Jatropha Genome Database

JcCB0388281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0388281.10 - phase: 0 /partial
         (115 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01029283001 assembled CDS                                       175   4e-45
GSVIVT01016158001 assembled CDS                                       155   4e-39
GSVIVT01018065001 assembled CDS                                        97   2e-21
GSVIVT01021804001 assembled CDS                                        91   1e-19
GSVIVT01018058001 assembled CDS                                        90   2e-19
GSVIVT01033238001 assembled CDS                                        85   8e-18
GSVIVT01001466001 assembled CDS                                        83   3e-17
GSVIVT01009350001 assembled CDS                                        79   3e-16
GSVIVT01000116001 assembled CDS                                        77   1e-15
GSVIVT01000123001 assembled CDS                                        77   2e-15
GSVIVT01018061001 assembled CDS                                        77   2e-15
GSVIVT01021801001 assembled CDS                                        66   4e-12
GSVIVT01007009001 assembled CDS                                        49   3e-07
GSVIVT01003129001 assembled CDS                                        49   4e-07

>GSVIVT01029283001 assembled CDS
          Length = 1080

 Score =  175 bits (444), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 97/113 (85%)

Query: 3   GSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDA 62
            +G   S P P GD+GI Q+ L+++TRDH  + L++  GVKGL++LLKTN EKGI GDDA
Sbjct: 106 ANGIPISPPIPNGDYGIGQEELASMTRDHNSNALQQYDGVKGLAELLKTNLEKGILGDDA 165

Query: 63  DLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           DLL+R+NAFGSNTYP+KKGRSFWMFLWEAWQDLTLIILM+AA+ASLALGIKTE
Sbjct: 166 DLLRRRNAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAIASLALGIKTE 218


>GSVIVT01016158001 assembled CDS
          Length = 1152

 Score =  155 bits (391), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 1/111 (0%)

Query: 5   GTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADL 64
           GTT S P+P GD+ I  ++L+++TRDH    L+  GG + LSDLL+TN EKG  GDDA L
Sbjct: 180 GTTVSPPSPVGDYLIGVEQLASMTRDHNFSALQEYGGAR-LSDLLETNLEKGTDGDDASL 238

Query: 65  LKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            KR+N FGSNTYPQKKGRSF MFLWEAWQDLTLIIL+VAA ASLALGIKTE
Sbjct: 239 SKRRNMFGSNTYPQKKGRSFLMFLWEAWQDLTLIILIVAAAASLALGIKTE 289


>GSVIVT01018065001 assembled CDS
          Length = 4083

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 67/96 (69%)

Query: 18   GIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTYP 77
             I+   L+ + ++  LD+L  +GGV+G++D LKT+T+ GIHG   D+ +R+  FGSNTYP
Sbjct: 3302 NIDHTSLTAVVKEKNLDQLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSNTYP 3361

Query: 78   QKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
            +   +SF+ F+ EA++DLT++IL+  A  SL  GIK
Sbjct: 3362 RPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIK 3397



 Score = 77.0 bits (188), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 62/101 (61%)

Query: 13  PKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFG 72
           P     I+Q  L+ + +   L+ L   GGV+G++D L+T+ + GI G   D+  R+ AFG
Sbjct: 69  PDAFSSIDQTTLNAIVKGKNLNLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFG 128

Query: 73  SNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
           SNTY +   +S + F+ EA++D+T++IL+  A  SL  GIK
Sbjct: 129 SNTYKRPPAKSLFHFVVEAFKDVTILILLFCAALSLGFGIK 169



 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 60/95 (63%)

Query: 19   IEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTYPQ 78
            I+Q  L+ + ++  +D L   GGV+ ++D L+T+ + GI G   D+  R+ AFGSNTY +
Sbjct: 1560 IDQTTLTEIVKEKNVDLLLEFGGVESVADALETDIKNGISGAVDDVALRQEAFGSNTYKR 1619

