Jatropha Genome Database

JcCB0360021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0360021.10 - phase: 0 /partial
         (147 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01010024001 assembled CDS                                       229   3e-61
GSVIVT01026505001 assembled CDS                                       229   4e-61
GSVIVT01026507001 assembled CDS                                       229   4e-61
GSVIVT01026510001 assembled CDS                                       227   2e-60
GSVIVT01010027001 assembled CDS                                       227   2e-60
GSVIVT01026508001 assembled CDS                                       220   2e-58
GSVIVT01028452001 assembled CDS                                       160   2e-40
GSVIVT01024246001 assembled CDS                                       145   8e-36
GSVIVT01019673001 assembled CDS                                       132   8e-32
GSVIVT01009078001 assembled CDS                                       121   1e-28
GSVIVT01008701001 assembled CDS                                       121   1e-28
GSVIVT01008703001 assembled CDS                                       120   2e-28
GSVIVT01025014001 assembled CDS                                        91   2e-19
GSVIVT01025010001 assembled CDS                                        89   6e-19
GSVIVT01024332001 assembled CDS                                        72   1e-13
GSVIVT01025012001 assembled CDS                                        56   6e-09

>GSVIVT01010024001 assembled CDS
          Length = 380

 Score =  229 bits (584), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 103/141 (73%), Positives = 123/141 (87%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVT+FVNPKDH+K VQ+V+ EMT GGVDRS+ECT NV AMISAFE VHDGWGVAV+
Sbjct: 236 AKKFGVTDFVNPKDHEKSVQEVIVEMTGGGVDRSLECTGNVNAMISAFECVHDGWGVAVI 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGV NKDDVF+THP   L+ERTLK TF+GN+KP +DIP + EKY+NK+LE +KFITHS+P
Sbjct: 296 VGVPNKDDVFKTHPINLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVP 355

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           FS+IN AF+ ML GEG+RC+I
Sbjct: 356 FSEINKAFEYMLNGEGLRCII 376


>GSVIVT01026505001 assembled CDS
          Length = 380

 Score =  229 bits (584), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 102/141 (72%), Positives = 123/141 (87%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVTEFVNPKDH KPVQ+V+AEMT+GGVDRS+ECT NV AMISAFE VHDGWGVAVL
Sbjct: 236 AKKFGVTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVL 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGV NKDD F+THP   L+ERTLK TF+GN+KP +D+P + EKY+NK+LE +KFITH +P
Sbjct: 296 VGVPNKDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVP 355

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           F++IN AF+ ML G+G+RC+I
Sbjct: 356 FAEINKAFEYMLSGDGLRCII 376


>GSVIVT01026507001 assembled CDS
          Length = 380

 Score =  229 bits (584), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 102/141 (72%), Positives = 123/141 (87%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVTEFVNPKDH KPVQ+V+AEMT+GGVDRS+ECT NV AMISAFE VHDGWGVAVL
Sbjct: 236 AKKFGVTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVL 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGV NKDD F+THP   L+ERTLK TF+GN+KP +D+P + EKY+NK+LE +KFITH +P
Sbjct: 296 VGVPNKDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVP 355

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           F++IN AF+ ML G+G+RC+I
Sbjct: 356 FAEINKAFEYMLSGDGLRCII 376


>GSVIVT01026510001 assembled CDS
          Length = 380

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 122/141 (86%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVTEF+NPKDH KP+Q+V+AEMT GGVDRS+ECT NV AMISAFE VHDGWGVAVL
Sbjct: 236 AKKFGVTEFLNPKDHDKPIQEVIAEMTGGGVDRSVECTGNVNAMISAFECVHDGWGVAVL 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGV NKDD F+THP   L+ERTLK TF+GN+KP +D+P + EKY+NK+LE +KFITH +P
Sbjct: 296 VGVPNKDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHEVP 355

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           F++IN AF+ ML G+G+RC+I
Sbjct: 356 FAEINKAFEYMLSGDGLRCII 376


