Jatropha Genome Database
- JcCB0428641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0428641.10 - phase: 1 /partial
(269 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01038647001 assembled CDS 171 2e-43
GSVIVT01027443001 assembled CDS 123 9e-29
GSVIVT01025087001 assembled CDS 85 4e-17
GSVIVT01032644001 assembled CDS 84 7e-17
GSVIVT01007965001 assembled CDS 74 8e-14
GSVIVT01036037001 assembled CDS 58 6e-09
GSVIVT01012518001 assembled CDS 54 7e-08
GSVIVT01011897001 assembled CDS 54 9e-08
GSVIVT01036499001 assembled CDS 53 1e-07
GSVIVT01003983001 assembled CDS 53 2e-07
GSVIVT01010855001 assembled CDS 51 6e-07
GSVIVT01009198001 assembled CDS 50 8e-07
GSVIVT01010991001 assembled CDS 50 1e-06
GSVIVT01009197001 assembled CDS 50 1e-06
GSVIVT01000951001 assembled CDS 50 1e-06
GSVIVT01030127001 assembled CDS 50 2e-06
GSVIVT01033017001 assembled CDS 49 2e-06
GSVIVT01024661001 assembled CDS 49 2e-06
>GSVIVT01038647001 assembled CDS
Length = 747
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Query: 126 QTAKDSTSPSLQKQDHKLDSLEDRGHISAATDHSATSSFCNVSATHLN-MGYGSTSGSNS 184
Q A +STS + K +HKLDSLE +GH S ATD +++SSF N A++LN G GS GSN
Sbjct: 468 QNANNSTSQTNHKPEHKLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFGCGSICGSNG 527
Query: 185 NVDQAAIIRTTSERKNEGGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKK 244
N + A+++ +E KNE GI ++ +S R+IQREAALTKFRLKRKDRC+EKKVRYESRKK
Sbjct: 528 NANTVAVVQAAAEGKNEEGIFSHEGHSQRSIQREAALTKFRLKRKDRCFEKKVRYESRKK 587
Query: 245 LAEQRPRVKGQFVRQV 260
LAEQRPRVKGQFVRQV
Sbjct: 588 LAEQRPRVKGQFVRQV 603
>GSVIVT01027443001 assembled CDS
Length = 593
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 88/130 (67%), Gaps = 8/130 (6%)
Query: 140 DHKLDSLEDRGHISAATDHSATSSFCNVSATHLNMG-YGSTSGSNSN--VDQAAIIRTTS 196
++ L+ +E+ H S SA+SS CN +HL+ +G N A++RTT+
Sbjct: 456 ENNLEPMEELSHGSPVAGQSASSSLCNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTA 515
Query: 197 -ERKNEGGILHNDA----NSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPR 251
E N+ G+ +NDA +SH + QREAAL KFRLKRKDRC+EKKVRY+SRK+LAEQRPR
Sbjct: 516 PESVNDEGLSNNDALKGMDSHHSTQREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPR 575
Query: 252 VKGQFVRQVQ 261
VKGQFVRQVQ
Sbjct: 576 VKGQFVRQVQ 585
>GSVIVT01025087001 assembled CDS
Length = 103
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
N R QREAALTKFR KRK+RC+EKKVRY+SRKKLAEQRPR++GQFVRQ
Sbjct: 23 NRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQ 75
>GSVIVT01032644001 assembled CDS
Length = 769
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 43/45 (95%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
QREAAL KFR KRK+RC+EKKVRY+SRK+LAEQRPR++GQFVR+V
Sbjct: 714 QREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRV 758
>GSVIVT01007965001 assembled CDS
Length = 533
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 42/45 (93%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
+REAAL KFR KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR++
Sbjct: 443 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKM 487
>GSVIVT01036037001 assembled CDS
Length = 307
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPI 264
I REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ ++ +
Sbjct: 238 IDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEIEV 287
>GSVIVT01012518001 assembled CDS
Length = 254
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQF 256
QR A+L++FR KRK+RC++KK+RY RK++A + R KGQF
Sbjct: 94 QRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQF 134
>GSVIVT01011897001 assembled CDS
Length = 432
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 376 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASF 421
>GSVIVT01036499001 assembled CDS
Length = 438
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPI 264
+ REA + ++R K+K R +EK +RY SRK AE RPR+KG+F ++ + +
Sbjct: 367 MDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV 416
>GSVIVT01003983001 assembled CDS
Length = 318
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 36/44 (81%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
QR+A++ +++ KR+ R + K++RYE RK AE+RPR+KG+FV++
Sbjct: 274 QRQASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKR 317
>GSVIVT01010855001 assembled CDS
Length = 392
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 35/43 (81%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
REA++ +++ KR+ R + KK+RY+ RK A++RPR+KG+FVR+
Sbjct: 341 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 383
>GSVIVT01009198001 assembled CDS
Length = 324
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQF 256
+R A+L +FR KRK+RC++KK+RY RK++A++ R GQF
Sbjct: 90 RRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 130
>GSVIVT01010991001 assembled CDS
Length = 343
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
+R++A+++++ K+K R YEK +RYESRK AE R R+KG+F +
Sbjct: 298 ERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRFAKM 341
>GSVIVT01009197001 assembled CDS
Length = 248
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQF 256
R A+L +FR KRK+RC++KK+RY R+++A + R KGQF
Sbjct: 91 RAASLNRFRQKRKERCFDKKIRYNVRQEVALRMQRNKGQF 130
>GSVIVT01000951001 assembled CDS
Length = 362
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLP 263
A R A+ +++ K+K R Y+K +RYESRK A+ R RVKG+FV+ + P
Sbjct: 311 AQNRGNAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKATEAP 360
>GSVIVT01030127001 assembled CDS
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Query: 220 ALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL----PISET 267
A+ ++R K+K+R ++K+VRY SRK A+ R RVKG+FV+ + PISET
Sbjct: 361 AVMRYREKKKNRKFDKRVRYASRKARADVRQRVKGRFVKAGEAYDYDPISET 412
>GSVIVT01033017001 assembled CDS
Length = 195
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
A R A+ +++ K+K R YEK +RYESRK A+ R RVKG+FV+
Sbjct: 147 AQNRGHAMLRYKEKKKTRRYEKHIRYESRKARADTRKRVKGRFVK 191
>GSVIVT01024661001 assembled CDS
Length = 101
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 37/45 (82%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
+REA++ +++ KR+ R + KK+RY+ RK A++RPR+KG+FV++V
Sbjct: 50 RREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFVKRV 94