Jatropha Genome Database
- JcCB0374601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0374601.10 - phase: 1 /pseudo/partial
(276 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01002899001 assembled CDS 388 e-108
GSVIVT01002527001 assembled CDS 387 e-108
GSVIVT01009318001 assembled CDS 248 3e-66
GSVIVT01032135001 assembled CDS 112 2e-25
GSVIVT01034052001 assembled CDS 102 2e-22
GSVIVT01031799001 assembled CDS 80 1e-15
GSVIVT01025799001 assembled CDS 79 3e-15
GSVIVT01037520001 assembled CDS 69 2e-12
GSVIVT01023716001 assembled CDS 68 6e-12
GSVIVT01020279001 assembled CDS 64 9e-11
GSVIVT01035100001 assembled CDS 50 2e-06
GSVIVT01031244001 assembled CDS 49 2e-06
>GSVIVT01002899001 assembled CDS
Length = 342
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 208/240 (86%)
Query: 16 EQVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKE 75
EQVIDGLD+AV +MKKGEVAL+TI +YAFGSSES QELAVVPPNSTVYYEVEL SFVK+
Sbjct: 96 EQVIDGLDRAVMTMKKGEVALLTIHSDYAFGSSESSQELAVVPPNSTVYYEVELESFVKD 155
Query: 76 KESWDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIEYDSSFSEEEKKQAK 135
KESWDMNT+ NVLFKAGKY RASKRYEKA KYIEYDSSF EEEKKQAK
Sbjct: 156 KESWDMNTEEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAAKYIEYDSSFGEEEKKQAK 215
Query: 136 ALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFD 195
LKV CNLNNAACKLKLKDYKEAEKLCTKVL+++S+NVKALYRRAQAYI LADLDLAEFD
Sbjct: 216 TLKVTCNLNNAACKLKLKDYKEAEKLCTKVLDIQSKNVKALYRRAQAYIHLADLDLAEFD 275
Query: 196 IKKALEIDPDNRDVKLEYKTLKEKMREYNKKEAKFYGNMFAKMNKLGPLDSNVSVTSILP 255
IKKALEIDPDNRDVKLEY+TLKEKM+EYNKKEAKFYGNMFA+MNKL L++N + P
Sbjct: 276 IKKALEIDPDNRDVKLEYRTLKEKMKEYNKKEAKFYGNMFARMNKLEALETNKATKEAEP 335
>GSVIVT01002527001 assembled CDS
Length = 571
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 208/240 (86%)
Query: 16 EQVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKE 75
EQVIDGLD+AV +MKKGEVAL+TI +YAFGSSES QELAVVPPNSTVYYEVEL SFVK+
Sbjct: 325 EQVIDGLDRAVMTMKKGEVALLTIHSDYAFGSSESSQELAVVPPNSTVYYEVELESFVKD 384
Query: 76 KESWDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIEYDSSFSEEEKKQAK 135
KESWDMNT+ NVLFKAGKY RASKRYEKA KYIEYDSSF EEEKKQAK
Sbjct: 385 KESWDMNTEEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAAKYIEYDSSFGEEEKKQAK 444
Query: 136 ALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFD 195
LKV CNLNNAACKLKLKDYKEAEKLCTKVL+++S+NVKALYRRAQAYI LADLDLAEFD
Sbjct: 445 TLKVTCNLNNAACKLKLKDYKEAEKLCTKVLDIQSKNVKALYRRAQAYIHLADLDLAEFD 504
Query: 196 IKKALEIDPDNRDVKLEYKTLKEKMREYNKKEAKFYGNMFAKMNKLGPLDSNVSVTSILP 255
IKKALEIDPDNRDVKLEY+TLKEKM+EYNKKEAKFYGNMFA+MNKL L++N + P
Sbjct: 505 IKKALEIDPDNRDVKLEYRTLKEKMKEYNKKEAKFYGNMFARMNKLEALETNKATKEAEP 564
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 17 QVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEK 76
QVI G D+ + +MKKGE A+ TI PE A+G S S +PPN+T+ ++VEL+S+ K
Sbjct: 91 QVIKGWDQGIKTMKKGENAIFTIPPELAYGESGSS---TTIPPNATLQFDVELLSWTSVK 147
Query: 77 E 77
+
Sbjct: 148 D 148
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 22 LDKAVASMKKGEVALVTIAPEYAFG--SSESKQELAVVPPNSTVYYEVELVSF 72
L KAV +MKKGE ++T+ P+Y FG + E VPPN+T+ +ELVS+
Sbjct: 208 LSKAVKTMKKGEKVILTVKPQYGFGEKGKPASGEEGAVPPNATLEITLELVSW 260
>GSVIVT01009318001 assembled CDS
Length = 600
Score = 248 bits (632), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 162/230 (70%), Gaps = 2/230 (0%)
