Jatropha Genome Database
- JcCB0332771.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0332771.10 + phase: 0 /partial
(204 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01000217001 assembled CDS 293 4e-80
GSVIVT01038740001 assembled CDS 74 4e-14
GSVIVT01035474001 assembled CDS 66 1e-11
GSVIVT01010896001 assembled CDS 63 9e-11
GSVIVT01019769001 assembled CDS 50 8e-07
GSVIVT01025299001 assembled CDS 47 5e-06
>GSVIVT01000217001 assembled CDS
Length = 829
Score = 293 bits (750), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 165/204 (80%)
Query: 1 IYRALGLMVAASPCXXXXXXXXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
+YRALGLMVAASPC IS+CARKGILLKGG VLDALASCHTIAFDKTGTL
Sbjct: 403 VYRALGLMVAASPCALAVAPLAYAIAISACARKGILLKGGHVLDALASCHTIAFDKTGTL 462
Query: 61 TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS 120
T+G L FKAIEPIYGH V + SCC P+CE EALAVAAAME+GTTHPIGRAVVDH
Sbjct: 463 TSGKLTFKAIEPIYGHGVRAYRSKFVSCCIPSCEIEALAVAAAMERGTTHPIGRAVVDHC 522
Query: 121 IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFITSRCKSEAESRK 180
+GKDLP V+VENFE PGRGL+ATL ++ESG G +LLKAS+GS+E+I S CKSE E +K
Sbjct: 523 VGKDLPPVAVENFESLPGRGLSATLTSIESGIGGGELLKASIGSLEYILSLCKSEDELKK 582
Query: 181 IKEAVNASSYGSDLVHAALSVDEK 204
IKEA++ SSYGSD VHAALSV++K
Sbjct: 583 IKEAMSTSSYGSDFVHAALSVNKK 606
>GSVIVT01038740001 assembled CDS
Length = 443
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 46/200 (23%)
Query: 7 LMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 65
++V A PC +S A KG+LL+GG +L+ + +TI FDKTGTLT G
Sbjct: 31 VLVVACPCALGLATPTAILVGTSLGATKGLLLRGGNILEKFSEMNTIVFDKTGTLTIG-- 88
Query: 66 MFKAIEPIYGHKVGKKHADVTSCCTPNCEK---------------EALAVAAAMEKGTTH 110
P+ VT TP CEK E L +AA +E T H
Sbjct: 89 -----RPV-----------VTKVVTPGCEKDTDSRKSSKSIWSEVEVLKLAAGVESNTIH 132
Query: 111 PIGRAVVDHSIGKDLPCVSVEN--FEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFI 168
P+G+A+V+ + + V V + F PG G AT+ N K S+G+ +++
Sbjct: 133 PVGKAIVEAARAVNCQNVKVVDGTFVEEPGSGAVATVENK----------KVSVGTFDWV 182
Query: 169 TSRCKSEAESRKIKEAVNAS 188
E +++ E N S
Sbjct: 183 QRHGVQENPFQEVDELKNQS 202
>GSVIVT01035474001 assembled CDS
Length = 888
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 21/131 (16%)
Query: 31 ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHKVGKKHADVTSCCT 90
A++G+L++GG VL+ LAS +AFDKTGTLT G A+ +
Sbjct: 530 AKQGLLIRGGDVLERLASVDHVAFDKTGTLTKGKPAVSAVASLAYE-------------- 575
Query: 91 PNCEKEALAVAAAMEKGTTHPIGRAVVD--HSIGKDLPCVSVENFEYFPGRGLTATLNNM 148
E+E L +AAA+EK HPI +A+V+ S+ +P + + E PG G A ++
Sbjct: 576 ---EQEILRIAAAVEKTAVHPIAKAIVNKAESLNLTIPITTAQLVE--PGFGSLAEVDGR 630
Query: 149 ESGAGSIKLLK 159
GS++ ++
Sbjct: 631 LVAVGSLEWVQ 641
>GSVIVT01010896001 assembled CDS
Length = 718
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 2 YRALGLMVAASPCXXXXXXXXXXX-XISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
