Jatropha Genome Database

JcCB0380761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0380761.10 + phase: 1 /partial
         (409 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01037549001 assembled CDS                                       625   e-179
GSVIVT01025883001 assembled CDS                                       623   e-179
GSVIVT01025879001 assembled CDS                                       583   e-167
GSVIVT01025282001 assembled CDS                                       196   2e-50
GSVIVT01025881001 assembled CDS                                       182   2e-46

>GSVIVT01037549001 assembled CDS
          Length = 1219

 Score =  625 bits (1611), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 285/379 (75%), Positives = 340/379 (89%)

Query: 31   QIKLGSQYYFYMENQTALAVPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRR 90
            +IKLGSQYYFYME QTALA+PDEDNC+VVYSS Q PEYAH+ I++CLG+PEHNVRV+TRR
Sbjct: 622  EIKLGSQYYFYMETQTALAIPDEDNCIVVYSSIQCPEYAHSTISRCLGIPEHNVRVITRR 681

Query: 91   VGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKITYSVGFKSN 150
            VGGGFGGKA++AMPVATACALAA+KL+RPVR+Y+NR TDMI+ GGRHPMKITYSVGFKS+
Sbjct: 682  VGGGFGGKAIRAMPVATACALAAYKLRRPVRIYMNRKTDMIIAGGRHPMKITYSVGFKSD 741

Query: 151  GKITALKLDILINAGISIDVSPVMPKAIVSALKKYDWGALSFDIKVCKTNVVSKSAMRAP 210
            GKITAL LDILINAGI+ D+SP+MP  ++ ALKKYDWGALSFDIKVCKTN  +KSAMRAP
Sbjct: 742  GKITALHLDILINAGIAADISPIMPHNLLGALKKYDWGALSFDIKVCKTNHSTKSAMRAP 801

Query: 211  GDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYDLSAGEPLEYTLTSIWNK 270
            G+VQ ++I+EA+IE+VA+ L +  DSVR+ NLHT+N+LK +Y+ SAGEP++YTL SIW+K
Sbjct: 802  GEVQATFISEAVIEHVASTLSMDVDSVRSKNLHTFNSLKFFYEGSAGEPVDYTLPSIWDK 861

Query: 271  LATSSSFEQRTELIKEFNRSNVWKKRGISRIPVVYEVGTRPTAGKVSILNDGSIVVEVGG 330
            LA+SS  +QRTE+IK+FN  N W+KRGIS++P+V+EV  RPT GKVSIL+DGS+ VEVGG
Sbjct: 862  LASSSRLKQRTEMIKQFNMCNKWQKRGISQVPIVHEVSLRPTPGKVSILSDGSVAVEVGG 921

Query: 331  LEIGQGLWTKVKQMVAFALSSIKCDGAGDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSC 390
            +E+GQGLWTKVKQM AFALSSI+CDG GD L+KVRVIQSDTLSL QGG TAGSTTSESSC
Sbjct: 922  IELGQGLWTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGFTAGSTTSESSC 981

Query: 391  EAVRLCCNVLVERLMAVKE 409
            EA+RLCCN+LVERL   KE
Sbjct: 982  EAIRLCCNILVERLTPTKE 1000


>GSVIVT01025883001 assembled CDS
          Length = 771

 Score =  623 bits (1606), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 284/379 (74%), Positives = 337/379 (88%)

Query: 31  QIKLGSQYYFYMENQTALAVPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRR 90
           +IKLGSQYYFYME QTALAVPDEDNC+VVYS+ Q PEYAH  IA+CLG+PEHNVRV+TRR
Sbjct: 179 EIKLGSQYYFYMETQTALAVPDEDNCIVVYSAIQCPEYAHGAIARCLGIPEHNVRVITRR 238

Query: 91  VGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKITYSVGFKSN 150
           VGGGFGGKA++AMPVATACALAA+KL RPVR+Y+N  TDMI+ GGRHPMK+TYSVGFKS+
Sbjct: 239 VGGGFGGKAIRAMPVATACALAAYKLHRPVRIYMNHKTDMIIAGGRHPMKVTYSVGFKSD 298

