Jatropha Genome Database

JcCB0381281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0381281.10 - phase: 0 /partial
         (281 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01020111001 assembled CDS                                       438   e-123
GSVIVT01008089001 assembled CDS                                       434   e-122
GSVIVT01021557001 assembled CDS                                       345   1e-95
GSVIVT01017641001 assembled CDS                                       252   2e-67
GSVIVT01011424001 assembled CDS                                       239   1e-63
GSVIVT01019973001 assembled CDS                                       232   1e-61
GSVIVT01014218001 assembled CDS                                        68   6e-12
GSVIVT01035404001 assembled CDS                                        62   2e-10
GSVIVT01037664001 assembled CDS                                        49   2e-06

>GSVIVT01020111001 assembled CDS
          Length = 640

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 197/268 (73%), Positives = 234/268 (87%), Gaps = 1/268 (0%)

Query: 15  QHHLEMFKKWQAPPLPNAQVELFIGVLSAGNHFAERMALRKSWMQHKLIRTSEVVTRFFV 74
           Q HLE   KWQA PLP+  VELFIG+LSAGNHFAERMA+RKSWMQH L+++S+VV RFF+
Sbjct: 373 QLHLEKLPKWQASPLPDGPVELFIGILSAGNHFAERMAVRKSWMQHNLVKSSKVVARFFI 432

Query: 75  ALNGRRETNMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDD 134
           AL+GR+E N+ELKKEA+YFGD VIVPYMDNYDLVVLKT+AICEYG +T AAK IMKCDDD
Sbjct: 433 ALHGRKEINVELKKEAEYFGDTVIVPYMDNYDLVVLKTVAICEYGARTAAAKYIMKCDDD 492

Query: 135 TFVRVEVMIEEIKKVPRNRSLYIGNINYLHRVLRSGKWAVTFEEWPEEVYPPYANGPGYI 194
           TFVRV+ +I+E +KV  + SLY+GN+NY H+ LR GKWAVT+EEWPEE YPPYANGPGYI
Sbjct: 493 TFVRVDAVIKEARKVHEDNSLYVGNMNYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYI 552

Query: 195 ISSDIAQFIVAEFQSQKLNLFKMEDVSMGMWVEKFNTSKPVQYVHSLNYCQSGCIEDYFT 254
           +S DIA+FIV+EF+  KL LFKMEDVSMGMWVE+FN+S PVQY+HS+ +CQ GCIEDY+T
Sbjct: 553 VSYDIAEFIVSEFEKHKLRLFKMEDVSMGMWVEQFNSSMPVQYLHSVKFCQFGCIEDYYT 612

Query: 255 AHYQSPRQMLCLWDKI-QQGNPECCNMR 281
           AHYQSPRQM+C+W+K+ QQG   CCNMR
Sbjct: 613 AHYQSPRQMICMWEKLQQQGKAHCCNMR 640


>GSVIVT01008089001 assembled CDS
          Length = 448

 Score =  434 bits (1115), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/268 (73%), Positives = 231/268 (86%), Gaps = 1/268 (0%)

Query: 15  QHHLEMFKKWQAPPLPNAQVELFIGVLSAGNHFAERMALRKSWMQHKLIRTSEVVTRFFV 74
           Q HLEM   W+AP LPN  VELFIG+LSAGNHFAERMA+RKSWMQHK IR+S VV RFFV
Sbjct: 181 QRHLEMSSIWKAPSLPNGPVELFIGILSAGNHFAERMAVRKSWMQHKFIRSSNVVARFFV 240

Query: 75  ALNGRRETNMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDD 134
           AL+ R+E N+ELKKEA+YFGDIV+VPYMDNYDLVVLKTLAI EYG+ TV+AK IMKCDDD
Sbjct: 241 ALHARKEVNVELKKEAEYFGDIVMVPYMDNYDLVVLKTLAISEYGVHTVSAKYIMKCDDD 300

Query: 135 TFVRVEVMIEEIKKVPRNRSLYIGNINYLHRVLRSGKWAVTFEEWPEEVYPPYANGPGYI 194
           TFVRV+ +++E +KVP   SLY+GN+NY H+ LR GKWAVT+EEWPEE YPPYANGPGYI
Sbjct: 301 TFVRVDAVLDEARKVPDGSSLYVGNMNYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYI 360

