Jatropha Genome Database
- JcCB0353461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0353461.10 - phase: 2 /partial
(279 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01036037001 assembled CDS 296 8e-81
GSVIVT01036499001 assembled CDS 171 3e-43
GSVIVT01029107001 assembled CDS 158 2e-39
GSVIVT01033017001 assembled CDS 66 2e-11
GSVIVT01011897001 assembled CDS 65 5e-11
GSVIVT01030127001 assembled CDS 64 1e-10
GSVIVT01027910001 assembled CDS 63 2e-10
GSVIVT01010991001 assembled CDS 63 2e-10
GSVIVT01027443001 assembled CDS 61 7e-10
GSVIVT01003983001 assembled CDS 61 7e-10
GSVIVT01010855001 assembled CDS 60 1e-09
GSVIVT01038647001 assembled CDS 60 1e-09
GSVIVT01020352001 assembled CDS 60 2e-09
GSVIVT01000951001 assembled CDS 59 2e-09
GSVIVT01007965001 assembled CDS 59 2e-09
GSVIVT01032644001 assembled CDS 59 3e-09
GSVIVT01019393001 assembled CDS 58 5e-09
GSVIVT01024661001 assembled CDS 58 6e-09
GSVIVT01025065001 assembled CDS 57 1e-08
GSVIVT01038707001 assembled CDS 57 1e-08
GSVIVT01030628001 assembled CDS 56 1e-08
GSVIVT01025087001 assembled CDS 54 1e-07
GSVIVT01003473001 assembled CDS 47 7e-06
>GSVIVT01036037001 assembled CDS
Length = 307
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/285 (58%), Positives = 198/285 (69%), Gaps = 44/285 (15%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDRHFSDV 60
CKADAAALCVTCDRDIHSANPLARRHERVPV PFYDS ++A+ K NA+N L
Sbjct: 61 CKADAAALCVTCDRDIHSANPLARRHERVPVVPFYDSAAAAA--KSNAVNLL-------- 110
Query: 61 DGDADVSREEAEAASWLLPNPPNPKVMESPDLNTGQYVFSEMEPYLDLDYGPVDPKLESQ 120
+ ES DLN+ Y+FS+++PYLDLDY +DPKL+SQ
Sbjct: 111 -------------------------LAESSDLNSSHYMFSDIDPYLDLDYPSMDPKLQSQ 145
Query: 121 EQNSS-GTDGVVPVQSKSVQTPLVNDHCFELDFSGSKAFAYGYKAQCLXXXXXXXXXXXX 179
+Q S GTDGVVPVQ+KSVQ PLVND+CF++DFSGSK+F Y Q L
Sbjct: 146 QQQQSSGTDGVVPVQNKSVQAPLVNDNCFDMDFSGSKSF---YNGQSLSQSVSSSSLEVG 202
Query: 180 XXPDGGNMVDISNPYSRSVSNGIESANQTVQLSA-VDREARVLRYREKRKNRKFEKTIRY 238
PDG MVD++NP+ RS++ G ESANQT Q+S+ +DREARVLRYREKRKNRKFEKTIRY
Sbjct: 203 VVPDGNAMVDVTNPFGRSMNTGSESANQTAQISSGIDREARVLRYREKRKNRKFEKTIRY 262
Query: 239 ASRKAYAETRPRIKGRFAKRTDTEVEVDRSSIY----GFGVVPSF 279
ASRKAYAETRPRIKGRFAKR++ EV+ S G+GVVPSF
Sbjct: 263 ASRKAYAETRPRIKGRFAKRSEIEVDYSSSGALTADSGYGVVPSF 307
>GSVIVT01036499001 assembled CDS
Length = 438
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 154/311 (49%), Gaps = 52/311 (16%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDRHFSDV 60
CKADAA+LC TCD DIHSANPLARRH RVPV P + P
Sbjct: 148 CKADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPATDPGG------------ 195
Query: 61 DGDADVSREEAEAASWLLPNPPNPKVMESPDLNTGQYVFSEMEPYLDL-DYGPVDPKLES 119
+ +E EAASWLL NP S + N G E++ YLDL +Y S
Sbjct: 196 ------TEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGEVDEYLDLVEYNSCPENQFS 249
Query: 120 QEQNSS-------------GTDGVVPVQSKSVQTPLVNDHCFE-----LDFSGSKAFAYG 161
+ N G D VVPVQ + L H + +++ SKA AY
Sbjct: 250 DQYNQQQPPPHYSVPHKNYGGDRVVPVQCGEAKGQLHQQHQQQGFHLGMEYESSKA-AYS 308
Query: 162 YKAQCLXXXXXXXXXXXXXXPDGGNMVDISNPYS--RSVSNGIE-----SANQTVQLSAV 214
Y + P+ M DIS S R I+ QL+ +
Sbjct: 309 YNPS-ISHSVSVSSMDVGVVPEATTMSDISISISHPRPPKGTIDLFSGPPIQMPTQLTPM 367
Query: 215 DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVDR------S 268
DREARVLRYREK+K RKFEKTIRYASRKAYAETRPRIKGRFAKRTD EVEVD+
Sbjct: 368 DREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQMFSTTLM 427
Query: 269 SIYGFGVVPSF 279
+ G+G+VPSF
Sbjct: 428 AESGYGIVPSF 438
>GSVIVT01029107001 assembled CDS
