Jatropha Genome Database
- JcCB0395821.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0395821.10 + phase: 0
(366 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01026027001 assembled CDS 112 2e-25
GSVIVT01031692001 assembled CDS 110 8e-25
GSVIVT01013538001 assembled CDS 105 3e-23
GSVIVT01013506001 assembled CDS 100 1e-21
GSVIVT01030585001 assembled CDS 96 2e-20
GSVIVT01026026001 assembled CDS 84 9e-17
GSVIVT01010911001 assembled CDS 68 6e-12
GSVIVT01031694001 assembled CDS 68 6e-12
GSVIVT01000395001 assembled CDS 57 2e-08
>GSVIVT01026027001 assembled CDS
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 159/378 (42%), Gaps = 69/378 (18%)
Query: 5 IPEEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVCGSNFYD 64
IP+EI+ +IL VKSL+RFKC+SKS +IS DF K L + D
Sbjct: 26 IPDEIILEILCLLPVKSLMRFKCVSKSWREMISDPDFEKKQLAVAARD------------ 73
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAKGRADAYS 124
SGE S L P + ++C + C + + + H D
Sbjct: 74 ---SGEV--YNSRLIMHYPSMKLKSCPLSC---------LFYEPVGHSVNHEYPENDI-- 117
Query: 125 LVLWNPSTRQREVLPNPKTFAPYNTFVSYGLGYDSATNYYKVVQCG--------YYRILV 176
+ +WNPSTR+ LP P +F V+YG GYDS + YKV + G Y++ V
Sbjct: 118 IFVWNPSTREFRRLP-PISFMQCFHLVAYGFGYDSIADDYKVTRVGCYCIGRYYEYQVRV 176
Query: 177 FSLESYSWGKPKDFGFDITFSQAGTLTHGA--FHWIAELENSSKIVVAFNLSDEKIVQLQ 234
FSL W K ++F + + G +G+ F + + EN VV +L+ E +
Sbjct: 177 FSLRGNVWRKIENFPCYLFTDEPGIHVNGSINFGGVGDSENYYWSVVGLDLASESYRMVP 236
Query: 235 LPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGGNSPGAYLNIWVMKEYGVTASWNK 294
LP + L G C + +++WVM++YGV SWNK
Sbjct: 237 LPDCADPNVKPM----IMALGGRFCTIFDNDEA----------VDVWVMEQYGVKKSWNK 282
Query: 295 LITIA----QERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKNKELKTL----KTF 346
L+T+ V F ++ A+ + + + L D + T+
Sbjct: 283 LVTVPYFPDPMTVDCTKPVFFLRDGAILM---EFYGLLVLYNIDRDESTIPTIYGTRHCH 339
Query: 347 EIEVPEMVSYVESLVSPN 364
E+EV Y+E++VSPN
Sbjct: 340 EVEV-----YLETIVSPN 352
>GSVIVT01031692001 assembled CDS
Length = 357
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 170/396 (42%), Gaps = 81/396 (20%)
Query: 5 IPEEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVC------ 58
+P I+ +ILL+ VKSL+R +C+ K+ +LIS F+KSHL Q C
Sbjct: 4 LPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSHLRLPQTQARTQFCTLNYGE 63
Query: 59 -GSNFYDV------------NNSGEAVPVESPLEQQLPFLNG--ENCTILCSSDGLVLLR 103
G N+Y V +++G A+ + + + G +L S DGL+ L
Sbjct: 64 PGDNYYLVVGASTKDCEAFSDDNGGALAFDYLFD-----IGGFKYEVVLLDSCDGLLCL- 117
Query: 104 ISIDKLNHRKTKAKGRADAYSLVLWNPSTRQ-REVLPNPKTFAPYNTFVSYGLGYDSATN 162
+D N +VLWNPSTRQ ++ PNP + +G GYDS +
Sbjct: 118 --VDLAN-------------KIVLWNPSTRQCNQLPPNPNVL---DFLGCHGFGYDSFAD 159
