Jatropha Genome Database
- JcCB0362691.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0362691.10 - phase: 1 /TE/partial
(648 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01028612001 assembled CDS 315 4e-86
GSVIVT01034745001 assembled CDS 206 2e-53
GSVIVT01014104001 assembled CDS 119 6e-27
GSVIVT01037631001 assembled CDS 113 3e-25
GSVIVT01017026001 assembled CDS 102 8e-22
GSVIVT01038695001 assembled CDS 80 3e-15
GSVIVT01017482001 assembled CDS 55 8e-08
GSVIVT01037342001 assembled CDS 55 1e-07
>GSVIVT01028612001 assembled CDS
Length = 3048
Score = 315 bits (807), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/372 (46%), Positives = 230/372 (61%), Gaps = 15/372 (4%)
Query: 274 FVDKSKVECYRCHRYGHYQSECRTNLNKDGGRQSXFAEKEEESEITLLMACQASNQTEED 333
F DK+ +ECY CH+ GH+ EC +++ G + +A+ +EE LLMA N+T
Sbjct: 266 FFDKATMECYNCHKLGHFAWECP---HRETG--AYYAKNQEE---MLLMAYVDLNKT--- 314
Query: 334 TKQNIWYLDTGCSNHMSGNKSAFSIFDETYRDSVKFGNNSRVSIMGKGQXXIQTRRNVTX 393
++++ W+LD+GCSNHM G K FS FD T+RDSVK GNN+ +S++GKG ++ +T
Sbjct: 315 SREDTWFLDSGCSNHMCGKKDYFSDFDGTFRDSVKLGNNTSMSVLGKGNVRLKVNE-MTQ 373
Query: 394 KISNVIYVPNLNINLPNIGQLQEKGYEIQIKNGVCQLLDDNLGLIAEVKMIANRMFPLH- 452
I+ V YVP L NL +IGQLQEKG I ++G C++ GLI + KM +NRMF L+
Sbjct: 374 IITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHSQKGLIMDTKMSSNRMFMLYA 433
Query: 453 LNHVILS-CFFVKQGDEAWLWHFRYRHLNFGGLKTMQQKNMVIGLPQISPPSQTCEDCVM 511
L+ I S CF D LWH RY HL+F GLKT+QQ+ MV GLPQ PPS+ C+DC++
Sbjct: 434 LSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLV 493
Query: 512 SKQHRNSFPQGKSKRAKAVLELVHSDICGPITPCSNGGKRYVITFIDDNTRKIWVYFLQE 571
KQHR+S P+ + RA +L+LVH+DICGPI P SN KRY++TF DD +RK WVYFL E
Sbjct: 494 GKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVE 553
Query: 572 NXXXXXXXXXXXXXXXXXXEVQXK-LFEQTVGXIXLTXICKFCELHGIKRQLTAAYSPQQ 630
+ L G FC++HGI+RQLTAAY+PQQ
Sbjct: 554 KSEAFAVFKSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQ 613
Query: 631 NGSCERKIDTII 642
NG ERK TI+
Sbjct: 614 NGVAERKNRTIM 625
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
Query: 167 TSKFNYV-CSIEETKDTSDLSIDELQSSLLVHEXKMNSQ-HTEEQAL 211
TSKF+YV CSIEE+KD L+IDELQSSLLVHE +M S EEQAL
Sbjct: 191 TSKFDYVVCSIEESKDLDTLTIDELQSSLLVHEQRMTSHVLEEEQAL 237
>GSVIVT01034745001 assembled CDS
Length = 2196
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 191/372 (51%), Gaps = 8/372 (2%)
