Jatropha Genome Database

JcCB0375591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0375591.10 + phase: 0 /pseudo
         (490 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01015018001 assembled CDS                                       809   0.0  
GSVIVT01028043001 assembled CDS                                       697   0.0  
GSVIVT01035106001 assembled CDS                                       678   0.0  
GSVIVT01029388001 assembled CDS                                       502   e-142
GSVIVT01035210001 assembled CDS                                       486   e-137

>GSVIVT01015018001 assembled CDS
          Length = 806

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/486 (80%), Positives = 421/486 (86%)

Query: 1   MAERVITRVHSIRERLDETLKAHRNEIVALLSRIEAKGKGILQHHHIIAEFEAIPEENRK 60
           MA+ V+T VHS+R R+DETL AHRNEI++ LSRIE  GKGILQ H ++AEFEA+PE NRK
Sbjct: 1   MADGVLTGVHSLRARVDETLTAHRNEILSFLSRIEGHGKGILQPHQLLAEFEALPEVNRK 60

Query: 61  ILLDGVFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVAEYLHFKE 120
            L DG FG++L+S QEAIVLPPW+A AVRPRPGVWEYIRVNV ALVVEEL V EYLHFKE
Sbjct: 61  KLSDGPFGDILKSIQEAIVLPPWIAFAVRPRPGVWEYIRVNVSALVVEELLVPEYLHFKE 120

Query: 121 ELVDGSNNGNFVLELDFEPFNASFPRPTLSKYIGNGVEFLNRHLSAKLFHDKESLHPLLE 180
           ELVDGS NGNFVLELDFEPF AS PRPTLSK IGNGVEFLNRHLSAK+FHDK+S+ PLL+
Sbjct: 121 ELVDGSCNGNFVLELDFEPFTASVPRPTLSKSIGNGVEFLNRHLSAKMFHDKDSMQPLLD 180

Query: 181 FLKVHCHKGKNMMLNDRIQNLNSLQYVLRKAEEYLTSLPSETPYSEFEHKFQEIGLERGW 240
           FL+ H +KGK MMLNDRIQNL++LQ+VLRKAEEYL+S   ETPY EFEHKFQEIGLERGW
Sbjct: 181 FLRTHQYKGKTMMLNDRIQNLDTLQFVLRKAEEYLSSQAPETPYPEFEHKFQEIGLERGW 240

Query: 241 GDTAERVLEMIRXXXXXXEAPDPCTLETFLGRIPMVFNVVIMSPHGYFAQDNVLGYPDTG 300
           GDTAERVLEMI       EAPDPCTLE FLGRIPMVFNVVI+SPHGYFAQDNVLGYPDTG
Sbjct: 241 GDTAERVLEMIHLLLDLLEAPDPCTLEQFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTG 300

Query: 301 GQVVYILDQVRALEEEMLHRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRLEKVFGTEHS 360
           GQVVYILDQVRA+E EML RIKQQG                AVGTTC QR+EKV+GTEHS
Sbjct: 301 GQVVYILDQVRAMETEMLLRIKQQGLDITPKIIIVTRLLPDAVGTTCNQRIEKVYGTEHS 360

Query: 361 DILRIPFRTEKGIVRKWISRFEVWPYLETYTEDVATEIGKELQGKPDLIIGNYSDGNIVA 420
            ILR+PFRTEKGIVRKWISRFEVWPYLETYTEDVA E+  ELQ KPD IIGNYSDGNIVA
Sbjct: 361 IILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAKELATELQTKPDFIIGNYSDGNIVA 420

Query: 421 SLLAHKLGVTECTIAHALEKTKYPESDIYWKKFDEKYHFSCQFTADLFAMNHTDFIITST 480
           SLLAHKLGVT+CTIAHALEKTKYPESDIYWKK ++KYHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEDKYHFSCQFTADLIAMNHTDFIITST 480

Query: 481 FQEIAG 486
           FQEIAG
Sbjct: 481 FQEIAG 486


>GSVIVT01028043001 assembled CDS
          Length = 811

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/488 (68%), Positives = 397/488 (81%), Gaps = 2/488 (0%)

Query: 1   MAERVITRVHSIRERLDETLKAHRNEIVALLSRIEAKGKGILQHHHIIAEFEAIPEEN-- 58
           M    + R  SIR+R+++TL AHRNE+VALLSR  A+G GILQ HH+I E + I  ++  
Sbjct: 1   MVTPKLGRSPSIRDRVEDTLSAHRNELVALLSRYVAQGNGILQPHHLIDELDNIVGDDVG 60

