Jatropha Genome Database

JcCB0333691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333691.10 - phase: 0 /partial
         (246 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01036171001 assembled CDS                                       339   6e-94
GSVIVT01036173001 assembled CDS                                       318   1e-87
GSVIVT01033433001 assembled CDS                                       191   2e-49
GSVIVT01013560001 assembled CDS                                       176   1e-44
GSVIVT01013561001 assembled CDS                                       173   5e-44
GSVIVT01001346001 assembled CDS                                        66   1e-11
GSVIVT01036175001 assembled CDS                                        52   4e-07
GSVIVT01030325001 assembled CDS                                        50   1e-06

>GSVIVT01036171001 assembled CDS
          Length = 490

 Score =  339 bits (870), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 156/246 (63%), Positives = 202/246 (82%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           MEL  I +FLE+K++LVTGATGFLAK+F+E++LR QPNVKKL+LLLRA DT S  QR +N
Sbjct: 1   MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           EVIGK+LF V++EK  ++ NS ++KK+  VPGD+S +DLG  DS+LREEM  ++D ++N 
Sbjct: 61  EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120

Query: 121 AATTRFDERYDVALGTNALGAKNVLCFAKNCLKLKLFIHISTAYVCGESSGLIMEKSYQL 180
           AATT FDERYDVALG NALGA++VL FAK C+K+K+ +H+STAYV GE SGLI+E+ +Q+
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180

Query: 181 GETLNGVLGLNIEEEKKLIDRKLNQLRREGATEANIKKAMIDMGTERAKAYGWPNTYVFT 240
           GETLNG  GL+IEEEKKL++ +L++L+ EGAT   +  AM D G +RAK +GWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240

Query: 241 KAMGEM 246
           KAMGEM
Sbjct: 241 KAMGEM 246


>GSVIVT01036173001 assembled CDS
          Length = 490

 Score =  318 bits (815), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 150/246 (60%), Positives = 197/246 (80%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           MEL  I +FLE+K++LVTGATGFLAK+F+EK+LR+QPNVKKL+LLLRAADT S  QR +N
Sbjct: 1   MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           EV+GK+LFRV+K+K G+NLNS I++K+  +PGD+S E+LG  + +LREE+  ++D ILN 
Sbjct: 61  EVLGKELFRVLKDKWGSNLNSFISEKVTPIPGDISCENLGVTNLNLREEIWREVDVILNL 120

Query: 121 AATTRFDERYDVALGTNALGAKNVLCFAKNCLKLKLFIHISTAYVCGESSGLIMEKSYQL 180
           AATT+FDERYDVALG N LGA +VL F+K C+KLK+ +H+STAYV GE  GLI+E   ++
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180

Query: 181 GETLNGVLGLNIEEEKKLIDRKLNQLRREGATEANIKKAMIDMGTERAKAYGWPNTYVFT 240
           G+ LNG  GL++++EKKL++  LN+L    ATE  I   M ++G +RA  YGWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240

Query: 241 KAMGEM 246
           KAMGEM
Sbjct: 241 KAMGEM 246


>GSVIVT01033433001 assembled CDS
          Length = 632

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/253 (41%), Positives = 155/253 (61%), Gaps = 19/253 (7%)

Query: 6   ITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGK 65
           I  FL  K+ L+TGATGFLAKV +EK+LR +P+V K+YLL++A +  +  +R  NE+I  
Sbjct: 146 IDNFLRGKSFLITGATGFLAKVLIEKILRTEPDVGKIYLLIKAKNQEAAMERLKNEIINA 205

Query: 66  DLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTR 125
           ++F  +++  G +  + +  K+  V GDV    LG  +    E +  ++D I+N AA T 
Sbjct: 206 EVFDCLQQAYGKSYQAFMLSKLVPVAGDVCGSSLGL-EKDFAEAIAKEVDVIVNSAANTT 264

Query: 126 FDERYDVALGTNALGAKNVLCFAKNCLKLKLFIHISTAYVCGESSGLIMEKSYQLGETLN 185
           FDERYD+A+  N  G  +++ FAKNC KLKLF+ +STAYV G+  G IMEK + +G+++ 
Sbjct: 265 FDERYDIAIDINTKGPCHLMNFAKNCKKLKLFLQVSTAYVNGQRQGRIMEKPFCIGDSIA 324

Query: 186 G-----------VLGLNIEEEKKL-IDRKLNQLRREGATEANIKKAMIDMGTERAKAYGW 233
                       +  LNIE E KL +D K      E    + + + M ++G ERAK +GW
Sbjct: 325 RESNISEAPPRLLPTLNIEAEIKLALDSK------EAFKGSTLAQKMKELGLERAKKHGW 378

Query: 234 PNTYVFTKAMGEM 246
            +TYVFTKAMGEM
Sbjct: 379 QDTYVFTKAMGEM 391


>GSVIVT01013560001 assembled CDS
          Length = 571

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/255 (39%), Positives = 154/255 (60%), Gaps = 22/255 (8%)

