Jatropha Genome Database
- JcCB0331501.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0331501.10 + phase: 0 /partial
(84 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01027577001 assembled CDS 147 1e-36
GSVIVT01018450001 assembled CDS 105 6e-24
GSVIVT01036551001 assembled CDS 83 3e-17
GSVIVT01010521001 assembled CDS 79 6e-16
GSVIVT01012249001 assembled CDS 75 4e-15
GSVIVT01008139001 assembled CDS 75 6e-15
GSVIVT01012250001 assembled CDS 73 3e-14
GSVIVT01008140001 assembled CDS 69 6e-13
GSVIVT01036549001 assembled CDS 65 8e-12
GSVIVT01000802001 assembled CDS 55 9e-09
GSVIVT01025945001 assembled CDS 54 2e-08
GSVIVT01021303001 assembled CDS 53 3e-08
GSVIVT01027579001 assembled CDS 52 6e-08
GSVIVT01038474001 assembled CDS 52 7e-08
GSVIVT01009219001 assembled CDS 51 1e-07
GSVIVT01003861001 assembled CDS 51 1e-07
GSVIVT01003864001 assembled CDS 49 6e-07
GSVIVT01018839001 assembled CDS 45 1e-05
GSVIVT01008560001 assembled CDS 45 1e-05
>GSVIVT01027577001 assembled CDS
Length = 244
Score = 147 bits (371), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 78/84 (92%)
Query: 1 TTKTLERYQRCCFTPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
TTKTLERYQR C+TPQDN++E ETQSWYQEV+KLKAKYESLQRTQRHLLGEDLGPLSVKE
Sbjct: 62 TTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVKE 121
Query: 61 LQNLEKQLEGALALARQRKVFICL 84
LQNLEKQLEGALA ARQRK + +
Sbjct: 122 LQNLEKQLEGALAQARQRKTQMMI 145
>GSVIVT01018450001 assembled CDS
Length = 249
Score = 105 bits (261), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 2 TKTLERYQRCCFTPQDNS-IERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
TKT+ERY+RCC+ +DN+ E + Q ++E +KLKAKYESL +QRHLLGEDLG LS+KE
Sbjct: 63 TKTIERYRRCCYASRDNNDAEHDRQIGHEEYSKLKAKYESLMDSQRHLLGEDLGLLSIKE 122
Query: 61 LQNLEKQLEGALALARQRKVFICL 84
LQNLEK LEG L+ ARQRK + L
Sbjct: 123 LQNLEKMLEGTLSQARQRKAQMML 146
>GSVIVT01036551001 assembled CDS
Length = 243
Score = 82.8 bits (203), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 3 KTLERYQRCCFTPQDNS-IERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
KTLERYQ+C + + S +E +S Y+E KLK+K+ESLQRTQR+LLGEDLGPL+ KEL
Sbjct: 65 KTLERYQKCSYGAVEVSRPSKELESSYREYLKLKSKFESLQRTQRNLLGEDLGPLNTKEL 124
Query: 62 QNLEKQLEGALALARQRKVFICL 84
+ LE+QLE +L R K L
Sbjct: 125 EQLERQLETSLKQVRSTKTQFML 147
>GSVIVT01010521001 assembled CDS
Length = 242
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 3 KTLERYQRCCF-TPQDNSIERETQ--SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVK 59
KTLERYQ+C + P+ N RE S QE KLKA+YE+LQR+QR+LLGEDLGPLS K
Sbjct: 65 KTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLSTK 124
Query: 60 ELQNLEKQLEGALALAR 76
EL++LE+QL+ +L R
Sbjct: 125 ELESLERQLDVSLKQIR 141
>GSVIVT01012249001 assembled CDS
Length = 243
Score = 75.5 bits (184), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 3 KTLERYQRCCFTPQDNS-IERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
+TLERYQRC ++ + S +ETQ+ YQE KLK+K E LQRTQR+ LGEDLG L KEL
Sbjct: 65 ETLERYQRCSYSALEASQPAKETQNSYQEYLKLKSKVEVLQRTQRNFLGEDLGHLGTKEL 124
Query: 62 QNLEKQLEGALALARQRKVFICL 84
+ LE QL+ +L R K L
Sbjct: 125 EQLEHQLDKSLKQIRSTKTQFML 147
>GSVIVT01008139001 assembled CDS
Length = 246
Score = 75.1 bits (183), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 2 TKTLERYQRCCFTPQDNS--IERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVK 59
KTLE+YQ+C + + S + TQS YQE KLK + E LQR+QRHLLGEDL PL+ K
Sbjct: 64 AKTLEKYQKCSYGALEASQPVYELTQSSYQEYLKLKTRVEVLQRSQRHLLGEDLDPLNTK 123
Query: 60 ELQNLEKQLEGALALARQRKV 80
EL+ LE QLE +L R K
Sbjct: 124 ELEQLEHQLEMSLKQIRSTKT 144
>GSVIVT01012250001 assembled CDS
Length = 241
Score = 72.8 bits (177), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 3 KTLERYQRCCFTP-QDNSIERETQ-SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
K L+RY+R + Q + + E+Q +W E +KLKAK E LQR+QRH LGEDL LS+KE
Sbjct: 65 KILDRYERYSYAERQLTATDPESQGNWSLEYSKLKAKIELLQRSQRHFLGEDLDSLSLKE 124
Query: 61 LQNLEKQLEGALALARQRK 79
LQNLE+QL+ AL R RK
Sbjct: 125 LQNLEQQLDTALKHIRSRK 143
>GSVIVT01008140001 assembled CDS
Length = 243
Score = 68.6 bits (166), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 3 KTLERYQRCCFT-PQDNSIERETQ-SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