Query: 59  RKILLDGVFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVAEYLHF 118
           R+ L DG FG++L+S QEAI+LPP+VA+AVRPRPGVWEY+RVNVH L V++L V+EYL F
Sbjct: 61  RQKLSDGPFGQILKSTQEAIILPPFVAIAVRPRPGVWEYVRVNVHELSVDQLSVSEYLRF 120

Query: 119 KEELVDGSNNGNFVLELDFEPFNASFPRPTLSKYIGNGVEFLNRHLSAKLFHDKESLHPL 178
           KEELVDG  N  +VLELDFEPFNASFPRP  S  IGNGV+FLNRHLS+ +F +KESL PL
Sbjct: 121 KEELVDGMFNDYYVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSIMFRNKESLEPL 180

Query: 179 LEFLKVHCHKGKNMMLNDRIQNLNSLQYVLRKAEEYLTSLPSETPYSEFEHKFQEIGLER 238
           L+FL+VH +KG+ +MLNDRIQ+++ LQ  L KA+++LT LP ETP+ EFE++FQ +G ER
Sbjct: 181 LDFLRVHKYKGQVIMLNDRIQSISRLQSALVKADDHLTKLPPETPFGEFEYEFQGMGFER 240

Query: 239 GWGDTAERVLEMIRXXXXXXEAPDPCTLETFLGRIPMVFNVVIMSPHGYFAQDNVLGYPD 298
           GWGDTA+RVLEMI       +APDP TLETFLGRIPMVFNVVI+SPHGYF Q NVLG PD
Sbjct: 241 GWGDTAQRVLEMIHLLLDILQAPDPSTLETFLGRIPMVFNVVILSPHGYFGQANVLGLPD 300

Query: 299 TGGQVVYILDQVRALEEEMLHRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRLEKVFGTE 358
           TGGQVVYILDQVRALE EML R+++QG                A GTTC QRLE+V GTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRMQKQGLDVTPRILIVTRLIPDAKGTTCNQRLERVSGTE 360

Query: 359 HSDILRIPFRTEKGIVRKWISRFEVWPYLETYTEDVATEIGKELQGKPDLIIGNYSDGNI 418
           HS ILR+PFRT+KGI+RKWISRF+VWPYLET+ ED A+EI  ELQG P+LIIGNYSDGN+
Sbjct: 361 HSHILRVPFRTDKGILRKWISRFDVWPYLETFAEDAASEIAAELQGVPELIIGNYSDGNL 420

Query: 419 VASLLAHKLGVTECTIAHALEKTKYPESDIYWKKFDEKYHFSCQFTADLFAMNHTDFIIT 478
           VASLLA KLGVT+CTIAHALEKTKYP+SDIYWK FD+KYHFSCQFTADL AMN+ DFIIT
Sbjct: 421 VASLLASKLGVTQCTIAHALEKTKYPDSDIYWKNFDDKYHFSCQFTADLIAMNNADFIIT 480

Query: 479 STFQEIAG 486
           ST+QEIAG
Sbjct: 481 STYQEIAG 488


>GSVIVT01035106001 assembled CDS
          Length = 808

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/479 (67%), Positives = 383/479 (79%), Gaps = 2/479 (0%)

Query: 10  HSIRERLDETLKAHRNEIVALLSRIEAKGKGILQHHHIIAEFEAI--PEENRKILLDGVF 67
            S+RER  ETL AHRNE+V+L +   A+GKGILQ HH+I E + +   +E  + L D  F
Sbjct: 8   QSMRERFQETLSAHRNELVSLFTGYVAQGKGILQPHHMIDELDKVVGKDEGMQKLRDSPF 67

Query: 68  GEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVAEYLHFKEELVDGSN 127
            +VL+SAQEAIVLPP+VA+A+RPRPGVWEYIRVNV+ L V++L V+EYL FKEELVDG  
Sbjct: 68  SKVLKSAQEAIVLPPFVAIAIRPRPGVWEYIRVNVYELNVDQLSVSEYLQFKEELVDGQI 127

Query: 128 NGNFVLELDFEPFNASFPRPTLSKYIGNGVEFLNRHLSAKLFHDKESLHPLLEFLKVHCH 187
            GN+VLELDFEPFNA+FPRPT S  IGNGV+FLNRHLS+ +F +KESL PLL+FL+ H H
Sbjct: 128 KGNYVLELDFEPFNATFPRPTRSSSIGNGVQFLNRHLSSIMFRNKESLEPLLDFLRAHKH 187