Query: 163 YYKVVQCGYYR------ILVFSLESYSWGKPKDFGFDITFSQAGTLTHGAFHWIA-ELEN 215
YKV + VFSL+S W + ++ T+ HGA HW+A +
Sbjct: 160 DYKVFLVSMLNPNFETVVDVFSLKSNKWKRIQEKHHTRAARMCATVLHGALHWVAYDPIL 219
Query: 216 SSKIVVAFNLSDEKIVQLQLPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGGNSPG 275
++AF+ E+ ++ +P +L V+ G LC+ +G P
Sbjct: 220 GFDTIMAFDFEKERFREMAIP-----REEEELYVKLRVVGGCLCV--------HGSKDPS 266
Query: 276 AYLNIWVMKEYGVTASWNKLITIAQERVYSVSAHF------CFKNDAVFIVNKSLWDISA 329
+WVMKEYGV SW+K+ + +++ F N+ + +VNK
Sbjct: 267 ---KMWVMKEYGVDTSWSKMASPYNSLRNNLNEEFRCELLHTLNNEHMLLVNK-----EK 318
Query: 330 LLRYDLKNKELKTLKTFEIEVPEMVS-YVESLVSPN 364
L+ D K K + + + YVE+LVSP+
Sbjct: 319 LMLCDQKENTYKNIMPYGRWFRHDANLYVETLVSPH 354
>GSVIVT01013538001 assembled CDS
Length = 711
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 144/309 (46%), Gaps = 49/309 (15%)
Query: 5 IPEEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVCGSNF-Y 63
IPE I+ DIL + VKSLLRF+C+ K+ +LIS F+++HL + + V G +
Sbjct: 4 IPEVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLRQQH---KRPVIGLVVPH 60
Query: 64 DVNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAKGRADAY 123
V++ + LE L N T+L S +GL+ + K K
Sbjct: 61 SVDDPLHKDDLAVDLELHLGIPNKRTTTVLDSCNGLLCVVDCYYGFYSLKPPQK------ 114
Query: 124 SLVLWNPSTRQREVLPNPKTFAPYNTFVSYGLGYDSATNYYKVVQCGYY------RILVF 177
L+LWNPSTRQ +P P +F Y + Y YD ++ YK+V+ + I +F
Sbjct: 115 -LILWNPSTRQCNHIPCP-SFVGYQNCM-YSFFYDPGSDDYKIVRIFTFLGKDKTGIDIF 171
Query: 178 SLESYSWGKPKDFGFDITFSQAGTLTHGAFHWIA-------ELENSSKIVVAFNLSDEKI 230
+L++ W + ++ + + T +G HW+A E E SS +VAF+L +EK
Sbjct: 172 TLKTNKWRRVEETHSSVIGYWSATYFNGNLHWLAFRYGGYGEDERSS--MVAFSLREEKF 229
Query: 231 VQLQLPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGGNSPGAYLN-IWVMKEYGVT 289
+++LP L VL G LC+ G Y N WVM+EYG+
Sbjct: 230 QEMELPSQRAVFG-------LRVLGGCLCV-------------DGLYTNDKWVMEEYGIK 269
Query: 290 ASWNKLITI 298
SW LI I
Sbjct: 270 ESWKSLIAI 278
>GSVIVT01013506001 assembled CDS
Length = 423
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 169/380 (44%), Gaps = 54/380 (14%)
Query: 8 EIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGD-----LSKFVCGS-- 60
E + DI L+ VKS++RF+C+ KS +L DFI HL ++ + L K + S
Sbjct: 23 ENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLLFKHLSSSEQ 82
Query: 61 NFYDVNNS---GEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAK 117
Y + ++ E +E P+ + + I+ SS+GL+ L ++ K
Sbjct: 83 EIYSLRSNIAFAEVRRLEVPVPSKTDYYQ-----IVGSSNGLICL---------TESNFK 128
Query: 118 GRADAYSLVLWNPSTRQREVLP--NPKTFAPYNTFVSYGLGYDSATNYYKVVQCGYY--- 172
G + +L LWNP+ R+ + LP + F V G + N YKVV+ Y+
Sbjct: 129 GSYLSLNLFLWNPAIREFQTLPKYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMRN 188