Query: 195 ISSDIAQFIVAEFQSQKLNLFKMEDVSMGMWVEKFNTSKPVQYVHSLNYCQSGCIEDYFT 254
           +S D+A FIV EF+  KL LFKMEDVSMGMWV +FN+S+ V+Y HSL +CQ GCIE+Y+T
Sbjct: 361 LSYDVAHFIVNEFEKHKLRLFKMEDVSMGMWVGQFNSSRSVEYRHSLKFCQFGCIEEYYT 420

Query: 255 AHYQSPRQMLCLWDKIQQ-GNPECCNMR 281
           AHYQSPRQM+CLW+K+QQ G P+CCNMR
Sbjct: 421 AHYQSPRQMICLWEKLQQNGRPQCCNMR 448


>GSVIVT01021557001 assembled CDS
          Length = 224

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 154/224 (68%), Positives = 188/224 (83%)

Query: 58  MQHKLIRTSEVVTRFFVALNGRRETNMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICE 117
           MQ   I++S VV RFFVALN R+E N  +KKEA YFGDI+I+P+MD Y+LVVLKT+AICE
Sbjct: 1   MQSSAIKSSNVVVRFFVALNPRKEVNAIMKKEAAYFGDIIILPFMDRYELVVLKTIAICE 60

Query: 118 YGIQTVAAKNIMKCDDDTFVRVEVMIEEIKKVPRNRSLYIGNINYLHRVLRSGKWAVTFE 177
           +G+Q V A  +MKCDDDTFVRV+ +++EI+ + R RSLY+GN+N LHR LRSGKWAVT+E
Sbjct: 61  FGVQNVTAAYVMKCDDDTFVRVDTVLKEIEGISRKRSLYMGNLNLLHRPLRSGKWAVTYE 120

Query: 178 EWPEEVYPPYANGPGYIISSDIAQFIVAEFQSQKLNLFKMEDVSMGMWVEKFNTSKPVQY 237
           EWPEEVYPPYANGPGYIIS DIA+FIVA+  ++ L LFKMEDVSMGMWVE+FN+S PVQY
Sbjct: 121 EWPEEVYPPYANGPGYIISIDIAKFIVAQHGNRSLRLFKMEDVSMGMWVEQFNSSTPVQY 180

Query: 238 VHSLNYCQSGCIEDYFTAHYQSPRQMLCLWDKIQQGNPECCNMR 281
            H+  +CQ GC+EDY+TAHYQSPRQM+CLWDK+ +G   CCN R
Sbjct: 181 SHNWKFCQYGCMEDYYTAHYQSPRQMICLWDKLARGRVHCCNFR 224


>GSVIVT01017641001 assembled CDS
          Length = 637

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 116/259 (44%), Positives = 176/259 (67%), Gaps = 7/259 (2%)

Query: 25  QAPPLPNAQVELFIGVLSAGNHFAERMALRKSWMQHKLIRTSEVVTRFFVALNGRRETNM 84
           +APP+   ++ + +GV S GN+F  RMALR++WMQ++ +R+ +V  RFF+ L+  R+ N+
Sbjct: 380 KAPPVSRKRLVMLVGVFSTGNNFERRMALRRTWMQYEAVRSGDVAVRFFIGLHKNRQVNL 439

Query: 85  ELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDDTFVRVEVMIE 144
           EL +EA  +GDI ++P++D Y L+ LKT+A C  G + + AK +MK DDD FVR++ ++ 
Sbjct: 440 ELWREAQAYGDIQLMPFVDYYSLISLKTIATCIMGTKILPAKYVMKTDDDAFVRIDEVLS 499

Query: 145 EIKKVPRNRSLYIGNINY---LHRVLRSGKWAVTFEEWPEEVYPPYANGPGYIISSDIAQ 201
            +K  P N  LY G I++    HR  +  KW ++ EEWP + YPP+A+GPGYIIS DIA+
Sbjct: 500 SLKGKPSNGLLY-GLISFDSAPHRD-KDSKWHISAEEWPRDTYPPWAHGPGYIISRDIAK 557

Query: 202 FIVAEFQSQKLNLFKMEDVSMGMWVEKF-NTSKPVQYVHSLNYCQSGCIEDYFTAHYQSP 260
           FIV   Q + L LFK+EDV+MG+W+++F N  + V Y+    +  +GC  +Y  AHYQ P
Sbjct: 558 FIVQGHQERDLQLFKLEDVAMGIWIDEFKNKDQQVNYISDERFYNTGCESNYILAHYQGP 617

