171
            V W+V+P
Sbjct: 218 VVFWLVVP 225