Query: 173 ---RILVFSLESYSWGK-PKDFGFDITFSQAGTLTHGAFHWIA----ELENSSKIVVAFN 224
V+SL + SW K + I + + T +GA HW+A E++N+ ++++F+
Sbjct: 189 KTSEADVYSLRTGSWRKVDANICCYIHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFD 248
Query: 225 LSDEKIVQLQLPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGGNSPGAYLNIWVMK 284
++ + ++ LP L+ +G+L +L N ++WVM+
Sbjct: 249 MAKDVFKEIMLPDFGYDELIRKC---LADYKGSLSVLFYDAYHSNEN------CDVWVME 299
Query: 285 EYGVTASWNKLITIAQERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKNKELKTLK 344
EYGV SW K TI E + F +A+ KS IS N + +
Sbjct: 300 EYGVAKSWTKHFTIRHEIEIIIPFEFFDNGEAILQKKKSGGFISW-------NPDGIRFR 352
Query: 345 TFEIEVP-EMVSYVESLVSP 363
+ P +V Y+ESLVSP
Sbjct: 353 DLGVSGPARLVEYMESLVSP 372
>GSVIVT01030585001 assembled CDS
Length = 423
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 168/393 (42%), Gaps = 71/393 (18%)
Query: 5 IPEEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHR---------------- 48
I E + D+LL+ VKS++RFKC+ +S +L + DFI +L R
Sbjct: 21 ILSENLVDVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRRAITHNNCCMLLKYLSS 80
Query: 49 SQGDLSKFVCGSNFYDVNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDK 108
S+ ++ C +F + VP ++ I+ SS+GL+ L
Sbjct: 81 SEEEVYSLRCDKDFAEFRRLQVPVPSKTDYYH-----------IVGSSNGLICL------ 123
Query: 109 LNHRKTKAKGRADAYSLVLWNPS-TRQREVLP----NPKTFAPYNTFVSYGLGYDSATNY 163
++ KG LWNPS T Q + LP N +P+ V G + +
Sbjct: 124 ---TESNNKGSYVTVDTFLWNPSVTAQWKPLPKYLINNMMTSPF-MVVGLGFAFHPQIDD 179
Query: 164 YKVVQCGY------YRILVFSLESYSWGK-PKDFGFDITFSQAGTLTHGAFHWIAELEN- 215
YKVV+ Y Y + V+SL+ +W I + + T +GA HW+A +N
Sbjct: 180 YKVVRIVYFLKSKTYEVHVYSLKQDAWKNIDAKVHCHIHDTVSRTFVNGALHWLAAKKNQ 239
Query: 216 ----SSKIVVAFNLSDEKIVQLQLPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGG 271
S ++++F++ ++ + ++ LP L+ +G L +L + CN
Sbjct: 240 GRGKSDDLILSFDMVEDNLREMILPEFGYDESSTQKC--LADYKGLLSVLVYNAHRCNDN 297
Query: 272 NSPGAYLNIWVMKEYGVTASWNKLITIAQERVYSVSAHFCFKNDAVFIVNKSLWDISALL 331
+IWVM EYGV +SW K T + + F N V + NK+ L+
Sbjct: 298 ------CDIWVMDEYGVASSWTKRFTFCLDVEILILLDF-LDNGEVVVQNKN----GGLV 346
Query: 332 RYDLKNKELKTLKTFEIEVPE-MVSYVESLVSP 363
D +++ LK + P +V Y+E+LVSP
Sbjct: 347 ACDPNGGKIRDLK---VAGPACLVKYIETLVSP 376
>GSVIVT01026026001 assembled CDS
Length = 243
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 37/257 (14%)
Query: 124 SLVLWNPSTRQREVLPNPKTFAPYNTFVSYGLGYDSATNYYKVVQ---CGY-----YRIL 175
++ +WNPS ++ + LP+ K F VSY GYDS T+ YKVV+ C Y +
Sbjct: 5 TIFVWNPSIKESKRLPS-KPFEQLFYLVSYAFGYDSITDDYKVVRLVCCSINDSYEYHVE 63
Query: 176 VFSLESYSWGKPKDFGFDITFSQAGTLTHGAFHWIAELE--NSSKIVVAFNLSDEKIVQL 233
VFSL S +W K + F + + +AG +G+ +W + N + + +L+ E +