>GSVIVT01010027001 assembled CDS
          Length = 382

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 122/143 (85%), Gaps = 2/143 (1%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVTEFVNPKDH KPVQ+V+AEMT+GGVDRSIECT +V AMISAFE VHDGWGVAVL
Sbjct: 236 AKKFGVTEFVNPKDHDKPVQEVIAEMTDGGVDRSIECTGSVAAMISAFECVHDGWGVAVL 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQ--LEFDKFITHS 120
           VGV N+DD F+THP   L+ERTLK TF+GNFKP TD+P L EKY+NK+  L+ +KFITH 
Sbjct: 296 VGVPNRDDSFKTHPINLLNERTLKGTFFGNFKPRTDLPRLVEKYVNKELDLQLEKFITHE 355

Query: 121 IPFSKINTAFDLMLKGEGIRCLI 143
           + FS IN AFD MLKGEG+RC+I
Sbjct: 356 VSFSDINKAFDYMLKGEGLRCII 378


>GSVIVT01026508001 assembled CDS
          Length = 387

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 99/138 (71%), Positives = 119/138 (86%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AKKFGVTEFVNPKDH KPVQ+V+AEMT GGVDRS+ECT NV AMISAFE VHDGWGVAVL
Sbjct: 236 AKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDRSVECTGNVNAMISAFECVHDGWGVAVL 295

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGV NKDD F+THP   L+ERTLK TF+GN+KP +D+P + EKY+NK+LE +KFITH +P
Sbjct: 296 VGVPNKDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHEVP 355

Query: 123 FSKINTAFDLMLKGEGIR 140
           F++IN AF+ ML+G+G+ 
Sbjct: 356 FAEINKAFEYMLQGDGLH 373


>GSVIVT01028452001 assembled CDS
          Length = 236

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 97/141 (68%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AK FGVTEFVNPKDH+KP+Q VL ++T+GGVD S EC  NV  M +A E  H GWG +V+
Sbjct: 92  AKNFGVTEFVNPKDHEKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 151

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           VGVA       T PF+ ++ R  K T +G FK  + +P L EKY+ K+++ D++ITH++ 
Sbjct: 152 VGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYMKKEIKVDEYITHNLT 211

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
             +IN AFDLM +G  +RC++
Sbjct: 212 LGEINEAFDLMHEGGCLRCVL 232


>GSVIVT01024246001 assembled CDS
          Length = 379

 Score =  145 bits (365), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 96/141 (68%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
           AK FG+TEFVNP D  +PVQ V+ +MT+GG D S EC  +   + +A +S  DGWG+ V 
Sbjct: 235 AKAFGITEFVNPHDCNEPVQQVIKQMTDGGADYSFECIGDTGMVTTALQSCCDGWGLTVT 294

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           +GV   +    +H   FLS RTL+ + +G ++P +D+  L + Y+ K+++ D+FITH++P
Sbjct: 295 LGVPKVNPEISSHYGLFLSGRTLRGSLFGGWRPKSDLHSLVDMYMRKEIQIDEFITHNLP 354

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           F  IN AFDLM++G+ +RC+I
Sbjct: 355 FEDINKAFDLMMEGKCLRCVI 375


>GSVIVT01019673001 assembled CDS
          Length = 394

 Score =  132 bits (331), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 86/141 (60%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAVL 62
            K  G+T+F+NP D K PV +++ EMT GGVD S EC  N+  +  AF S H+GWG+ VL
Sbjct: 252 GKAMGLTDFINPNDSKNPVHEIIQEMTGGGVDYSFECAGNLDVLREAFLSTHEGWGMTVL 311

Query: 63  VGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSIP 122
           +G+     +   HP +    R +  + +G+FK  T +P  A++ +   +  D+FITH +P
Sbjct: 312 LGIHPTPRMLPIHPMELFDGRRIIGSVFGDFKGKTQLPHFAQQCMRGVVNLDEFITHELP 371

