Jatropha Genome Database
- JcCB0398801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0398801.10 + phase: 0
(172 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01018101001 assembled CDS 157 3e-39
GSVIVT01000721001 assembled CDS 153 3e-38
GSVIVT01036283001 assembled CDS 137 3e-33
GSVIVT01017046001 assembled CDS 109 5e-25
GSVIVT01015350001 assembled CDS 103 4e-23
GSVIVT01009238001 assembled CDS 103 5e-23
GSVIVT01022048001 assembled CDS 97 5e-21
GSVIVT01017159001 assembled CDS 93 7e-20
GSVIVT01018099001 assembled CDS 91 3e-19
GSVIVT01000720001 assembled CDS 90 6e-19
GSVIVT01015449001 assembled CDS 86 7e-18
GSVIVT01021779001 assembled CDS 85 2e-17
GSVIVT01016972001 assembled CDS 65 2e-11
GSVIVT01035295001 assembled CDS 62 1e-10
GSVIVT01035866001 assembled CDS 59 8e-10
GSVIVT01028432001 assembled CDS 59 9e-10
>GSVIVT01018101001 assembled CDS
Length = 237
Score = 157 bits (396), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Query: 45 NGKRGFSETVDLKLNLSTXXXXXXXXXXXXTD------VPSSNDPAKPPAKAQVVGWPPI 98
+GKRGFSETVDLKLNL + +P + DPAKPPAKAQVVGWPP+
Sbjct: 36 SGKRGFSETVDLKLNLQSKESVVDLNENVKCPPKEKNLLPCTKDPAKPPAKAQVVGWPPV 95
Query: 99 RSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELS 158
RSFRKN+M+ QK++ +E EK FVKV MDGAPYLRKVDLK+YKSYQELS
Sbjct: 96 RSFRKNIMA-QKNSSEEGEKGSSGAA-------FVKVCMDGAPYLRKVDLKMYKSYQELS 147
Query: 159 DALGKMFSSFTIGN 172
DALGKMFSSFT+GN
Sbjct: 148 DALGKMFSSFTMGN 161
>GSVIVT01000721001 assembled CDS
Length = 235
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 90/133 (67%), Gaps = 14/133 (10%)
Query: 47 KRGFSETVDLKLNLSTXXX-------XXXXXXXXXTDVPSSNDPAKPPAKAQVVGWPPIR 99
KRGFSETVDLKLNLS + +P NDPA+PPAKAQVVGWPP+R
Sbjct: 34 KRGFSETVDLKLNLSGKEAGVDDNKVKSLQKEKSKSLLPCGNDPARPPAKAQVVGWPPVR 93
Query: 100 SFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSD 159
SFRKN+++ QK +E EK FVKVSMDGAPYLRKVDLK+Y SYQELS+
Sbjct: 94 SFRKNMLAGQKGGSEEGEKVSCNAA-------FVKVSMDGAPYLRKVDLKMYTSYQELSN 146
Query: 160 ALGKMFSSFTIGN 172
ALG MFSSFTIGN
Sbjct: 147 ALGNMFSSFTIGN 159
>GSVIVT01036283001 assembled CDS
Length = 170
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 79/96 (82%), Gaps = 8/96 (8%)
Query: 77 VPSSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVS 136
+P SNDPAKPPAKAQVVGWPP+RSFRKN+++VQK++ +E + FVKVS
Sbjct: 7 LPPSNDPAKPPAKAQVVGWPPVRSFRKNILTVQKNSSEEEKASSSAA--------FVKVS 58
Query: 137 MDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
MDGAPYLRKVDLK+YKSYQELSDALGKMFSSFTIGN
Sbjct: 59 MDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGN 94
>GSVIVT01017046001 assembled CDS
Length = 292
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 78/151 (51%), Gaps = 27/151 (17%)
Query: 43 INNGKRGFSETVD------LKLNLSTXXXXXXXXXXXXTDVPSSNDPAK----------- 85
++ KRGFS+ +D +N + PSS P +
Sbjct: 70 VSGAKRGFSDAIDGSGKWVFSVNGGSEKSCMPGPAMKDVAAPSSPKPVQEKKPQASAANE 129