+ +L ++V+A PC +S A G+L+KGG+ L+ LA +AFDKTGT+
Sbjct: 337 HLSLVVLVSACPCALILSTPVATFCALSKAAVSGLLIKGGEYLEILAKIRIMAFDKTGTI 396
Query: 61 TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS 120
T G + K + + DV+S L +++E ++HP+ A+ D+
Sbjct: 397 TRGEFVVKDFQSL--------RDDVSS-------DTLLYWVSSIESKSSHPMAAALFDYG 441
Query: 121 IGKDLPCV--SVENFEYFPGRGLTATLNNMESGAGSIKL 157
+ + + +VE F+ FPG G+ ++ + G+ K+
Sbjct: 442 LSQSVEPKPENVEEFQNFPGEGIHGKIDGKDIYVGNRKI 480
>GSVIVT01019769001 assembled CDS
Length = 1902
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)
Query: 5 LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
+ +MV A PC + A +G+L+KGGQ L++ I FDKTGTLT
Sbjct: 850 ISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVDCIVFDKTGTLT-- 907
Query: 64 GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS--- 120
VGK T +E + AA E + HP+ +A+V+++
Sbjct: 908 --------------VGKPVVVSTRLLKNMVLQEFYELIAAAEVNSEHPLAKAIVEYAKKF 953
Query: 121 --IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLL 158
G+ +F G G+ A + N E G+ L+
Sbjct: 954 REDGESPTWPEARDFVSITGHGVKAIVRNKEIIVGNKSLM 993
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 5 LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
+ +MV A PC + A +G+L+KGGQ L++ + I FDKTGTLT
Sbjct: 1519 ISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLT-- 1576
Query: 64 GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIG- 122
VGK T +E + AA E + HP+ +A+V+++
Sbjct: 1577 --------------VGKPVVVNTRLWKNMVLQEFYELVAATEVNSEHPLAKAIVEYAKKF 1622
Query: 123 ----KDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLL 158
++ ++F G G+ A + N E G+ L+
Sbjct: 1623 REDEENPTWPEAKDFVSITGHGVKAIVRNKEIIVGNKSLM 1662
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 5 LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
+ +MV A PC + A +G+L+KGGQ L++ + I FDKTGTLT
Sbjct: 113 ISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLT-- 170
Query: 64 GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIG- 122
VGK T +E + AA E + HP+ +A+V+++
Sbjct: 171 --------------VGKPVVVNTRLLKNMALQEFYELVAATEVNSEHPLAKAIVEYAKKF 216
Query: 123 ----KDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFITSRCKSEAES 178
++ ++F G G+ A + N E G+ L+ ++ F +E E+
Sbjct: 217 REDEENPTWPEAKDFVSITGNGVKAIVRNKEIIVGNKSLMLDQNIAIPFEAEDMLAETEA 276
>GSVIVT01025299001 assembled CDS
Length = 850
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 4 ALGLMVAASPCXXXXXXXXXXXXIS-SCARKGILLKGGQVLDALASCHTIAFDKTGTLTT 62
A+ ++V A PC + A G+L+KGG L+ TI FDKTGTLT
Sbjct: 462 AISVLVVACPCALGLATPTAVMVATGKGASLGVLIKGGNALEKAHKVKTIVFDKTGTLTV 521
Query: 63 GGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS-- 120
G +P+ V + C + A E + HP+ +AVV+++
Sbjct: 522 G-------KPVVVSAVLFSSFSMEEFCD---------MTTAAEANSEHPLAKAVVEYAKR 565
Query: 121 ----IGKDLPCVS-VENFEYFPGRGLTATLNNMESGAGSIKLLKAS 161
G ++ ++ FE PG G++ + + G+ +L++ S
Sbjct: 566 LRQKFGPQTEQMTDIKEFEVHPGAGVSGKVGDKLVLVGNKRLMQDS 611