Query: 123 FSKINTAFDLMLKGEGIRCLI 143
           F KIN AF L+  G+ +RC++
Sbjct: 372 FEKINEAFQLLADGKSLRCVL 392


>GSVIVT01009078001 assembled CDS
          Length = 387

 Score =  121 bits (304), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 3   AKKFGVTEFVNPKD-HKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAV 61
            KKFGVT F+NP    +K V  V+ EMT+GG D   EC      M  AF+   +GWG  V
Sbjct: 242 GKKFGVTHFINPTACGEKAVSQVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGKTV 301

Query: 62  LVGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHSI 121
           ++GV         +  + L  R++  + +G  KP +DIP+LA+KY++K+L  D+FITH +
Sbjct: 302 ILGVEMHGSDLNVNSSQILRGRSVMGSLFGGLKPKSDIPILAKKYIDKELRLDEFITHEV 361

Query: 122 PFSKINTAFDLMLKGEGIRCLI 143
            F  IN AF+   +G+ IRC+I
Sbjct: 362 NFQDINKAFEFQSQGKSIRCII 383


>GSVIVT01008701001 assembled CDS
          Length = 384

 Score =  121 bits (304), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 88/143 (61%), Gaps = 2/143 (1%)

Query: 3   AKKFGVTEFVNPKD-HKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVAV 61
            KKFGVT+FVN  +   KPV+ V+ EMT+GG D   EC      +  AF     GWG  +
Sbjct: 238 GKKFGVTDFVNSGNCGNKPVKQVIMEMTDGGADYCFECVGAASLVHEAFACCRKGWGKTI 297

Query: 62  LVGVANKDDVFQTHPFKFL-SERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHS 120
           ++GV     +     F  L S ++L  + YG  KP +DIP+L ++Y++K+L+ DKF+TH 
Sbjct: 298 VLGVDRPGSMLNFLSFDILHSGKSLMGSLYGGVKPKSDIPILLKRYMDKELDVDKFVTHE 357

Query: 121 IPFSKINTAFDLMLKGEGIRCLI 143
           + F  IN AFDL+++G+ +RC++
Sbjct: 358 MRFEDINKAFDLLIQGKSLRCVL 380


>GSVIVT01008703001 assembled CDS
          Length = 395

 Score =  120 bits (302), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 85/144 (59%), Gaps = 2/144 (1%)

Query: 2   TAKKFGVTEFVNPKD-HKKPVQDVLAEMTNGGVDRSIECTRNVQAMISAFESVHDGWGVA 60
            AKKFGVTEFVNP++   KPV   + EMT+GG D   EC      +  AF S   GWG A
Sbjct: 248 VAKKFGVTEFVNPRNCGDKPVSQAIVEMTDGGADYCFECVGFASLVQDAFASCRKGWGKA 307

Query: 61  VLVGVANKDDVFQTHPFKFL-SERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITH 119
           ++VGV     +      + L   +++  + YG  KP + IP+L ++ ++K+L  D FITH
Sbjct: 308 IMVGVDKPGAMLNFSSVEMLHCGKSVMGSIYGGLKPKSHIPVLLQRLVDKELNVDNFITH 367

Query: 120 SIPFSKINTAFDLMLKGEGIRCLI 143
            + F  IN AFDL+ KG+ IRC++
Sbjct: 368 EMKFEDINKAFDLLAKGKSIRCVM 391


>GSVIVT01025014001 assembled CDS
          Length = 410

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNG-GVDRSIECTRNVQAMIS-AFESVHDGWGVA 60
            K FG+T+F+NP    KP+ +++ E+T G GVD S EC+  +Q++I+   +    G G+ 
Sbjct: 268 GKNFGMTDFINPSKSNKPISELVRELTRGEGVDYSFECS-GIQSLINEVLQPTKVGKGML 326