Sbjct: 64 VFSLRSNAWRKIRSFPYFLFTDEAGKHVNGSINWAVSRDKNNDHWFIASLDLATESYEVV 123
Query: 234 QLPXXXXXXXXXXXXXELSVLQGNLCLLESIKNICNGGNSPGAYLNIWVMKEYGVTASWN 293
P + VL G C++ +I +++WVM+EYGV SW+
Sbjct: 124 PQPDCANETLKPI----IRVLGGQFCIIFEYDDI----------IDVWVMQEYGVKESWS 169
Query: 294 KLITI-----AQERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKNKELKTLKTFEI 348
KL+T+ + Y+ F K A+ I + L+ Y+ E + + +
Sbjct: 170 KLVTVPFFSDPLDANYA-KPLFYLKEGAILIDFYGM-----LILYNFNRNESTSPMIYGV 223
Query: 349 -EVPEMVSYVESLVSPN 364
E+ Y+ES+VSPN
Sbjct: 224 HHYHEVEVYLESMVSPN 240
>GSVIVT01010911001 assembled CDS
Length = 415
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 8 EIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVCG---SNFYD 64
+++ +I L++ VK LLRF+ +SK SLIS F H RS + + G SNF D
Sbjct: 37 DLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLGLPNSNF-D 95
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAKGRADAYS 124
+ E E PL + L F+ G+ +L++ L ++ G + Y
Sbjct: 96 FISFDEKKASEPPL-RSLDFIG--------DPLGVKVLQVCNGLLCCSTVRSLGTSRNYY 146
Query: 125 LVLWNPSTRQREVLPNPKTFAPYNTFVSYGLGYD-SATNYYKV-------VQCGYYRILV 176
+ N +TR+ VLP P + +T L +D S + YY V V +Y+I +
Sbjct: 147 IC--NLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEI 204
Query: 177 FSLESYSW---GKPKDFGFDITFSQAGTLTHGAFHWIA 211
+S + W GKP FD+ F G +GA HWI+
Sbjct: 205 YSSGTGDWRLSGKPFRAPFDMVFYD-GVFWNGAVHWIS 241
>GSVIVT01031694001 assembled CDS
Length = 184
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 5 IPEEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVCGSNFYD 64
+P I+ +ILL+ VKSL+RF+C+ K+ +LIS F++SH Q +C ++ +
Sbjct: 4 LPLHIIENILLRLPVKSLIRFRCVCKAWRTLISHPHFVRSHFRLPQTQARTRLCIIDYSE 63
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVL---LRISIDKLNHRKT---KAKG 118
++ V S ++C +DG L I K H G
Sbjct: 64 RGDNHSMVVRAS----------TKDCEAFSDNDGGSLAFDYLFDIGKFKHEVVLLDSCDG 113
Query: 119 R---AD-AYSLVLWNPSTRQ-REVLPNPKTFAPYNTFVS-YGLGYDSATNYYKV 166
AD A +VLWNPSTRQ ++ PNP FV +G GYDS+ + YK+
Sbjct: 114 LLCIADLANKIVLWNPSTRQFNQLPPNPNVV----DFVGCHGFGYDSSADDYKI 163
>GSVIVT01000395001 assembled CDS
Length = 260
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 23/154 (14%)
Query: 7 EEIVADILLKSQVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFVCGSNFYDVN 66
E+I +IL + VKSLL K +SK LI S DF+ S L S+ + S + +
Sbjct: 20 EDITTNILSRLPVKSLLMCKSVSKRWRRLICSPDFVLSQLRWSREN------PSLIFFLR 73
Query: 67 NSGEAVPVESPLEQQLPFLNGE---NCTILCSSDGLVLLRISIDKLNHRKTKAKGRADAY 123
E + + + +++P G+ NC ++CS +G + L I + NH
Sbjct: 74 YENELIKISGEVFERIPLPFGQRPNNCDMICSFNGFICLTNYIGR-NH------------ 120
Query: 124 SLVLWNPSTRQREVLPNPK-TFAPYNTFVSYGLG 156
++++WNP+T++ ++LP + P V+YG G
Sbjct: 121 NILIWNPATQEVQLLPTTTLSKKPPKIGVAYGPG 154