Query: 11 LYFLT--EQVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVE 68
L F+T EQVI GLD+AVA+M KGE ++VTI PEY +GS E Q++++VPP+S + YEVE
Sbjct: 325 LQFITDEEQVISGLDQAVATMTKGERSIVTIHPEYGYGSIEVMQDISIVPPSSIIIYEVE 384
Query: 69 LVSFVKEKESWDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIEYDSSFSE 128
++ FVKEK W+M+ Q N+LFK+GKY RA K+Y+KA Y+ F +
Sbjct: 385 MLDFVKEKAPWEMSDQEKIETAGRKKEEGNLLFKSGKYQRARKKYDKAADYVSECGIFGD 444
Query: 129 EEKKQAKALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLAD 188
+ K + L+V+C LN AAC LKL ++ A KLC+KVL++E NVKALYRRAQAY++ AD
Sbjct: 445 GDHKVVETLQVSCWLNGAACCLKLNNFPGAIKLCSKVLDIEFHNVKALYRRAQAYMKTAD 504
Query: 189 LDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMREYNKKEAKFYGNMFAKM 238
LDLA+ DIKKALE DP NR+VKL K LK+ E NK++AK Y NMFA M
Sbjct: 505 LDLAQLDIKKALEADPQNREVKLMQKNLKQLQGESNKRDAKLYSNMFAPM 554
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 17 QVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFV 73
+V+DGLD+ + +M + E+AL T+ P +G + + VPPNS V ++V+L+S++
Sbjct: 98 EVVDGLDQGIVTMTQEEIALFTVPPHLGYGEAGRQG----VPPNSVVQFQVQLISWI 150
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 9 VYLYFLTEQVIDGLDKAVASMKKGEVALVTIAPEYAFG--SSESKQELAVVPPNSTVYYE 66
+ Y Q + KA+ +MK GE + + P+YAFG +++ E ++PP+S + +
Sbjct: 203 IEFYMKDGQFCSAMPKAIKTMKSGEKVKLIVQPQYAFGDVGRDAENEFPLIPPSSVLIID 262
Query: 67 VELVSF 72
+ELVSF
Sbjct: 263 LELVSF 268
>GSVIVT01032135001 assembled CDS
Length = 365
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 19 IDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKES 78
+ GL V++MK GE AL+ + E +G E VPP + + YEVEL+ F + KE
Sbjct: 108 MTGLAIGVSNMKSGERALLHVGWELGYGK-EGSFSFPNVPPMADILYEVELIGFDETKEG 166
Query: 79 ---WDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIEYDSSFS--EEEKKQ 133
DM + NV FK K A ++YE A+ Y+ D F + +
Sbjct: 167 KARGDMTVEERIGAADRRKMDGNVYFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDM 226
Query: 134 AKALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAE 193
A A+K C+LN AAC +KLK Y+EA C+ VL + NVKAL+RR +A +L D A
Sbjct: 227 ALAVKNPCHLNMAACLIKLKRYEEAIGQCSIVLAEDENNVKALFRRGKARAELGQTDAAR 286
Query: 194 FDIKKALEIDPDNRDVKLEYKTLKEKMREYNKKEAKFYGNMFA 236
D KA + P+++ + E + L E + +K+ + Y +F
Sbjct: 287 EDFSKARKYAPEDKAISRELRLLAEHDKAVYQKQKEIYKGIFG 329
>GSVIVT01034052001 assembled CDS
Length = 620
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 18 VIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKEKE 77
V +GL+ V M GE+ALVT P+YA+ + A VP + V +E+EL+ F K+
Sbjct: 332 VPEGLEMCVRLMLPGEIALVTCPPDYAY---DKFPRPANVPEGAHVQWEIELLGFEMPKD 388
Query: 78 SWDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIEYDSSFSEEEKKQAKAL 137
+N + N LFK GK+ A +YEK ++ + + +EE K
Sbjct: 389 WTGLNFEAIMDEADKIRGTGNRLFKEGKFELAKAKYEKVLREFNHVNPQDDEEGKVFLNA 448
Query: 138 KVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIK 197
+ + +LN AAC LK+ + +++ + C KVL+ +VKALYRR AY+ D + A D K
Sbjct: 449 RNSLHLNVAACYLKMGECRKSIEACNKVLDASPAHVKALYRRGMAYMSAGDFEEARNDFK 508
Query: 198 KALEIDPD-NRDVKLEYKTLKEKMREYNKKEAKFYGNMFAK 237
+ ID D LK+K +E +K + +F K
Sbjct: 509 MMMSIDKSCEPDATAALVKLKQKEQEVERKARSQFKGLFDK 549
>GSVIVT01031799001 assembled CDS
Length = 361
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
Query: 98 NVLFKAGKYVRASKRYEKAVKYIE--YDSSFSEEEKKQA-KALKVACNLNNAACKLKLKD 154
N FK Y A ++Y KA++Y++ ++ +EEK + K N++ACKLKL D