Query: 261 RQMLCLWDKIQ-QGNPECC 278
           R++LCLW+ +Q +  P CC
Sbjct: 618 RKVLCLWEMLQKEQKPICC 636


>GSVIVT01011424001 assembled CDS
          Length = 635

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/271 (42%), Positives = 167/271 (61%), Gaps = 4/271 (1%)

Query: 15  QHHLEMFKKWQAPPLPNAQVELFIGVLSAGNHFAERMALRKSWMQHKLIRTSEVVTRFFV 74
           +H +++      P  P   V+LFIGV S  N+F  RMA+R++WMQ+  +R+  V  RFFV
Sbjct: 365 EHIVDLETLRSVPVRPRQPVDLFIGVFSTANNFKRRMAVRRTWMQYLAVRSGAVAVRFFV 424

Query: 75  ALNGRRETNMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDD 134
            L+  +  N EL KE   +GDI ++P++D Y L+  KT+AIC +G + V+AK +MK DDD
Sbjct: 425 GLHKNQMVNEELWKEVQTYGDIQLMPFVDYYSLITWKTIAICIFGTEAVSAKYVMKTDDD 484

Query: 135 TFVRVEVMIEEIKKVPRNRSLYIGNINYLHRVLRS--GKWAVTFEEWPEEVYPPYANGPG 192
           +FVRV+ ++  +KK      L  G IN   R  RS   KW ++ EEW  E YPP+A+GPG
Sbjct: 485 SFVRVDEVLASLKKTKVTHGLLYGLINSDARPHRSSDSKWYISPEEWAGETYPPWAHGPG 544

Query: 193 YIISSDIAQFIVAEFQSQKLNLFKMEDVSMGMWVEKFNTSK-PVQYVHSLNYCQSGCIED 251
           Y++S+DIA+ +    +   L +FK+EDV+MG+W+ +       V Y+        GC + 
Sbjct: 545 YVVSNDIAKTVYKRHKEGHLKMFKLEDVAMGIWIAEMKKGGMEVSYIKEERVYNEGCNDG 604

Query: 252 YFTAHYQSPRQMLCLWDKIQQGN-PECCNMR 281
           Y  AHYQSPR+MLCLW K+Q GN  +CC  R
Sbjct: 605 YVVAHYQSPREMLCLWQKLQLGNGAKCCGNR 635


>GSVIVT01019973001 assembled CDS
          Length = 636

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 164/266 (61%), Gaps = 6/266 (2%)

Query: 18  LEMFKKWQAPPLPNAQVELFIGVLSAGNHFAERMALRKSWMQHKLIRTSEVVTRFFVALN 77
           LE  K    P LP  ++ELFIGV S  N+F  RMA+R++WMQ+  +R+  V  RFFV L+
Sbjct: 371 LEALK--SVPLLPEKRLELFIGVFSTANNFKRRMAVRRTWMQYAAVRSGAVAVRFFVGLH 428

Query: 78  GRRETNMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDDTFV 137
             +  N EL  EA  +GD  ++P++D Y ++  K LAIC +G + V+AK +MK DDD FV
Sbjct: 429 KNKMVNEELWNEARTYGDTQLMPFVDYYSIITWKALAICIFGTEVVSAKFVMKTDDDAFV 488

Query: 138 RVEVMIEEIKKVPRNRSLYIGNINYLHRVLRS--GKWAVTFEEWPEEVYPPYANGPGYII 195
           RV+ ++  + ++  +  L  G IN   R  R+   KW ++ EEWPEE YPP+A+GPGY++
Sbjct: 489 RVDEVLASLNRINVSHGLLYGLINSDSRPHRNTESKWYISPEEWPEETYPPWAHGPGYVV 548

Query: 196 SSDIAQFIVAEFQSQKLNLFKMEDVSMGMWVEKFNTSK-PVQYVHSLNYCQSGCIEDYFT 254
           S DIA+ +   ++  +L +FK+EDV+MG+W+         V Y         GC + Y  
Sbjct: 549 SHDIAKQVYKRYKKGRLKMFKLEDVAMGIWIADMKKGGMEVWYEKEERVYNEGCKDGYVV 608

Query: 255 AHYQSPRQMLCLWDKIQQGN-PECCN 279
           AHYQ+PR+MLCLW K+Q+    +CC 
Sbjct: 609 AHYQAPREMLCLWQKLQEKKRAQCCG 634