Query: 151 GKITALKLDILINAGISIDVSPVMPKAIVSALKKYDWGALSFDIKVCKTNVVSKSAMRAP 210
           GKITAL LDILINAGI++DVSPVMP+ ++ ALK YDWGALSFDIK+CKTN  SKSAMRAP
Sbjct: 299 GKITALHLDILINAGIAVDVSPVMPQHMLGALKNYDWGALSFDIKLCKTNHSSKSAMRAP 358

Query: 211 GDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYDLSAGEPLEYTLTSIWNK 270
           G+ Q  +I+EA+IE++A+ L +  DSVR  NLHT+N+L  +++ SAGEP EYTL SIW+K
Sbjct: 359 GEAQAIFISEAVIEHIASTLSVDVDSVRIKNLHTFNSLIFFFEGSAGEPFEYTLPSIWDK 418

Query: 271 LATSSSFEQRTELIKEFNRSNVWKKRGISRIPVVYEVGTRPTAGKVSILNDGSIVVEVGG 330
           LATSSSF++RTE IK+FN  N W+KRGISR+P+V+EV  RPT GKVSIL+DGS+ VEVGG
Sbjct: 419 LATSSSFKERTEKIKQFNMCNKWRKRGISRVPIVHEVSLRPTPGKVSILSDGSVAVEVGG 478

Query: 331 LEIGQGLWTKVKQMVAFALSSIKCDGAGDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSC 390
           +E+GQGLWTKVKQM AFALSSI+CDG GD L+KVRVIQSDTLSL QGG+TAGSTTSES+C
Sbjct: 479 IELGQGLWTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSESTC 538

Query: 391 EAVRLCCNVLVERLMAVKE 409
           EA+RLCCN+LVERL+ +KE
Sbjct: 539 EAIRLCCNMLVERLIPIKE 557


>GSVIVT01025879001 assembled CDS
          Length = 1380

 Score =  583 bits (1503), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 281/412 (68%), Positives = 341/412 (82%), Gaps = 14/412 (3%)

Query: 12   REWLKQIPRFYLPRLNYDI--------------QIKLGSQYYFYMENQTALAVPDEDNCM 57
            R    ++P F  P+   D               +I+LGSQYYFYME QTALA+PDEDNC+
Sbjct: 732  RSSFFEVPSFISPKQVGDFSRGMAKADHKILSAEIRLGSQYYFYMETQTALAIPDEDNCI 791

Query: 58   VVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRRVGGGFGGKALKAMPVATACALAAHKLQ 117
            VVYSS Q PE AHT I++CLG+PEHNVRV+TRRVGGGFGGK++KA+ VATACALAA+KLQ
Sbjct: 792  VVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGGKSMKAIAVATACALAAYKLQ 851

Query: 118  RPVRVYLNRHTDMIMVGGRHPMKITYSVGFKSNGKITALKLDILINAGISIDVSPVMPKA 177
            RPVR+Y+NR TDM + GGRHPMK+TYSVGFKSNGKITAL +DILINAGI +D+SP+MP  
Sbjct: 852  RPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALHVDILINAGIGVDISPIMPML 911

Query: 178  IVSALKKYDWGALSFDIKVCKTNVVSKSAMRAPGDVQGSYIAEAIIENVAAFLFISSDSV 237
            +V ALKKYDWGA SFDIKVCKTN +SKSAMRAPG+VQ ++I+EA+IE+VA+ L +  DSV
Sbjct: 912  MVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATFISEAVIEHVASTLSMDVDSV 971

Query: 238  RAINLHTYNTLKLYYDLSAGEPLEYTLTSIWNKLATSSSFEQRTELIKEFNRSNVWKKRG 297
            R+ NLHT+N+L  +++  AGE +EYTL  IW+KLATSSSF++RT++IK+FN  N W+KRG
Sbjct: 972  RSRNLHTFNSLNFFFEGCAGEHVEYTLPLIWDKLATSSSFKERTDMIKQFNMCNKWQKRG 1031

Query: 298  ISRIPVVYEVGTRPTAGKVSILNDGSIVVEVGGLEIGQGLWTKVKQMVAFALSSIKCDGA 357
            ISR+P+V+EV  + T GKVSIL+DGS+ VEVGG+E+GQGLWTKVKQM AFAL SI CDG 
Sbjct: 1032 ISRVPIVHEVSLKATPGKVSILSDGSVAVEVGGIELGQGLWTKVKQMTAFALISIGCDGM 1091