Sbjct: 220 NEHFKKQDYKMALRKYRKALRYLDICWEKEGIDEEKSSCLRKTKSLIFTNSSACKLKLGD 279
Query: 155 YKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNRDVKLEYK 214
K A + E NVKALYR+ QAY+ L D+D A KKALE++P++ +K E
Sbjct: 280 LKGALLDTDFAMRDEENNVKALYRQGQAYMALNDIDAAAESFKKALELEPNDGGIKRELA 339
Query: 215 TLKEKMREYNKKEAKFYGNMF 235
K+K+ + ++E K Y MF
Sbjct: 340 AAKKKIADRREQERKAYSRMF 360
>GSVIVT01025799001 assembled CDS
Length = 398
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 16 EQVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFVKE 75
EQ+ +GLD+A+ +M+KGE ALVTI ++ + +V NS +YEVEL+ F KE
Sbjct: 301 EQINEGLDRAIMTMRKGEQALVTI-------QADGHEVSGMVSANSLHHYEVELIDFTKE 353
Query: 76 KESWDMNTQXXXXXXXXXXXXXNVLFKAGKYVRASKRYEKAVKYIE 121
+ W M N+LFKAGK+ ASK+YEK + Y+E
Sbjct: 354 RPFWKMENHEKLEACERKKHDGNMLFKAGKFWHASKKYEKEI-YLE 398
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 17 QVIDGLDKAVASMKKGEVALVTIAPEYAFGSSESKQELAVVPPNSTVYYEVELVSF 72
+VI G ++ VA+MKKGE A+ TI P+ A+G + ++PPNST+ Y++E++S+
Sbjct: 68 EVIKGWEEGVATMKKGERAIFTIPPDLAYGETGLP---PLIPPNSTLIYDIEMLSW 120
>GSVIVT01037520001 assembled CDS
Length = 584
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 98 NVLFKAGKYVRASKRYEKAVKYIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKDYKE 157
N L GK+ AS++Y A K + + + + L +AC+LN +C LK K Y E
Sbjct: 106 NELHNKGKFNEASQKYLLAKKNLTGIPA------SKGRTLLLACSLNLMSCYLKTKQYDE 159
Query: 158 AEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 217
+ T+VL + +NVKALYRR QAY +L L+ A D+ KA + P++ + + +K
Sbjct: 160 CIQEGTEVLAYDPKNVKALYRRGQAYKELGQLNDAVSDLNKAYGVSPEDETIGEVLRDVK 219
Query: 218 EKM 220
EK+
Sbjct: 220 EKL 222
>GSVIVT01023716001 assembled CDS
Length = 262
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 98 NVLFKAGKYVRASKRYEKAVKYI-EYDSSFSEEEKKQAKALKVACNLNNAACKLKLKDYK 156
N LF AG+Y A +YE A++ E SS ++ C+ N A C LKL+ +
Sbjct: 98 NKLFGAGQYQEALSQYELALQVAPEMPSSVE---------IRSICHANQAICFLKLEKIE 148
Query: 157 EAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNRDVK 210
+A K CTK LEL +KAL RRA+A+ +L + A D KK LE+DP N +
Sbjct: 149 DAIKECTKALELNPTYMKALTRRAEAHEKLEHFEEALADTKKILELDPSNSQAR 202
>GSVIVT01020279001 assembled CDS
Length = 122
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 133 QAKALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLA 192
+ +A K+A + N AAC LKL D+ +A K CT VLEL+ ++ AL RAQ + L + A
Sbjct: 22 KTRAQKIALHSNRAACYLKLHDFDKAAKECTSVLELDHKHTGALMLRAQTLVTLKEYHSA 81
Query: 193 EFDIKKALEIDPDN---RDVKLEYKT 215
FD+K+ +E++P + R+++ KT
Sbjct: 82 LFDVKRLMELNPSSEVYRNLEARLKT 107
>GSVIVT01035100001 assembled CDS
Length = 451
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 112 RYEKAVKYIEYDSSFSEEEKKQAKALKV-ACNLNNAACKLKLKDYKEAEKLCTKVLELES 170
+Y A+K++ + E+ A ++V C A+C ++ +YK+A C+KVLE +
Sbjct: 344 QYADAIKWLSWAVVLLEKAGDDAGTMEVLTCR---ASCYKEVGEYKKAVADCSKVLEHDE 400
Query: 171 RNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNR 207
+NV L +RA Y + L D++ L+ DP NR
Sbjct: 401 KNVSVLVQRALLYESIEKYKLGAEDLRTVLKFDPGNR 437
>GSVIVT01031244001 assembled CDS
Length = 1097
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 144 NNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIKKALEID 203
N A +K+K ++EAE C + L L+ R +KA RRA A +L A D + AL ++
Sbjct: 766 NRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATEDAEFALRLE 825
Query: 204 PDNRDVKLEY---KTLKEK 219
P N+++K +Y K+L EK
Sbjct: 826 PQNQEIKKQYAEAKSLYEK 844