Length = 249
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 135/253 (53%), Gaps = 33/253 (13%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDRHFSDV 60
CKADAAALCVTCDRDIHSANPLARRH+RVPV PFYDS S A+ FL V
Sbjct: 14 CKADAAALCVTCDRDIHSANPLARRHDRVPVVPFYDSAESLVKSTAAAVGFL-------V 66
Query: 61 DGDADVSREEAEAASWLLPNPPNPKVMESPDLNTGQYVFSEMEPYLDLDYGPVDPKL-ES 119
G A E++EAASWLL PNPK+ E P++ +G+ FS+++P+LD DY D K
Sbjct: 67 PGGAG-DEEDSEAASWLL---PNPKLPEGPEVKSGEVFFSDIDPFLDFDY--PDAKFPHH 120
Query: 120 QEQNSSGTDGVVPVQSKSVQTPLVN---DHCFELDFSGSKAFAYGYKAQCLXXXXXXXXX 176
+ G DGVVPVQ+K P+ N D+CFELDFS SK AY Y AQ
Sbjct: 121 HHHHCGGNDGVVPVQAKDPSPPVTNHPADNCFELDFSRSKLSAYNYTAQ--SLSQSISSS 178
Query: 177 XXXXXPDGGNMVDISNPYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTI 236
PDG N + NG S VQ RE + RE + R +K++
Sbjct: 179 DVGVVPDGN-----CNSIDPIIWNGSRSEGVEVQ-----REEKEPEIRENHQIR-LQKSL 227
Query: 237 RYASRKAYAETRP 249
R R A RP
Sbjct: 228 R---RDASKNQRP 237
>GSVIVT01033017001 assembled CDS
Length = 195
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 203 ESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDT 261
E+ N ++L A +R +LRY+EK+K R++EK IRY SRKA A+TR R+KGRF K +D+
Sbjct: 137 ETTNVDMELLAQNRGHAMLRYKEKKKTRRYEKHIRYESRKARADTRKRVKGRFVKASDS 195
>GSVIVT01011897001 assembled CDS
Length = 432
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 188 VDISNPYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAET 247
+ + +PY G Q + REARV RYREKR+ R F K IRY RK AE
Sbjct: 352 IQVHHPYGEFGGMG----EQQAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEK 407
Query: 248 RPRIKGRFAKR 258
RPR+KGRF KR
Sbjct: 408 RPRMKGRFVKR 418
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 22/29 (75%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERV 29
C AD A LC CD +HSANPLARRHERV
Sbjct: 31 CAADDAFLCQACDMSVHSANPLARRHERV 59
>GSVIVT01030127001 assembled CDS
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 220 VLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
V+RYREK+KNRKF+K +RYASRKA A+ R R+KGRF K
Sbjct: 362 VMRYREKKKNRKFDKRVRYASRKARADVRQRVKGRFVK 399
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERV 29
C++DAA+LC++CDR +HSAN L+RRH R
Sbjct: 17 CRSDAASLCLSCDRHVHSANALSRRHSRT 45
>GSVIVT01027910001 assembled CDS
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 191 SNPYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPR 250
+ P + +S+ ES + +LS R+ ++ RY +KR R F K I+YA RK A++RPR
Sbjct: 244 TTPLASEMSSLEESTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPR 303
Query: 251 IKGRFAKRTD 260
++GRFAK D
Sbjct: 304 VRGRFAKNDD 313
>GSVIVT01010991001 assembled CDS
Length = 343
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 210 QLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
+L++ +R++ + RY+EK+K R++EK IRY SRKA AE+R RIKGRFAK
Sbjct: 293 ELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRFAK 340
>GSVIVT01027443001 assembled CDS
Length = 593
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEV 263
+ REA ++++R KRK+R FEK +RY SRK AE RPR+KG+F ++ T+
Sbjct: 538 STQREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVQTDT 588
>GSVIVT01003983001 assembled CDS
Length = 318
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
R+A VLRY+EKR++R F K IRY RK AE RPR+KGRF KR+
Sbjct: 275 RQASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 318
>GSVIVT01010855001 assembled CDS
Length = 392
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 189 DISNPYSRSVSN-GIESANQTVQLSAVD-----REARVLRYREKRKNRKFEKTIRYASRK 242