Query: 79   KKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
               +S + F+ EA++DLT+ IL+  A  SL  GIK
Sbjct: 1620 PPAKSLFHFVVEAFKDLTVFILLFCATLSLGFGIK 1654



 Score = 76.3 bits (186), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 5/97 (5%)

Query: 18   GIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTYP 77
             I+   L+ + ++  LD+L  +GGV+G++D LKT+T+ GIHG   D+ +R+  FGSNTYP
Sbjct: 2514 NIDHTSLTAVVKEKSLDQLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGSNTYP 2573

Query: 78   QKKGRSFWMF--LWEAWQD---LTLIILMVAAVASLA 109
            +   +SF+ F  L E W D   + + + +V +V++++
Sbjct: 2574 RPPTKSFFYFHGLKEGWYDGGSIFVAVFLVISVSAVS 2610



 Score = 57.4 bits (137), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 13   PKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFG 72
            P     I+Q  L+ + ++  L  L   GGV+G++D L+T+ + GI G   D+  R+ AFG
Sbjct: 920  PDAFSSIDQTTLTEIVKEKNLKLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFG 979

Query: 73   SNTYPQKKGRSFWMF--LWEAWQDLTLIILMVAAVASLALGI 112
            SNTY +   +S + F  L E W D   I + ++ V  ++L I
Sbjct: 980  SNTYKRPPTKSLFHFHGLKEGWYDGGSIFVALSKVNVVSLKI 1021


>GSVIVT01021804001 assembled CDS
          Length = 722

 Score = 90.5 bits (223), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 4/115 (3%)

Query: 1   MLGSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGD 60
           +L S +++ +P     F I+Q  L+   RD   + L + GG+K L  +LKT+ + GI G 
Sbjct: 111 VLKSDSSDHVPF----FNIDQKMLTETVRDKDFERLHQFGGIKQLVAVLKTDEKDGIDGH 166

Query: 61  DADLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           +ADL  R++ FGSN Y +   +SF+ F+ EA++D  +IILMV A+ SL  GIK E
Sbjct: 167 EADLKHRRDVFGSNQYRRPPKKSFFSFVVEAFKDTIIIILMVCAILSLGFGIKQE 221


>GSVIVT01018058001 assembled CDS
          Length = 1732

 Score = 89.7 bits (221), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/100 (43%), Positives = 68/100 (68%), Gaps = 1/100 (1%)

Query: 15   GDFG-IEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGS 73
             DF  ++Q  L+ L ++  LD+L   GGV+G++  L+++ + GIHG   D+  R+ AFGS
Sbjct: 1095 ADFSNVDQTSLTALVKEKNLDQLLGFGGVEGVAVALRSDVKNGIHGAAKDVAWRQEAFGS 1154

Query: 74   NTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
            NTYP+   +SF+ F+ EA++DLT+++L+V A  SL  GIK
Sbjct: 1155 NTYPRPPTKSFFHFVVEAFKDLTILVLLVCATLSLCFGIK 1194



 Score = 69.3 bits (168), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 19  IEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTYPQ 78
           I+Q  L+ L +   LD+L  +GGV+G+++ LK + + GIHGD  D+ +RK  FGSNTY +
Sbjct: 138 IDQTSLTDLVKAKNLDQLLELGGVEGVAEALKADFKNGIHGDVQDVARRKQEFGSNTYQK 197

Query: 79  KKGRSFWMFLWEAWQDLTLIILMVAAVASLA 109
              +S   F+ E W D   I L V  V S++
Sbjct: 198 PPPKSILHFV-EGWYDGGSIFLAVFLVISVS 227


>GSVIVT01033238001 assembled CDS
          Length = 1033

 Score = 84.7 bits (208), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 66/99 (66%), Gaps = 2/99 (2%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           FGI+ D L+++ R H +  L+  GG++GL+  +  + ++G+    +D+  R+N +G N Y
Sbjct: 94  FGIDPDELASIVRGHDIMGLKAHGGLEGLARKVHVSLDEGV--KSSDIAMRQNIYGLNRY 151

