Jatropha Genome Database

JcCB0384311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0384311.10 + phase: 0 /partial
         (243 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01016135001 assembled CDS                                       446   e-126
GSVIVT01033168001 assembled CDS                                       441   e-124
GSVIVT01032523001 assembled CDS                                       429   e-121
GSVIVT01009290001 assembled CDS                                       395   e-111
GSVIVT01002010001 assembled CDS                                       359   e-100
GSVIVT01033767001 assembled CDS                                       275   2e-74
GSVIVT01034719001 assembled CDS                                       270   5e-73
GSVIVT01025737001 assembled CDS                                       267   3e-72
GSVIVT01031405001 assembled CDS                                       266   9e-72

>GSVIVT01016135001 assembled CDS
          Length = 436

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/239 (88%), Positives = 218/239 (91%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQ LIK EV+ WSQKG+NIIYRHR+VRT
Sbjct: 13  EVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQWLIKGEVSKWSQKGINIIYRHRLVRT 72

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAGNLKSAMNCDYVK YEFVAIFDADFQPNPDFL  TVPHFKD PELGLVQARW FVN
Sbjct: 73  GYKAGNLKSAMNCDYVKAYEFVAIFDADFQPNPDFLMQTVPHFKDNPELGLVQARWAFVN 132

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
           KDENLLTRLQNINLCFHFEVEQQV            TAG+WRIK LE+SGGWLERTTVED
Sbjct: 133 KDENLLTRLQNINLCFHFEVEQQVNGVFINFFGFNGTAGVWRIKTLEDSGGWLERTTVED 192

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK
Sbjct: 193 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 251


>GSVIVT01033168001 assembled CDS
          Length = 403

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 207/239 (86%), Positives = 220/239 (92%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VYEQSISAVCQ+DWPKDRLLIQVLDDSDDESIQCLIKAEV  WSQ+G+NI+YRHR+VRT
Sbjct: 13  EVYEQSISAVCQIDWPKDRLLIQVLDDSDDESIQCLIKAEVYNWSQQGINIVYRHRLVRT 72

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAGNLKSAM+CDYVK+YEFVAIFDADFQPNPDFLK TVPHF+  P+LGLVQARW FVN
Sbjct: 73  GYKAGNLKSAMSCDYVKNYEFVAIFDADFQPNPDFLKQTVPHFQGNPDLGLVQARWAFVN 132

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
           KDENLLTRLQNINLCFHFEVEQQV            TAG+WRIKALE+SGGWLERTTVED
Sbjct: 133 KDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVED 192

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPM LFRLCLPA+ITSK
Sbjct: 193 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVITSK 251


>GSVIVT01032523001 assembled CDS
          Length = 662

 Score =  429 bits (1102), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/239 (83%), Positives = 216/239 (90%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY QSISAVCQLDWP++RLLIQVLDDSDDE++Q LIK EV+ W+QKGVNIIYRHR VRT
Sbjct: 213 EVYAQSISAVCQLDWPRERLLIQVLDDSDDENVQLLIKNEVSSWNQKGVNIIYRHRFVRT 272

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAGNLKSAM CDYVKDYEFVAIFDADFQPNPDFLK T+PHFK  PE+GLVQARW+FVN
Sbjct: 273 GYKAGNLKSAMACDYVKDYEFVAIFDADFQPNPDFLKQTIPHFKGNPEVGLVQARWSFVN 332

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
           KDENLLTRLQNINLCFHFEVEQQV            TAG+WRIKALEESGGWLERTTVED
Sbjct: 333 KDENLLTRLQNINLCFHFEVEQQVNGLFLEFFGFNGTAGVWRIKALEESGGWLERTTVED 392

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MDIAVRAHL+GWKFIFLNDVKV CE+PESY+AY+KQQHRWHSGPM LFRLCLPAI+TSK
Sbjct: 393 MDIAVRAHLHGWKFIFLNDVKVPCELPESYQAYKKQQHRWHSGPMQLFRLCLPAIVTSK 451


>GSVIVT01009290001 assembled CDS
          Length = 647

 Score =  395 bits (1015), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 186/239 (77%), Positives = 201/239 (84%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+QSI+A C LDWPK  +LIQVLDDSDD   Q +IK EV  W Q+G +I+YRHRV+R 
Sbjct: 202 EVYQQSIAACCNLDWPKSSILIQVLDDSDDPVTQLMIKEEVTKWQQEGAHILYRHRVIRD 261

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAGNLKSAMNC YVKDYEFVAIFDADFQP PDFLK TVPHFKD  ELGLVQARW+FVN
Sbjct: 262 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVN 321

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
           KDENLLTRLQNINL FHFEVEQQV            TAG+WRIKALE+SGGWLERTTVED
Sbjct: 322 KDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWLERTTVED 381

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MDIAVRAHL GWKFIFLNDV+  CE+PESYEAYRKQQHRWHSGPM LFRLCLP +I SK
Sbjct: 382 MDIAVRAHLQGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRSK 440


>GSVIVT01002010001 assembled CDS
          Length = 630

 Score =  359 bits (921), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/239 (74%), Positives = 201/239 (84%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+QSI+AVC  DWP++R+L+QVLDDSDD  +Q LIKAEV  W Q+G+ I+YRHR++RT
Sbjct: 238 EVYQQSIAAVCIQDWPRERMLVQVLDDSDDLDVQHLIKAEVQKWQQRGLRILYRHRLIRT 297