Query: 6   ITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGK 65
           I QFL  KT  +TGATG LAK  +EK+LR  P+V K+++L++A +  +   R   E+I  
Sbjct: 90  ILQFLAGKTYFITGATGLLAKAVVEKILRRAPDVGKIFILIKAKNKEAAVDRLKTEIINS 149

Query: 66  DLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTR 125
           +LF  +K++ G      +  K+A V G++   DLG  D++L  E+  ++D I+N AA T 
Sbjct: 150 ELFECLKQRHGKYYQDFMLSKLAPVVGNLCESDLGI-DANLISEIAEEVDVIINSAANTN 208

Query: 126 FDERYDVALGTNALGAKNVLCFAKN-CLKLKLFIHISTAYVCGESSGLIMEKSYQLGETL 184
           F+ERYDV+L  N +G   ++ FAK  C  L++F+H+STAYV GE  G+I EK + +GE++
Sbjct: 209 FEERYDVSLHANTIGPCRLMDFAKKYCKNLRVFLHVSTAYVNGEREGMITEKPFYMGESI 268

Query: 185 N-----------GVLGLNIEEEKKL-IDRKLNQLRREGATEANIK-KAMIDMGTERAKAY 231
                           L++++E K+ +D K+       A E N++ + M ++G ERA+ +
Sbjct: 269 AREKVASEFLPLSYPALDVDDEIKIALDSKV-------AFEGNLEDQKMKELGLERARIH 321

Query: 232 GWPNTYVFTKAMGEM 246
           GW N Y FTKAMGEM
Sbjct: 322 GWHNPYEFTKAMGEM 336


>GSVIVT01013561001 assembled CDS
          Length = 311

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/261 (40%), Positives = 153/261 (58%), Gaps = 25/261 (9%)

Query: 1   MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           M LE  + F E KT  +TG TGFLAK  +EK+LR  P+V K+++L++A +  +   R   
Sbjct: 1   MVLEFFSSFQE-KTYFITGGTGFLAKAVVEKILRTAPDVGKIFVLIKAKNKEAAMDRLKT 59

Query: 61  EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
           E+I  +LF  +K++ G      I  K+A V G++   DLG   +S+  E+  ++D I+N 
Sbjct: 60  EIIDSELFECLKQRHGKYYQDFILSKLAPVVGNLCESDLGIDANSI-SEIAEEVDVIINS 118

Query: 121 AATTRFDERYDVALGTNALGAKNVLCFA-KNCLKLKLFIHISTAYVCGESSGLIMEKSYQ 179
           AA T F+ERYDV+L TN LG + ++ F  K C  L++F+H+STAYV GE  G+IMEK + 
Sbjct: 119 AANTNFEERYDVSLSTNVLGPRRLMDFTNKYCKNLRVFLHVSTAYVSGEREGMIMEKPFH 178

Query: 180 LGETLN-------------GVLGLNIEEEKKLIDRKLNQLRREGATEANIK-KAMIDMGT 225
           +GE +               VL ++ E E  L D K+       A E N++ + M  +G 
Sbjct: 179 MGERIAREKAASEFPPLAYPVLDVDGEIEIAL-DSKV-------AFEGNLEDEKMKALGL 230

Query: 226 ERAKAYGWPNTYVFTKAMGEM 246
           ERA+ +GW N Y FTKAMGEM
Sbjct: 231 ERARIHGWHNPYEFTKAMGEM 251


>GSVIVT01001346001 assembled CDS
          Length = 104

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 63  IGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAA 122
           I  +LF+ +++  G +    +  K+  V GDV   +LG  D++   E+   +D I+N AA
Sbjct: 4   ICSELFKCLEQMHGESYTDFMMSKLVSVIGDVCKSNLGM-DATSATEIAKAVDVIVNSAA 62

Query: 123 TTRFDERYDVALGTNALGAKNVLCFAKNCLKLKLFIHIST 162
            T  DERYDVAL TN  G   ++ FAK   K  L +H+ST
Sbjct: 63  NTILDERYDVALNTNTKGPSRLVSFAKKYKKPSLSVHVST 102


>GSVIVT01036175001 assembled CDS
          Length = 35

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 31/35 (88%)

Query: 1  MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRV 35
          MEL  + +FLE+K++LVTGATGFLAK+F+E +LR+
Sbjct: 1  MELGSVVEFLENKSILVTGATGFLAKIFVEMILRI 35


>GSVIVT01030325001 assembled CDS
          Length = 157

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 8/58 (13%)

Query: 190 LNIEEEKKL-IDRKLNQLRREGATEANIKKAMIDMGTERAKAYGWPNTYVFTKAMGEM 246
           L++E E KL +D +L         +  + + M ++G ERA+ YGW +TYVFTKAMGEM
Sbjct: 54  LDVEAENKLALDSRL-------VVDHAVAQKMKELGLERARIYGWQDTYVFTKAMGEM 104