+ LERY+R + Q + + E+Q SW E AKLKA+ E LQ++QR+ +GEDL LS+KE
Sbjct: 65 RILERYERYAYAQSQLIATDLESQGSWTLEYAKLKARMEVLQKSQRNFMGEDLDSLSLKE 124
Query: 61 LQNLEKQLEGALALARQRK 79
LQNLE+QL+ +L R RK
Sbjct: 125 LQNLEQQLDNSLKSTRTRK 143
>GSVIVT01036549001 assembled CDS
Length = 247
Score = 64.7 bits (156), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 3 KTLERYQRCCFTP-QDNSIERETQ-SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
+ LERY+R + Q S + + Q +W + KL A+ E LQR RH +GEDL PLS++E
Sbjct: 65 RILERYERYSLSERQLLSTDPDPQGNWSMDYPKLTARIEVLQRNLRHFVGEDLDPLSLRE 124
Query: 61 LQNLEKQLEGALALARQRK 79
LQNLE+QL+ AL R RK
Sbjct: 125 LQNLEQQLDTALKRIRTRK 143
>GSVIVT01000802001 assembled CDS
Length = 363
Score = 54.7 bits (130), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 4 TLERYQRCCFTPQDNSI--ERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
T+ERY++ C + E Q + QE +KL+ + +Q RH+LGE L L+ KEL
Sbjct: 154 TIERYKKVCSDSSNTGSVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSLNFKEL 213
Query: 62 QNLEKQLEGALALARQRK 79
+NLE +LE ++ R +K
Sbjct: 214 KNLETRLEKGISRIRSKK 231
>GSVIVT01025945001 assembled CDS
Length = 233
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 4 TLERYQRCCF--TPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
T++RY++ T +++E Q + QE AKL+ + + LQ + RHL+G+ L L+VKEL
Sbjct: 65 TIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLTVKEL 124
Query: 62 QNLEKQLEGALALARQRK 79
+ LE +LE + R +K
Sbjct: 125 KQLENRLERGITRIRSKK 142
>GSVIVT01021303001 assembled CDS
Length = 226
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 4 TLERYQRCCFTPQDNSI--ERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
T+ERY++ + E Q + QE +KL + +LQ + RH+LGE LG L+ K+L
Sbjct: 65 TIERYKKASADSSNTGSVSEANAQFYQQESSKLHQQIRNLQNSNRHMLGESLGSLNFKDL 124
Query: 62 QNLEKQLEGALALARQRK 79
++LE +LE ++ R RK
Sbjct: 125 KSLEIRLEKGISRIRSRK 142
>GSVIVT01027579001 assembled CDS
Length = 218
Score = 52.0 bits (123), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 4 TLERYQRCCFTPQDN---SIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
T+ERYQR N + E Q E A + K E L+ ++R LLGE LG S++E
Sbjct: 65 TIERYQRHTKDVHTNNYKTTEHNMQHLKHEAANMAKKIELLEISKRKLLGEGLGSCSIEE 124
Query: 61 LQNLEKQLEGALALARQRK 79
LQ +E+QLE +++ R RK
Sbjct: 125 LQQIEQQLERSVSSIRARK 143
>GSVIVT01038474001 assembled CDS
Length = 237
Score = 51.6 bits (122), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 23 ETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRK 79
E + W +E A L+ + + LQ T R LLGE+L L +K+LQNLE QLE +L R +K
Sbjct: 85 EVKLWQREAASLRQQLQYLQDTHRQLLGEELSGLGIKDLQNLENQLEMSLKGVRMKK 141
>GSVIVT01009219001 assembled CDS
Length = 240
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 23 ETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKVFI 82
E + W +E A L+ + + LQ R ++GE+L LSVK+LQNLE QLE +L R +K I
Sbjct: 85 EVKFWQREAAMLRQQLQHLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQI 144
Query: 83 CL 84
+
Sbjct: 145 LI 146
>GSVIVT01003861001 assembled CDS
Length = 224
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 23 ETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRK 79
E + W +E A L+ + ++LQ R L+GE+L LSVK+LQNLE QLE +L R +K
Sbjct: 85 EVKFWQREAAILRQQLQNLQENHRQLMGEELYGLSVKDLQNLENQLEMSLRGVRMKK 141
>GSVIVT01003864001 assembled CDS
Length = 224
Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 23 ETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGAL 72
E + W +E A L+ + ++LQ R L+GE+L LSVK+LQNLE QLE +L
Sbjct: 85 EVKFWQREAAILRQQLQNLQENHRQLMGEELYGLSVKDLQNLENQLEMSL 134
>GSVIVT01018839001 assembled CDS
Length = 179
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 29 QEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKVFIC 83
+ + KLK L+R R +GEDLG LS+++L+ LE++++ +L L R+RK +
Sbjct: 43 ENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLRGLEQKMDASLGLVRERKYHVI 97
>GSVIVT01008560001 assembled CDS
Length = 235
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 3 KTLERYQRCCFTPQDNSIERE--TQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
+++ RY+ + N+ +R + W E+ L+ ++L+ +HL GEDL L +KE
Sbjct: 64 RSIARYRNEVGLMEFNNYQRSRTIEFWMSEIDNLRRTIDTLEAKHKHLAGEDLSTLGMKE 123
Query: 61 LQNLEKQLEGALALARQRK 79
L+ LE+QL+ + R +K
Sbjct: 124 LKQLERQLKNGVERIRAKK 142