Query: 188 KGKNMMLNDRIQNLNSLQYVLRKAEEYLTSLPSETPYSEFEHKFQEIGLERGWGDTAERV 247
            G  MMLNDRIQN++ LQ  L +AEEYL+ LP  TPYSEFE + Q +G E+GWGDTA+RV
Sbjct: 188 DGHVMMLNDRIQNISRLQSALARAEEYLSKLPPLTPYSEFEFELQGMGFEKGWGDTAQRV 247

Query: 248 LEMIRXXXXXXEAPDPCTLETFLGRIPMVFNVVIMSPHGYFAQDNVLGYPDTGGQVVYIL 307
            EM+       +APDP TLETFLGRIPMVFNVVI+SPHGYF Q NVLG PDTGGQ+VYIL
Sbjct: 248 SEMVHLLLEILQAPDPSTLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQIVYIL 307

Query: 308 DQVRALEEEMLHRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRLEKVFGTEHSDILRIPF 367
           DQVRALE EML RI++QG                A GTTC QRLE++ GTEH+ ILR+PF
Sbjct: 308 DQVRALENEMLLRIQKQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPF 367

Query: 368 RTEKGIVRKWISRFEVWPYLETYTEDVATEIGKELQGKPDLIIGNYSDGNIVASLLAHKL 427
           RTE GI+RKWISRF+VWPYLET+ ED + EI  ELQG PDLIIGNYSDGN+VASLL++K+
Sbjct: 368 RTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVASLLSYKM 427

Query: 428 GVTECTIAHALEKTKYPESDIYWKKFDEKYHFSCQFTADLFAMNHTDFIITSTFQEIAG 486
           G+T+C IAHALEKTKYPESDIYW+KF++KYHFS QFTADL AMN+ DFIITST+QEIAG
Sbjct: 428 GITQCNIAHALEKTKYPESDIYWRKFEDKYHFSSQFTADLIAMNNADFIITSTYQEIAG 486


>GSVIVT01029388001 assembled CDS
          Length = 906

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/484 (48%), Positives = 332/484 (68%), Gaps = 3/484 (0%)

Query: 6   ITRVHSIRERLDETLKAHRNEIVALLSRIEAKGKGILQHHHIIAEFEAIPEEN--RKILL 63
           + +   I + + + LK  R  +    +R    G+ ++++ HI+ E E   E+   R  ++
Sbjct: 8   VIKQQDIADTMPDALKQSRYHMKRCFARFVGSGRRLMKYRHIMEEIEKSIEDKAERSRVM 67

Query: 64  DGVFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVAEYLHFKEELV 123
           DG+ G +L + QEA V+PP+VA AVRP PG+WE+++V+   L V+ +  AEYL FKE + 
Sbjct: 68  DGLLGYILNTTQEAAVVPPYVAFAVRPSPGLWEFVKVSADDLGVDGITSAEYLKFKETIF 127

Query: 124 DGS-NNGNFVLELDFEPFNASFPRPTLSKYIGNGVEFLNRHLSAKLFHDKESLHPLLEFL 182
           D +       LE+DF  F+ S P  TL+  IGNG+ ++++ +++KL    E+  PL+E+L
Sbjct: 128 DENWATDENTLEIDFGAFDYSTPHLTLNSSIGNGLNYVSKFMTSKLSGSSENAKPLVEYL 187

Query: 183 KVHCHKGKNMMLNDRIQNLNSLQYVLRKAEEYLTSLPSETPYSEFEHKFQEIGLERGWGD 242
               H+G+++M+N+ +  ++ LQ  L  AE +++SLP +TPY  FE + ++ G E+GWGD
Sbjct: 188 LAMNHQGESLMINEMLNTVSKLQTALIVAEVFVSSLPKDTPYQSFEQRLKDWGFEKGWGD 247

Query: 243 TAERVLEMIRXXXXXXEAPDPCTLETFLGRIPMVFNVVIMSPHGYFAQDNVLGYPDTGGQ 302
           +AERV + +R      +APDP  +E    R+P +FN+V+ SPHGYF Q +VLG PDTGGQ
Sbjct: 248 SAERVKDTMRTLSEVLQAPDPMKMELLFSRLPNMFNIVVFSPHGYFGQADVLGLPDTGGQ 307

Query: 303 VVYILDQVRALEEEMLHRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRLEKVFGTEHSDI 362
           VVYILDQV+ALEEE+LHRIKQQG                A GT C Q +E V  T+HS I
Sbjct: 308 VVYILDQVKALEEELLHRIKQQGLIVKPQILVVTRLIPDARGTKCDQEIEPVLNTKHSHI 367

Query: 363 LRIPFRTEKGIVRKWISRFEVWPYLETYTEDVATEIGKELQGKPDLIIGNYSDGNIVASL 422
           LR+PFRTE G++R+W+SRF+++PYLE Y +D + +I   ++ KPDLIIGNY+DGN+VASL
Sbjct: 368 LRVPFRTENGVLRQWVSRFDIYPYLERYAQDASAKILAHMECKPDLIIGNYTDGNMVASL 427