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            +K  R+F MF+W+A  DLTLIILM+ AV S+ +G+ TE
Sbjct: 152 TEKPSRTFLMFVWDALHDLTLIILMICAVISIGVGLPTE 190


>GSVIVT01001466001 assembled CDS
          Length = 969

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 2/102 (1%)

Query: 14  KGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGS 73
           +  + IE D L+++ R H +  LE  GG +GL+  +  + + G+    +++  R++ +G 
Sbjct: 91  QAGYEIEPDELASIVRAHDIKGLEFNGGAEGLAGKVCVSLDTGV--KTSEVHSRQSIYGL 148

Query: 74  NTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           N Y +K   +FWMF+WEA QDLTLIILMV A  S+ +GI TE
Sbjct: 149 NQYVEKPSGTFWMFIWEALQDLTLIILMVCAAVSIGVGIATE 190


>GSVIVT01009350001 assembled CDS
          Length = 419

 Score = 79.3 bits (194), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 59/99 (59%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           F I  D L ++   H L +L+  GGV+G+++ L T+T  GI   D  L KRK  +G N +
Sbjct: 94  FQICADELGSIVEGHDLKKLKIHGGVQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKF 153

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            + K   FW+F+WEA  D+TL+IL V A  SL +GI  E
Sbjct: 154 TETKVPGFWVFVWEALHDMTLMILAVCAFVSLLVGIIME 192


>GSVIVT01000116001 assembled CDS
          Length = 594

 Score = 77.4 bits (189), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 59/99 (59%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           F I  D L ++   H + +L+  GGV G+++ L T+T  G+  D+  L  R+  +G N +
Sbjct: 41  FQICADELGSIVEGHDVKKLKIHGGVDGIAEKLSTSTTNGLTADNKLLNHRQEIYGINKF 100

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            + + R F +F+WEA  D+TLIIL V A+ SL +GI  E
Sbjct: 101 TETQARGFLVFVWEALHDMTLIILAVCALVSLIVGIAME 139


>GSVIVT01000123001 assembled CDS
          Length = 732

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 59/99 (59%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           F I  D L ++   H + +L+  GGV G+++ L T+T  G+  D+  L  R+  +G N +
Sbjct: 95  FQICADELGSIVEGHDVKKLKIHGGVDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKF 154

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            + + R F +F+WEA  D+TLIIL V A+ SL +GI  E
Sbjct: 155 TETQARGFLVFVWEALHDMTLIILAVCALVSLIVGIAME 193


>GSVIVT01018061001 assembled CDS
          Length = 3100

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 3/103 (2%)

Query: 8   ESLPTPKGDFG-IEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLK 66
           ES+  P   F  I+   L+ + ++  LD+L  +GGV+G++D LKT+T+ GIHG   D+ +
Sbjct: 294 ESILDPHVAFSNIDHTSLTAVVKEKNLDQLRELGGVEGVADALKTDTKNGIHGAVEDVAE 353

Query: 67  RKNAFGSNTYPQKKGRSFWMF--LWEAWQDLTLIILMVAAVAS 107
           R+  FGSNTYP+   +SF+ F  L E W D   I + ++ V++
Sbjct: 354 RQETFGSNTYPRPPTKSFFYFHGLKEGWYDGGSIFVALSKVSN 396



 Score = 71.6 bits (174), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 2/101 (1%)

Query: 13   PKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFG 72
            P     I+Q  L+ + ++  LD L   GGV+ ++D L+T+ + GI G   D+  R+  FG
Sbjct: 1871 PDAFSSIDQTSLTAIVKEKNLDLLLEFGGVESVADALETDVKNGICGAVHDIALRQEVFG 1930

Query: 73   SNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
            SNTY  +  +S + F+ E ++DLT++IL++ A  SL  GIK
Sbjct: 1931 SNTY--QTAKSLFHFVMEPFKDLTILILLLCATLSLGSGIK 1969