Query: 277 KSKVECYRCHRYGHYQSECRTNLNKDGGRQ---SXFAEKEEESEITLLMACQASNQTEED 333
K C C++ GH + CR + + + E+++ + L MA QA + E
Sbjct: 269 KPLFNCNFCNKLGHSEKYCRAKKKQSQQQPKQNANVTEEDKNDDEHLFMASQALSSHELS 328
Query: 334 TKQ-NIWYLDTGCSNHMSGNKSAFSIFDETYRDSVKFGNNSRVSIMGKGQXXIQTRRNVT 392
+ + N W +D+GC++HM+ S F+ D + + VK GN V GKG I T+R T
Sbjct: 329 SHELNTWLIDSGCTSHMTKYLSIFTSIDRSVQPKVKLGNGEVVQAKGKGTIAISTKRR-T 387
Query: 393 XKISNVIYVPNLNINLPNIGQLQEKGYEIQIKNGVCQLLDDNLGLIAEVKMIANRMFPLH 452
++NV+Y+P+L+ NL ++ Q+ GY + K C + + + IA++KM N F L
Sbjct: 388 KIVTNVLYIPDLDQNLLSVAQMLRNGYAVFFKGNFCFITNVHGKEIAKIKMNGNN-FYLK 446
Query: 453 LNHVILSCFFVKQGDEAWLWHFRYRHLNFGGLKTMQQKNMVIGLPQISPPSQTCEDCVMS 512
L+ V F K DE+ +WH RY H N L+ MQ+ MV +P+IS +QTCE C +
Sbjct: 447 LDLVEGHVFSAKI-DESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELG 505
Query: 513 KQHRNSFPQGKSKRAKAVLELVHSDICGPITPCSNGGKRYVITFIDDNTRKIWVYFLQEN 572
KQ R FPQ SK+A LEL++SDICGP++ S Y FIDD +R WVYFL+
Sbjct: 506 KQQRQPFPQNMSKKATHKLELINSDICGPMSTASLSNNVYFALFIDDLSRMTWVYFLKTK 565
Query: 573 XXXXXXXXXXXXXXXXXXEVQXKLFEQTVGXIXLT-XICKFCELHGIKRQLTAAYSPQQN 631
K+ G ++ + FC+ GI QL A YSPQQN
Sbjct: 566 SQVLSVFKSFKKMVETQSGQNVKVLRTDNGGEYISKELNVFCQEAGIVHQLIAPYSPQQN 625
Query: 632 GSCERKIDTIIE 643
G ERK T++E
Sbjct: 626 GVFERKNRTVME 637
>GSVIVT01014104001 assembled CDS
Length = 1354
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 56/397 (14%)
Query: 277 KSKVECYRCHRYGHYQSECRTNLNKDGGRQSXFAEKEEESEITLLMACQASNQTEEDTKQ 336
K V CY C + GH + +C R++ F E+ I L C SN E
Sbjct: 614 KFTVSCYFCGKKGHVKKDCIK-------RKAWF----EKRGINLSFVCYESNLAE--VPS 660
Query: 337 NIWYLDTGCSNHMSGNKSAFSIFDETYRDSVKF---GNNSRVSIMGKGQXXIQTRRNVTX 393
N W++D+G + H++ F + ++S KF GN +V ++ G +
Sbjct: 661 NTWWIDSGATTHVTNLMQGF-LTTRKPKESEKFLYMGNRLKVEVVAVGTYRLLLETGHRM 719
Query: 394 KISNVIYVPNLNINLPNIGQLQEKGYEIQIKNGVCQLLDDNLGLIAEVKMIANRMFPLHL 453
+ N YVP+++ NL ++ +L GY + +G L+ +++ + + + + + ++ + L
Sbjct: 720 DLLNTFYVPSISRNLVSLSKLDATGYSVLFSSGQLSLMLNSVTIGSGI--LCDGLYKISL 777
Query: 454 NHVILSCFFV-------KQG----DEAWLWHFRYRHLNFGGLKTMQQKNMVIGLPQISPP 502
NH K+G + + LWH R H++ ++ + ++ ++ L
Sbjct: 778 NHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNLDFTD-- 835
Query: 503 SQTCEDCVMSKQHRNSFPQGKSKRAKAVLELVHSDICGPIT-PCSNGGKRYVITFIDDNT 561
C +C+ KQ +++ + + R+ +LE++H+DICGP++ PC G++Y ITFIDD +