>GSVIVT01014218001 assembled CDS
          Length = 258

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)

Query: 37  FIGVLSAGNHFAERMALRKSWMQ------HKLIRTSEVVTRFFVALNGRRETNMELKKEA 90
           F+G+ +       R +LRKSWM        +L   + +  RF +     R    EL+KE 
Sbjct: 3   FVGIQTGFGSVGRRRSLRKSWMPADRQGLQRLEDATGLAFRFVIGRTNDRAKMAELRKEV 62

Query: 91  DYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDDTFVRVEVMIEEIKKVP 150
             + D +++   + Y  +  KTLA  +       ++  +K DDD ++R + +   + K  
Sbjct: 63  AQYDDFMLLDIEEEYSKLPYKTLAFFKAAYALFDSEFYVKADDDIYLRPDRLSLLLAKER 122

Query: 151 RNRSLYIGNINYLHRVLRSG--------KWAVTFEEWPEEVYPPYANGPGYIISSDIAQF 202
            +   Y+G        ++ G        KW           Y  +A GP Y +S+D+   
Sbjct: 123 SHSQTYLG-------CMKKGPVFTDPKLKWYEPLSYMLGNEYFLHAYGPIYALSADVVAS 175

Query: 203 IVAEFQSQKLNLFKMEDVSMGMWVEKFNTS 232
           +VA  ++    +F  EDV++G W+   N +
Sbjct: 176 LVA-LRNNSFRMFSNEDVTIGAWMLAMNVN 204


>GSVIVT01035404001 assembled CDS
          Length = 361

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 8/209 (3%)

Query: 29  LPNAQVELFIGVLSAGNHFAERMALRKSWMQH------KLIRTSEVVTRFFVALNGRRET 82
           L   +V  F+G+ +  +  + R ALR +W         +L + + +  RF +  +   + 
Sbjct: 97  LDRPKVLGFVGIQTGFSSASRRSALRSTWFPSDPDGLLRLEQATGLAFRFVIGRSKDVKK 156

Query: 83  NMELKKEADYFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDDTFVRVEVM 142
             EL+KE + + D +++   + Y  +  KTLA  +   +   A   +K DDD ++R + +
Sbjct: 157 MAELQKEVEKYKDFMLIDVREEYLNLPHKTLAFFKAAFELFDADYYVKADDDIYLRPDRL 216

Query: 143 IEEIKKVPRNRSLYIGNINYLHRVLRSG-KWAVTFEEWPEEVYPPYANGPGYIISSDIAQ 201
              + K   +   YIG +     +     KW           Y  +A GP Y++S ++  
Sbjct: 217 STLLAKERSHSQTYIGCMKKGPVITDPKMKWYEKSGHLIGNEYFLHAYGPIYVLSKEVVA 276

Query: 202 FIVAEFQSQKLNLFKMEDVSMGMWVEKFN 230
            + A  ++  L +F  EDV++G W+   N
Sbjct: 277 SLAAA-RNNSLRMFNNEDVTIGSWMLAMN 304


>GSVIVT01037664001 assembled CDS
          Length = 405

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 13/201 (6%)

Query: 36  LFIGVLSAGNHFAERMALRKSWM-----QHKLIRTSEVVTRFFVALNGRRETNMELKKEA 90
           + IG+ +A +    R ++R +WM     + KL     ++ RF +  +      ++   EA
Sbjct: 138 MVIGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIIVRFVIGHSATSGGILDRAIEA 197

Query: 91  D--YFGDIVIVPYMDNYDLVVLKTLAICEYGIQTVAAKNIMKCDDDTFVRVEVMIEEIKK 148
           +    GD + + +++ Y  +  KT A     +    A   +K DDD  V +  +   + +
Sbjct: 198 EDRRHGDFLRLEHVEGYLELSAKTKAYFATAVAMWDADFYVKVDDDVHVNIATLGATLAR 257

Query: 149 VPRNRSLYIGNINYLHRVLRSGKWAVTFEEWP--EE--VYPPYANGPGYIISSDIAQFIV 204
                 +YIG +     + + G      E W   EE   Y  +A G  Y IS D+A +I 
Sbjct: 258 HRSKPRIYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLATYI- 316

Query: 205 AEFQSQKLNLFKMEDVSMGMW 225
                  L+ +  EDVS+G W
Sbjct: 317 -SINQHVLHKYANEDVSLGSW 336