D +P+SR G ++A + Q+ REA VLRY+EKR+ R F K IRY RK
Sbjct: 308 DRGSPFSRETEFPGNDTAARLAQIDLFSECGGVREASVLRYKEKRRTRLFSKKIRYQVRK 367
Query: 243 AYAETRPRIKGRFAKRTDT 261
A+ RPR+KGRF +R ++
Sbjct: 368 VNADRRPRMKGRFVRRPNS 386
>GSVIVT01038647001 assembled CDS
Length = 747
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDT 261
++ REA + ++R KRK+R FEK +RY SRK AE RPR+KG+F ++ T
Sbjct: 557 SIQREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQFVRQVHT 605
>GSVIVT01020352001 assembled CDS
Length = 215
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 201 GIESANQTV-QLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
GIE +N V + S +R+ R+LRY +KR R F KTI+YA RK A+ R R++GRFA+ +
Sbjct: 104 GIEESNTKVGRYSVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNS 163
Query: 260 D 260
+
Sbjct: 164 E 164
>GSVIVT01000951001 assembled CDS
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTD 260
A +R +LRY+EK+K R+++K IRY SRKA A+TR R+KGRF K T+
Sbjct: 311 AQNRGNAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKATE 358
>GSVIVT01007965001 assembled CDS
Length = 533
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 204 SANQTVQLSAVDR-EARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTD 260
S++ V+L VDR EA ++++R+KRK R F+K IRY +RK AE RPR++G+F ++ +
Sbjct: 431 SSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKMN 488
>GSVIVT01032644001 assembled CDS
Length = 769
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 258
REA + ++R+KRK R FEK +RY SRK AE RPRI+G+F +R
Sbjct: 715 REAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRR 757
>GSVIVT01019393001 assembled CDS
Length = 262
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 212 SAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTE 262
SA +R+ R+ +YR KR R F KTI+YA RK A++RPR++GRFA+ + E
Sbjct: 158 SAEERKERIDKYRAKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNDEIE 208
>GSVIVT01024661001 assembled CDS
Length = 101
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
REA VLRY+EKR+ R F K IRY RK A+ RPR+KGRF KR
Sbjct: 51 REASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFVKRV 94
>GSVIVT01025065001 assembled CDS
Length = 251
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 215 DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTE 262
+++ R+ RYR KR R F K I+YA RK A++RPRI+GRFA+ + E
Sbjct: 169 EKKERIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNEEIE 216
>GSVIVT01038707001 assembled CDS
Length = 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 215 DREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEV 263
DR+ ++ RYR KR R F + I+YA RKA A+++PRI+GRFAK + ++
Sbjct: 240 DRQKKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDM 288
>GSVIVT01030628001 assembled CDS
Length = 338
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
R+ +RY EK+K R F K IRYASRKA A+TR R++GRF K
Sbjct: 282 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVRGRFVK 323
>GSVIVT01025087001 assembled CDS
Length = 103
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 201 GIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
G N+ + REA + ++R+KRK R FEK +RY SRK AE RPRI+G+F ++
Sbjct: 18 GKGGGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQN 76
>GSVIVT01003473001 assembled CDS
Length = 247
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 211 LSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTD 260
L + +R++ VLRY+EK+K RKFEK IRYASRKA A+ R R+KGRF K D
Sbjct: 185 LPSANRDSAVLRYKEKKKARKFEKKIRYASRKARADVRKRVKGRFVKAGD 234