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAGNLKSAM+CDYVKDYEFVAIFDADFQP PDFLK T+P+FK   +L LVQ RW FVN
Sbjct: 298 GYKAGNLKSAMSCDYVKDYEFVAIFDADFQPGPDFLKKTIPYFKGNDDLALVQTRWAFVN 357

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
           KDENLLTRLQNINL FHFEVEQQV            TAG+WRIKALE+ GGWLERTTVED
Sbjct: 358 KDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTVED 417

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MD+AVRAHL GWKFI+LNDVK LCE+PESYEAY+KQQHRWHSGPM LFRLC   I+ SK
Sbjct: 418 MDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFFDILRSK 476


>GSVIVT01033767001 assembled CDS
          Length = 540

 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/239 (54%), Positives = 166/239 (69%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+ SI A C L WP DR++IQVLDDS D +I+ L++ E   W+ KG+NI Y  R  R 
Sbjct: 110 EVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRNNRN 169

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAG LK  M   YVK+ ++VAIFDADFQP PDFL  TVP     PE+ LVQARW FVN
Sbjct: 170 GYKAGALKEGMKHSYVKECDYVAIFDADFQPEPDFLWRTVPFLVHNPEIALVQARWKFVN 229

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
            DE L+TR+Q ++L +HF VEQ+V            TAG+WRI AL E+GGW +RTTVED
Sbjct: 230 SDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVED 289

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MD+AVRA L GWKF++L  +KV  E+P +++AYR QQHRW  GP +LFR  +  I+ +K
Sbjct: 290 MDLAVRASLKGWKFVYLGTLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIVRNK 348


>GSVIVT01034719001 assembled CDS
          Length = 449

 Score =  270 bits (690), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 126/229 (55%), Positives = 161/229 (70%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+ SI A C L WP +R++IQVLDDS D +I+ L++ E   W+ KG+NI Y  R  R 
Sbjct: 26  EVYQLSIGAACGLSWPSERIIIQVLDDSTDPTIKDLVEMECQRWASKGINIKYEIRGNRH 85

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAG LK  M   YVK  ++VAIFDADFQP PDFL  T+P     PE+GLVQARW FVN
Sbjct: 86  GYKAGALKEGMKHSYVKQCDYVAIFDADFQPEPDFLWRTIPFLVHNPEIGLVQARWKFVN 145

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
            DE L+TR+Q ++L +HF VEQ+V            TAG+WRI AL E+GGW +RTTVED
Sbjct: 146 SDECLMTRMQEMSLDYHFTVEQEVGSSSHAFFGFNGTAGVWRISALNEAGGWKDRTTVED 205

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFR 233
           MD+AVRA L GWKF+++  +KV  E+P +++AYR QQHRW  GP +LF+
Sbjct: 206 MDLAVRASLKGWKFVYVGALKVKNELPSTFKAYRYQQHRWSCGPANLFK 254


>GSVIVT01025737001 assembled CDS
          Length = 443

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/236 (52%), Positives = 163/236 (69%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+ SI A C + WP DR +IQVLDDS +E+++ +++ E   W  KGVN+ Y  R  R 
Sbjct: 59  EVYKLSIGAACSVSWPSDRFIIQVLDDSTNEALRVMVELECRKWIDKGVNVKYETRNNRN 118

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAG L+  +   YV+D EFVAIFDADFQP  +FL  T+P   + P LGLVQARW FVN
Sbjct: 119 GYKAGALREGLQKQYVEDCEFVAIFDADFQPEENFLWRTIPFLLENPGLGLVQARWKFVN 178

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
            DE L+TRLQ ++L +HF VEQ+V            TAG+WRI+A+ ++GGW +RTTVED
Sbjct: 179 ADECLMTRLQEMSLDYHFSVEQEVGSSTCSFFGFNGTAGVWRIQAINDAGGWKDRTTVED 238

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAII 240
           MD+AVRA L GWKF+F+ D+ V  E+P +++AYR QQHRW  GP +LFR     II
Sbjct: 239 MDLAVRASLKGWKFLFVGDLSVKNELPSTFKAYRYQQHRWSCGPANLFRKMTKEII 294


>GSVIVT01031405001 assembled CDS
          Length = 429

 Score =  266 bits (679), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 124/239 (51%), Positives = 165/239 (69%)

Query: 5   QVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQCLIKAEVAVWSQKGVNIIYRHRVVRT 64
           +VY+ SI A C L WP DRL+IQVLDDS D +I+ L++ E   W+ KG+NI Y+ R  R 
Sbjct: 6   EVYKLSIGAACGLSWPADRLVIQVLDDSTDPAIKNLVETECQRWAAKGINIRYQIRENRV 65

Query: 65  GYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLKLTVPHFKDKPELGLVQARWTFVN 124
           GYKAG L+  +   YVK  E+VAIFDADFQP PD+LK  +P      ++ LVQ RW FVN
Sbjct: 66  GYKAGALREGLKRSYVKHCEYVAIFDADFQPEPDYLKRAIPFLVYNSDIALVQGRWRFVN 125

Query: 125 KDENLLTRLQNINLCFHFEVEQQVXXXXXXXXXXXXTAGIWRIKALEESGGWLERTTVED 184
            DE L+TR+Q ++L +HF VEQ+V            TAG+WRI A+ E+GGW +RTTVED
Sbjct: 126 ADECLMTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVED 185

Query: 185 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSK 243
           MD+AVRA L GWKF++L D++V  E+P +++A+R QQHRW  GP +LFR  +  I+ +K
Sbjct: 186 MDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNK 244