Query: 86 ----PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAP 141
P AKAQVVGWPPIRSFRKN M+ N ++AE +VKVSMDGAP
Sbjct: 130 HASAPAAKAQVVGWPPIRSFRKNTMASSAKNNEDAE------GKSGLGCLYVKVSMDGAP 183
Query: 142 YLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
YLRKVDLK+Y +Y ELS AL KMFS FTIG
Sbjct: 184 YLRKVDLKIYCNYMELSSALEKMFSCFTIGQ 214
>GSVIVT01015350001 assembled CDS
Length = 170
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
P AKAQVVGWPPIRSFRKN M+ DE + +VKVSMDGAPYLRK
Sbjct: 11 PAAKAQVVGWPPIRSFRKNSMASNLPKNDEDAEGKLGSGCL-----YVKVSMDGAPYLRK 65
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIGN 172
VDLKLY +Y ELS AL KMFS FTIG
Sbjct: 66 VDLKLYSTYMELSSALEKMFSCFTIGQ 92
>GSVIVT01009238001 assembled CDS
Length = 318
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Query: 81 NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGA 140
N+ + P KAQVVGWPPIRSFRKN ++ N + K FVKVSMDGA
Sbjct: 156 NNSSAPATKAQVVGWPPIRSFRKNTLATTSKNTEVDGKAGPGAL-------FVKVSMDGA 208
Query: 141 PYLRKVDLKLYKSYQELSDALGKMFSSFTIG 171
PYLRKVDL+ Y +YQELS AL KMFS FTIG
Sbjct: 209 PYLRKVDLRNYSAYQELSSALEKMFSCFTIG 239
>GSVIVT01022048001 assembled CDS
Length = 193
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
P AKAQVVGWPPIR FRKN M+ +E + + KV+MDGAPYLRK
Sbjct: 93 PAAKAQVVGWPPIRYFRKNSMASNLPKNNEGAEGKLGSRCL-----YAKVNMDGAPYLRK 147
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIGN 172
VDLKLY +Y ELS AL KMFS FTIG
Sbjct: 148 VDLKLYCTYMELSSALEKMFSCFTIGQ 174
>GSVIVT01017159001 assembled CDS
Length = 294
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 25/126 (19%)
Query: 47 KRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSSNDPAKPPAKAQVVGWPPIRSFRKNVM 106
KRGFS+TV L NL DV S D PPAK Q+VGWPP+++ RKNV
Sbjct: 121 KRGFSDTVGL--NLRGPCNTDHASNPSENDV--SGDSKPPPAKTQIVGWPPVKASRKNVA 176
Query: 107 SVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFS 166
+ K +VKV++DGAPYLRKVDL++Y SYQ+L +L MFS
Sbjct: 177 KISK---------------------YVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFS 215
Query: 167 SFTIGN 172
F I N
Sbjct: 216 CFPIRN 221
>GSVIVT01018099001 assembled CDS
Length = 192
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 55/87 (63%), Gaps = 14/87 (16%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
P KAQVVGWPPIRSFRKN +K+ + A FVKVSMDGAPYLRK
Sbjct: 64 PATKAQVVGWPPIRSFRKNSFQPKKTEAEAA-------------GMFVKVSMDGAPYLRK 110
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIGN 172
+DLK+YK Y EL AL MF FTIG+
Sbjct: 111 IDLKVYKGYPELLQALQNMF-KFTIGD 136
>GSVIVT01000720001 assembled CDS
Length = 186
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 60/93 (64%), Gaps = 14/93 (15%)
Query: 79 SSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMD 138
S D PP KAQVVGWPP+RS+RKN S Q+ G EAE +VKVSMD
Sbjct: 59 SDADDDAPPPKAQVVGWPPVRSYRKN--SFQQRKG-EAE----------GAGMYVKVSMD 105