Query: 61  VLVGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQLEFDKFITHS 120
           +++G  N +     +    L  RT+K   +G  K  +DIPLL  K +NK+++ D  +TH 
Sbjct: 327 IVIGAGN-NASMDINFLTLLLGRTIKGCIFGGIKVQSDIPLLVNKCINKEIQLDDLLTHE 385

Query: 121 IPFSKINTAFDLMLKGEGIRCLI 143
           I   +I   ++L+ + + I+ LI
Sbjct: 386 IQLEEIKKVYELLKQPDCIKVLI 408


>GSVIVT01025010001 assembled CDS
          Length = 527

 Score = 89.4 bits (220), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 85/147 (57%), Gaps = 6/147 (4%)

Query: 2   TAKKFGVTEFVNPKDHKKPVQDVLAEMTNG-GVDRSIECTRNVQAMISAFESVHDGWGVA 60
             + FG+T+F+NP +  K + +++ E+T G GVD S ECT     +  A ++   G G++
Sbjct: 380 VGEAFGMTDFINPNESNKSISELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMS 439

Query: 61  VLVGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQ----LEFDKF 116
           +++G+AN   V        LS +TLK  F+G  K  +DIP++ +K +NK     ++ D+ 
Sbjct: 440 MVLGIANVPTV-DISLMALLSGKTLKGCFFGGIKVQSDIPVIVDKCINKASSLDIQLDEL 498

Query: 117 ITHSIPFSKINTAFDLMLKGEGIRCLI 143
           +TH +    +N AF+L+ + + ++ LI
Sbjct: 499 LTHEVQLEDMNKAFELLKQPDCVKVLI 525



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 8   VTEFVNPKDHKKPVQDVLAEMTNG-GVDRSIECTRNVQAMISAFESVHDGWGVAVLVGVA 66
           + +F+NP +  KP+  ++ E+T   GVD ++ECT  +Q +I+            V +  +
Sbjct: 1   MIDFINPSESNKPISKLVYELTEEEGVDYNLECT-GIQYLINEIFQATKVVKRNVDINWS 59

Query: 67  NKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNKQL 111
             ++    + +  L   T+K+  +G  K  +DIPL+A K +NK+L
Sbjct: 60  GNEESMDINFWIHLLGTTIKECLFGGIKAQSDIPLIANKCINKKL 104


>GSVIVT01024332001 assembled CDS
          Length = 178

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 3   AKKFGVTEFVNPKDHKKPVQDVLAEMTNG-GVDRSIECTRNVQAMISAFESVHDGWGVAV 61
            K FG+T+F+NP +  K +  ++ E+T G GVD S ECT  +  +  A ++   G G+  
Sbjct: 67  GKAFGMTDFINPSESDKTISQLVKELTEGEGVDYSFECTGYMNLINEALQATKAGKGMLT 126

Query: 62  LVGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNK 109
           +VG A K+   Q      ++ RT+K + +G  K  + IP++ EK +NK
Sbjct: 127 VVG-AGKNAPVQIDFMTLIAGRTMKGSIFGGIKVQSGIPVIVEKCINK 173


>GSVIVT01025012001 assembled CDS
          Length = 375

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 50  FESVHDGWGVAVLVGVANKDDVFQTHPFKFLSERTLKDTFYGNFKPLTDIPLLAEKYLNK 109
            ++   G G+ +++G  NK  V   +    L  RT+    +G  K  +DIPLL  K +NK
Sbjct: 281 LQTTKVGKGMLIVIGAGNKASV-DINFLTLLLGRTINGCIFGGIKVQSDIPLLVNKCINK 339

Query: 110 QLEFDKFITHSIPFSKINTAFDLMLKGEGIRCLI 143
           +++ D  +T+ I   +I  A++L+ + + I+ LI
Sbjct: 340 EIQLDDLLTNEIQLEEIKKAYELLKQPDCIKVLI 373