 Score = 62.8 bits (151), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 13/114 (11%)

Query: 7    TESLPTPKGDFGI------------EQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTE 54
            +++LPT    F I            +Q  L+ + +   L +L  +GGV+G++ +L+T+ E
Sbjct: 1090 SKTLPTSPSSFVILNVKPQHGFSNFDQHSLTQIVKHKSLTQLLELGGVEGVAIVLETDAE 1149

Query: 55   KGIHGDDADLLKRKNAFGSNTYPQKKGRSFWMF-LWEAWQDLTLIILMVAAVAS 107
             GIHG    +  R+ AFGSNTY +   +SF+ F L E W D   I++ ++ V++
Sbjct: 1150 NGIHGAVEGVTCRRKAFGSNTYQEPPTKSFFYFGLKEGWYDGGSILVALSKVSN 1203



 Score = 60.1 bits (144), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 20   EQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTYPQK 79
            +Q  L+ + +   L +L  +GGV+G++ +L+T+ + GIHG   D+ +R+ AFGSN Y + 
Sbjct: 2425 DQHSLTQIVKHKSLTQLLELGGVEGVAIILETDVKNGIHGAVEDVTRRRKAFGSNAYRKP 2484

Query: 80   KGRSFWMFLW--EAWQDLTLIILMVAAVA 106
              +SF+ F    E W D   I++ ++ V+
Sbjct: 2485 PTKSFFYFQGPKEGWYDGGSILVALSKVS 2513


>GSVIVT01021801001 assembled CDS
          Length = 1291

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 51  TNTEKGIHGDDADLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLAL 110
           TN E GI GDD DL +R+ AFG N Y ++  +SF+ F+  + +D T++IL+V A  SLA 
Sbjct: 2   TNPETGIRGDDEDLKRRREAFGINNYHRRPPKSFFYFVVGSLKDPTILILLVCASLSLAF 61

Query: 111 GIKTE 115
           GIK E
Sbjct: 62  GIKEE 66



 Score = 63.9 bits (154), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 19   IEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY-- 76
            + Q  L+ + RD  L+ L + GGVK L  LL TN + GI G +ADL+ R+N FGSN Y  
Sbjct: 1012 VGQRMLTEMVRDKDLERLRQFGGVKQLPALLGTNEKNGIDGHEADLIHRRNVFGSNEYTK 1071

Query: 77   PQKKGRSFWMFLWEAWQDLTLIIL 100
            P KKG   ++   E W D   II 
Sbjct: 1072 PPKKG---FLSPREGWYDGGSIIF 1092


>GSVIVT01007009001 assembled CDS
          Length = 1090

 Score = 49.3 bits (116), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 10/113 (8%)

Query: 10  LPTPKGDF------GIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDAD 63
           +P+  GD        ++   ++T+ ++  LD L + GGV G+++ L T+ EKGI GD+ D
Sbjct: 113 IPSDAGDVRSSTNANLQHANIATIVKNKDLDSLIKFGGVPGIAEALHTDLEKGIPGDEQD 172

Query: 64  L-LKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           L L+R  +  S T P     +F+  L +A     + +L+++    L  GIK E
Sbjct: 173 LHLRRLASPISKTEPSP---TFFQCLLKACNSYIIFLLLLSMALYLGFGIKKE 222


>GSVIVT01003129001 assembled CDS
          Length = 862

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 1   MLGSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGD 60
           +L S  T  +  P      +Q  L+ + ++  L  L   GGV+G++  L  + + GI G+
Sbjct: 147 LLHSHLTVDIQPPTSYHHDDQSDLTEMVKEKDLIALRGFGGVEGVAATLLIDPQHGILGN 206

Query: 61  DADLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVAS 107
           + D+ +R++ FGSNTY +   +  + F+ E W +   I + ++ +++
Sbjct: 207 EDDVRRRRDKFGSNTYYKPPPKGLFYFV-EGWYEGGSIFVALSKISN 252