Query: 423 LAHKLGVTECTIAHALEKTKYPESDIYWKKFDEKYHFSCQFTADLFAMNHTDFIITSTFQ 482
           +A KLGVT+ TIAHALEKTKY +SD+ WK+ D KYHFSCQFTAD+FAMN TDFIITSTFQ
Sbjct: 428 MASKLGVTQGTIAHALEKTKYEDSDVKWKELDGKYHFSCQFTADMFAMNATDFIITSTFQ 487

Query: 483 EIAG 486
           EIAG
Sbjct: 488 EIAG 491


>GSVIVT01035210001 assembled CDS
          Length = 842

 Score =  486 bits (1250), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/497 (48%), Positives = 331/497 (66%), Gaps = 11/497 (2%)

Query: 1   MAER-VITRVHSIRERLDETLKAHRNEIVALLSRIEAKGKGILQHHHIIAEFEAIPEEN- 58
           MA +  + R  S+ E + + L+  R  +    +R   KGK +++ +H++ E EA+ ++  
Sbjct: 1   MASKPTLKRADSMAENMPDALRQSRYHMKRCFARYIGKGKRLMKLNHLMDEMEAVIDDKN 60

Query: 59  -RKILLDGVFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVAEYLH 117
            R  +L+GV G +L S QEA+ +PP V  ++R  PG WEY++V+   L VE +  A+YL 
Sbjct: 61  ERTQVLEGVLGFILCSTQEAVAIPPHVIFSIRSNPGFWEYVKVSSDDLSVEAITAADYLK 120

Query: 118 FKEELVDGS-NNGNFVLELDFEPFNASFPRPTLSKYIGNGVEFLNRHLSAKLFHDKESLH 176
           FKE + D +    +  LEL+F  F+   PR TLS  IGNGV  +++ +++KL  + +S  
Sbjct: 121 FKEMVFDENWAKDDNALELNFSAFDFPMPRLTLSSSIGNGVSLVSKFMTSKLNGNSQSAQ 180

Query: 177 PLLEFLKVHCHKGKNMMLNDRIQNLNSLQYVLRKAEEYLTSLPSETPYSEFEHKFQEIGL 236
           PL+++L    H+G+ +M+ + +     LQ  L  AE ++++LP +TPY  FE +F+E G 
Sbjct: 181 PLVDYLLSLNHQGEKLMITNTLNTPTKLQMALIVAEVFVSALPKDTPYPSFELRFKEWGF 240

Query: 237 ERGWGDTAERVLEMIRXXXXXXEAPDPCTLETFLGRIPMVFNVVIMSPHGYFAQDNVLGY 296
           E+GWG+TAERV E +R      EAPDP  +E FL R+P +FNVVI SPHGYF Q +VLG 
Sbjct: 241 EKGWGNTAERVKETMRSLSEALEAPDPMNMEKFLSRLPTIFNVVIFSPHGYFGQSDVLGL 300

Query: 297 PDTGGQVVYILDQVRALEEEMLHRIKQQGXXXXXXXXXXXXXXXXAVGTTCGQRLEKVFG 356
           PDTGGQVVYILDQVRALEEE+L RIK QG                A GT C Q  E +  
Sbjct: 301 PDTGGQVVYILDQVRALEEELLLRIKLQGLNVKPQILVVTRLIPDARGTKCNQEWEPIDN 360

Query: 357 TEHSDILRIPFRTEKGIVRKWISRFEVWPYLETYTE-------DVATEIGKELQGKPDLI 409
           T+HS ILRIPFRTEKGI+ +W+SRF+++PYLE +T+       D   +I + ++GKPDLI
Sbjct: 361 TKHSTILRIPFRTEKGILNQWVSRFDIYPYLERFTQASIITSMDATAKIIEHMEGKPDLI 420

Query: 410 IGNYSDGNIVASLLAHKLGVTECTIAHALEKTKYPESDIYWKKFDEKYHFSCQFTADLFA 469
           IGNY+DGN+VASL+A KLG+T+ TIAHALEKTKY +SD+ WK+ + KYHFSCQFTAD  +
Sbjct: 421 IGNYTDGNLVASLMATKLGITQGTIAHALEKTKYEDSDVKWKELEPKYHFSCQFTADTIS 480

Query: 470 MNHTDFIITSTFQEIAG 486
           MN  DFIITST+QEIAG
Sbjct: 481 MNAADFIITSTYQEIAG 497