Sbjct: 836 FHVCVNCIKGKQTKHT--KKGATRSNELLEIIHTDICGPLSIPCFT-GEKYFITFIDDLS 892
Query: 562 RKIWVYFLQENXXXXXXXXXXXXXXXXXXEVQXKLFE---------------QTVGXIXL 606
R +VY + E + + K+ Q G
Sbjct: 893 RYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQNPG---- 948
Query: 607 TXICKFCELHGIKRQLTAAYSPQQNGSCERKIDTIIE 643
KF E HGI+ Q T +PQQNG ER+ T++E
Sbjct: 949 -PFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLME 984
>GSVIVT01037631001 assembled CDS
Length = 1940
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 18/274 (6%)
Query: 268 DHSKPKFVDKSKVECYRCHRYGHYQSECRTNLNKDGGRQSXFAEKEEESEITLLMACQAS 327
+HS K + V+C +C + GH + C+ ++ + ++E+ T C A+
Sbjct: 972 NHSPKKCWWRPDVKCNKCGKQGHVERICKNQQQEETNAVVDYCQEEQLFAAT----CFAN 1027
Query: 328 NQTEEDTKQNIWYLDTGCSNHMSGNKSAFSIFDETYRDSVKFGNNSRVSIMGKGQXXIQT 387
T + W +D+GC+NHM+ N+ F D T V+ GN + + GKG I++
Sbjct: 1028 KSTSKS-----WLVDSGCTNHMTNNQDLFRELDRTTISKVRIGNGEYIPVKGKGTVAIES 1082
Query: 388 RRNVTXKISNVIYVPNLNINLPNIGQLQEKGYEIQIKNGVCQLLDDNLGLIAEVKMIANR 447
+ + I +V++VP+++ NL ++GQL EK +++ ++ C + D + +KM +
Sbjct: 1083 QTGLK-LIYDVLFVPDIDQNLLSVGQLVEKEFKVYFEDRNCIIKDAEGKEVFNIKM-KGK 1140
Query: 448 MFPLHL---NHVILSCFFVKQGDEAWLWHFRYRHLNFGGLKTMQQKNMVIGLPQISPPSQ 504
F L+L H + ++Q W R H + + M++ +V GLP +
Sbjct: 1141 SFALNLLEDEHTAI----LQQDSTTMFWDRRVEHFHHDDVLYMKKNQIVEGLPDLEKDLP 1196
Query: 505 TCEDCVMSKQHRNSFPQGKSKRAKAVLELVHSDI 538
C C KQ + FP+ S RA L+LVH+D+
Sbjct: 1197 ICATCQYGKQTKLPFPKKISWRATQKLQLVHTDV 1230
>GSVIVT01017026001 assembled CDS
Length = 1273
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 155/366 (42%), Gaps = 32/366 (8%)
Query: 289 GHYQSECRTNLNKDGGRQSXFAEKEEESEITLLMACQASNQTEEDTKQNIWYLDTGCSNH 348
GHY C N+ R A E +C S D W+LDTG S H
Sbjct: 836 GHYADRC----NQRYARTDSSAHLAEAFN----TSCSLSGPEAAD-----WFLDTGASAH 882
Query: 349 MSGNKSAFSIFDETY----RDSVKFGNNSRVSIMGKGQXXIQTRRNVTXKISNVIYVPNL 404
M+ + S I D++ +DSV GN + + I G + + N+ + +V+ VP+L
Sbjct: 883 MTTDPS---ILDQSKNYMGKDSVIVGNGASLPITHTG--TLSSVPNI--HLLDVLVVPHL 935
Query: 405 NINLPNIGQL-QEKGYEIQIKNGVCQLLDDNLGLIAEVKMIANRMFPLHL-NHVILSCFF 462
NL +I +L + + N + + + G + ++ L N +S
Sbjct: 936 IKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATGKRDGGLYVLERGNSAFISVLK 995
Query: 463 VKQGDEAW-LWHFRYRHLNFGGLKTMQQKNMVIGLPQISPPSQTCEDCVMSKQHRNSFPQ 521
K ++ LWH R H+N+ + + +K + L + P C C ++K HR + +