Query: 139 GAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG 171
GAPYLRK+DLK+YKSY EL +AL MF F IG
Sbjct: 106 GAPYLRKIDLKVYKSYPELLNALENMF-KFRIG 137
>GSVIVT01015449001 assembled CDS
Length = 216
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 27/127 (21%)
Query: 47 KRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSS--NDPAKPP-AKAQVVGWPPIRSFRK 103
KRG+S+TVD + + D P + P K P +KAQVVGWPP+RS RK
Sbjct: 44 KRGYSDTVDFRFRCCSGESSAKAEK---VDWPGKEISGPGKAPDSKAQVVGWPPVRSVRK 100
Query: 104 NVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGK 163
+ K +VKV++DGAPYLRKVDL++++SYQ+L AL
Sbjct: 101 KALKSCK---------------------YVKVAVDGAPYLRKVDLEVHRSYQQLLMALET 139
Query: 164 MFSSFTI 170
MF FTI
Sbjct: 140 MFDCFTI 146
>GSVIVT01021779001 assembled CDS
Length = 199
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 14/93 (15%)
Query: 80 SNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDG 139
S+ P KAQVVGWPP+RS+RK+ +K+ +E ++KVSMDG
Sbjct: 65 SHRETAPAPKAQVVGWPPVRSYRKSCFQPKKTEAEEGR-------------TYLKVSMDG 111
Query: 140 APYLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
APYLRK+DLK+YK Y EL AL +MF F++G
Sbjct: 112 APYLRKIDLKVYKGYPELLKALEEMF-KFSVGQ 143
>GSVIVT01016972001 assembled CDS
Length = 364
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 75 TDVPSSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSN-GDEAEK------XXXXXXXXX 127
T VP+S+ K A VVGWPPIRSFRKN+ S S +E++
Sbjct: 177 TAVPNSSQ--KRSAPTAVVGWPPIRSFRKNLASSSSSKPANESQDVVPNKIASEKPVEVG 234
Query: 128 XXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVK++MDG P RKVDL Y SY++LS A+ ++F
Sbjct: 235 KKGLFVKINMDGVPIGRKVDLTAYDSYEKLSSAVDELF 272
>GSVIVT01035295001 assembled CDS
Length = 205
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 75 TDVPSSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEA------EKXXXXXXXXXX 128
T VP+S+ K A VVGWPPIRSFRKN+++ S + E+
Sbjct: 15 TAVPNSSQ--KRIEHAPVVGWPPIRSFRKNLVNSSSSKPESESPNKIPEETGYGKSESSK 72
Query: 129 XXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVK++MDG P RKVDLK SY++LS A+ +F
Sbjct: 73 TGLFVKINMDGVPIGRKVDLKACDSYEKLSYAVDDLF 109
>GSVIVT01035866001 assembled CDS
Length = 227
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 92 VVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLY 151
VVGWPP++S+RK V+ Q G +VKV M+G RK++LKLY
Sbjct: 106 VVGWPPVKSWRKKVI-CQHQGGRMVFDRTAEKESGGAGPIYVKVKMEGVAIARKINLKLY 164
Query: 152 KSYQELSDALGKMFS 166
+SYQ L ++L MF+
Sbjct: 165 QSYQMLKNSLTAMFA 179
>GSVIVT01028432001 assembled CDS
Length = 232
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 90 AQVVGWPPIRSFRKNVMSVQKSN--GDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVD 147
+QVVGWPPIR++R N ++ Q + ++ FVKV+MDG P RKVD
Sbjct: 63 SQVVGWPPIRAYRMNSLANQSKSLVTEDLNSMVEKSKRPLNTSFFVKVNMDGIPIGRKVD 122
Query: 148 LKLYKSYQELSDALGKMF 165
L + Y+ L+ L +MF
Sbjct: 123 LSAHSCYETLAKTLEEMF 140