Query: 358  GDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSCEAVRLCCNVLVERLMAVKE 409
            GD L+KVRVIQSDTLSL QGG+TAGSTTSE SCEA+RLCCN+LVERL  +KE
Sbjct: 1092 GDFLEKVRVIQSDTLSLIQGGLTAGSTTSECSCEAIRLCCNMLVERLNPIKE 1143


>GSVIVT01025282001 assembled CDS
          Length = 1301

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 198/385 (51%), Gaps = 21/385 (5%)

Query: 31   QIKLGSQYYFYMENQTALA-VPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTR 89
            ++ +G Q +FY+E  ++L    D  N + + SS Q P+     ++  LG+P   V   T+
Sbjct: 702  EVHVGGQEHFYLETNSSLVWTTDSGNEVHMISSTQCPQKHQKYVSHVLGLPMSKVVCKTK 761

Query: 90   RVGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKITYSVGFKS 149
            R+GGGFGGK  ++   A    + ++ L RPV++ L+R  DM++ G RH     Y VGF +
Sbjct: 762  RIGGGFGGKETRSACFAAVACVPSYLLNRPVKLTLDRDIDMMISGQRHTFLGKYKVGFTN 821

Query: 150  NGKITALKLDILINAGISIDVS-PVMPKAIVSALKKYDWGALSFDIKVCKTNVVSKSAMR 208
            +GK+ AL L+I  N G S+D+S  V+ +A+  +   YD   +  + KVC TN  S +A R
Sbjct: 822  DGKVQALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYDIPNVRINGKVCLTNFPSHTAFR 881

Query: 209  APGDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYDLSAGEPLE-YTLTSI 267
              G  QG  I E  I+ +A  L  S + +R IN  +   +  Y     G+ L+ +TL  +
Sbjct: 882  GFGGPQGMLITENWIQRIATELKKSPEEIREINFQSEGCVTHY-----GQQLQHFTLPRV 936

Query: 268  WNKLATSSSFEQRTELIKEFNRSNVWKKRGISRIPVVYEVG-----TRPTAGKVSILNDG 322
            WN+L +S  F +    + +FN  N WKKRG++ +P  + +             V +  DG
Sbjct: 937  WNELKSSCEFLKARGEVDQFNLQNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDG 996

Query: 323  SIVVEVGGLEIGQGLWTKVKQMVAFALSSIKCDGAGDLLDKVRVIQSDTLSLTQGGMTAG 382
            +++V  GG+E+GQGL TKV Q+ A + +          L  V + ++ T  +     TA 
Sbjct: 997  TVLVTHGGVEMGQGLHTKVAQVAASSFNIP--------LSSVFISETSTDKVPNSTPTAA 1048

Query: 383  STTSESSCEAVRLCCNVLVERLMAV 407
            S +S+    AV   C  +  R+  +
Sbjct: 1049 SASSDMYGAAVLDACEQIKARMEPI 1073


>GSVIVT01025881001 assembled CDS
          Length = 1096

 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/111 (79%), Positives = 102/111 (91%)

Query: 31  QIKLGSQYYFYMENQTALAVPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRR 90
           +I+LGSQYYFYME QTALAVPDEDNC+VVYSS Q PE AHT I++CLG+PEHNVRV+TRR
Sbjct: 677 EIRLGSQYYFYMETQTALAVPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRR 736

Query: 91  VGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKI 141
           VGGGFGGKA+KA+ VATACALAA+KLQRPVR+Y+NR TDM + GGRHPMK+
Sbjct: 737 VGGGFGGKAMKAIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKV 787



 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 46/55 (83%)

Query: 355 DGAGDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSCEAVRLCCNVLVERLMAVKE 409
           +G  D L+KVRVIQSDTLSL QGG+T  STTSE SCEA+RLCCN+LV+RL  +KE
Sbjct: 827 EGCADFLEKVRVIQSDTLSLIQGGLTTASTTSECSCEAIRLCCNMLVKRLTPIKE 881



 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 208 RAPGDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYD 253
           R P  VQ ++I+EA+IE+VA+ L +  DSVR+ NLHT+N+L  +++
Sbjct: 782 RHPMKVQATFISEAVIEHVASTLSMDVDSVRSGNLHTFNSLNFFFE 827