Sbjct: 996 NKSLRASYDLWHARLGHVNYFVISFLHKKGH-LSLMSLLPSPSLCSTCQLAKNHRLPYSR 1054
Query: 522 GKSKRAKAVLELVHSDICGPITPCSNGGKRYVITFIDDNTRKIWVYFLQENXXXXXXXXX 581
+ R+ VL+L+H D+ GP SN G Y + FIDD +R W+Y L+
Sbjct: 1055 NE-HRSSHVLDLIHCDLPGPSPIKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQ 1113
Query: 582 XXXXXXXXXEVQXKLFEQTVGXIXLTXICKFCELH--GIKRQLTAAYSPQQNGSCERKID 639
+ K+F Q+ G T C L GI QL+ Y+P QNG ERK
Sbjct: 1114 FKKFVENQHFARIKVF-QSDGGAEFTNTCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHR 1172
Query: 640 TIIEYG 645
+ E G
Sbjct: 1173 HVTETG 1178
>GSVIVT01038695001 assembled CDS
Length = 740
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 265 RDDDHSKPKFVDKSKVECYRCHRYGHYQSECRTNLNKDGGRQSXFAEKEEESEITLLMAC 324
+ +HS K + V+C +C + G+ + C+ ++ + ++E+ T C
Sbjct: 140 KKTNHSPQKCWWRPDVKCNKCGKQGNMERICKNQQQEETSAAVDYCQEEQLFAAT----C 195
Query: 325 QASNQTEEDTKQNIWYLDTGCSNHMSGNKSAFSIFDETYRDSVKFGNNSRVSIMGKGQXX 384
A+ T + W +D+GC+NHM+ N+ F D T V+ GN + + GKG
Sbjct: 196 FANKSTSKS-----WLVDSGCTNHMTNNQDLFRELDRTTISKVRIGNGEYIPVKGKGTVA 250
Query: 385 IQTRRNVTXKISNVIYVPNLNINLPNIGQLQEKGYEIQIKNGVCQLLDDNLGLIAEVKMI 444
I+++ + I +V++VP+++ NL ++GQL EK +++ ++ C + D + +KM
Sbjct: 251 IESQTGLK-LIYDVLFVPDIDQNLLSVGQLVEKEFKVYFEDRNCIIKDAEGKEVFNIKMK 309
Query: 445 ANRMFPL 451
PL
Sbjct: 310 GKSFDPL 316
>GSVIVT01017482001 assembled CDS
Length = 216
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 281 ECYRCHRYGHYQSECRTNLNKDGGRQSXFA--EKEEESEITLLMACQASNQTEEDTKQNI 338
+CY C + H +C +K G +S A + E+E + + A + T + I
Sbjct: 64 KCYNCRKKCHMAKDC---WSKKGLVESNAATSKSEDEWDAQVFFAAIGESAFIATTSEKI 120
Query: 339 -----WYLDTGCSNHMSGNKSAFSIFDE-TYRDSVKFGNNSRVSIMGKGQXXIQTRRNVT 392
W +D+GCSNHM+G+K E R V NNS++ I G + ++ N
Sbjct: 121 DYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTVNNSKLPIAHIGNTIVSSQYNTN 180
Query: 393 -XKISNVIYVPNLNINLPNIGQLQEKGY 419
+ NV +VP + NL ++ QL G+
Sbjct: 181 DVSLQNVYHVPGMKKNLLSVAQLTSSGH 208
>GSVIVT01037342001 assembled CDS
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 334 TKQNIWYLDTGCSNHMSGNKSAFSIF---DETYRDSVKFGNNSRVSIMGKGQXXIQTRRN 390
T N W +D+G S H+ GN AF+ F +E V G+ + ++GKGQ ++ N
Sbjct: 164 TYLNDWIIDSGASVHICGNIRAFNYFTPIEEGEHRMVLVGDLRPLPVIGKGQVVLKLASN 223
Query: 391 VTXKISNVIYVPNLNINLPNIGQLQEKGYEI 421
+++V+YVPN+++NL ++ L + G +
Sbjct: 224 NILVLNDVLYVPNISLNLISVSSLGKTGIRV 254