Jatropha Genome Database

JcCB0297891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0297891.10 + phase: 0 
         (208 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01022705001 assembled CDS                                       291   1e-79
GSVIVT01022714001 assembled CDS                                       290   3e-79
GSVIVT01011519001 assembled CDS                                       288   9e-79
GSVIVT01022702001 assembled CDS                                       288   2e-78
GSVIVT01022712001 assembled CDS                                       287   3e-78
GSVIVT01022723001 assembled CDS                                       286   6e-78
GSVIVT01022715001 assembled CDS                                       286   6e-78
GSVIVT01022699001 assembled CDS                                       281   2e-76
GSVIVT01022721001 assembled CDS                                       247   3e-66
GSVIVT01022690001 assembled CDS                                       243   6e-65
GSVIVT01036074001 assembled CDS                                       188   1e-48
GSVIVT01035444001 assembled CDS                                        53   1e-07
GSVIVT01036111001 assembled CDS                                        52   2e-07
GSVIVT01032636001 assembled CDS                                        52   2e-07

>GSVIVT01022705001 assembled CDS
          Length = 334

 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 138/178 (77%), Positives = 153/178 (85%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS+VFYDT ATLDKAER L EAA  GSQLVVFPE+F+GGYPRG NF      +
Sbjct: 5   VRATVVQASSVFYDTPATLDKAERFLKEAAALGSQLVVFPESFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV+GVIERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVIGVIERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+VWGFGD ST PV DTP GK+G  ICWENRMPLLRTAMYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTPYGKLGSVICWENRMPLLRTAMYGKG 178


>GSVIVT01022714001 assembled CDS
          Length = 329

 Score =  290 bits (742), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 137/178 (76%), Positives = 152/178 (85%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      R
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----R 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KY++YLV GVIER+GYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYRVYLVTGVIEREGYTLYCTVLFFDPKG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+VWGFGD ST PV DTP GK+G  ICWENRMPLLRTAMYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTPYGKLGSVICWENRMPLLRTAMYGKG 178


>GSVIVT01011519001 assembled CDS
          Length = 328

 Score =  288 bits (738), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 136/178 (76%), Positives = 153/178 (85%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++F+DT ATLDKAE+LL EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFFDTPATLDKAEKLLKEAAALGSQLVVFPEAFIGGYPRGHNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+Y+V GVIERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMARKYKVYIVTGVIERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+VWGFGD ST PV DTP GK+G  ICWENRMPLLRTAMYGKG
Sbjct: 121 NYLGKHRKLMPTYRERLVWGFGDCSTTPVYDTPYGKLGSVICWENRMPLLRTAMYGKG 178


>GSVIVT01022702001 assembled CDS
          Length = 329

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 135/178 (75%), Positives = 150/178 (84%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV GV+ERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVTGVVERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+ WGFGD ST PV DTP GK+G  ICWENRMPL RTAMYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKG 178


>GSVIVT01022712001 assembled CDS
          Length = 352

 Score =  287 bits (734), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 134/178 (75%), Positives = 150/178 (84%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV GV+ERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVTGVVERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+ WGFGD ST PV DTP GK+G  ICWENRMPL RT+MYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTPYGKLGSVICWENRMPLFRTSMYGKG 178


>GSVIVT01022723001 assembled CDS
          Length = 329

 Score =  286 bits (731), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 150/178 (84%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV GV+ERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVTGVVERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+ WGFGD ST P+ DTP GK+G  ICWENRMPL RT+MYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLFWGFGDCSTTPIYDTPYGKLGSVICWENRMPLFRTSMYGKG 178


>GSVIVT01022715001 assembled CDS
          Length = 329

 Score =  286 bits (731), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 150/178 (84%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV GV+ERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVTGVVERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+ WGFGD ST P+ DTP GK+G  ICWENRMPL RT+MYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLFWGFGDCSTTPIYDTPYGKLGSVICWENRMPLFRTSMYGKG 178


>GSVIVT01022699001 assembled CDS
          Length = 313

 Score =  281 bits (719), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 148/178 (83%), Gaps = 4/178 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPEAF+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPEAFIGGYPRGYNFAD----Q 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPE DRLA+MA KYK+YLV GV+ERDGYTLY T+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEADRLASMAAKYKVYLVTGVVERDGYTLYSTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            YLGKHRKLMPT  ER+ WGFGD ST PV DTP GK+G  ICWENRMPL RTAMYGKG
Sbjct: 121 NYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKG 178


>GSVIVT01022721001 assembled CDS
          Length = 169

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 116/157 (73%), Positives = 133/157 (84%), Gaps = 4/157 (2%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VRATVVQAS++FYDT ATLDKAER L EAA  GSQLVVFPE+F+GGYPRG NF      +
Sbjct: 5   VRATVVQASSIFYDTPATLDKAERFLKEAAALGSQLVVFPESFIGGYPRGYNFA----HQ 60

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQG 149
           + +G+E FRKYHASAI+VPGPEVDRLA+MA KYK+YLV+GV+ERDGYTLYCT+LFFD +G
Sbjct: 61  SPRGKESFRKYHASAINVPGPEVDRLASMAAKYKVYLVIGVVERDGYTLYCTVLFFDPEG 120

Query: 150 QYLGKHRKLMPTAMERIVWGFGDGSTIPVIDTPIGKI 186
            YLGKHRKLMPT  ER+VWGFGD ST PV DTP G +
Sbjct: 121 NYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTPYGNL 157


>GSVIVT01022690001 assembled CDS
          Length = 326

 Score =  243 bits (619), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 128/161 (79%), Gaps = 4/161 (2%)

Query: 47  TLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFRKYHASAID 106
           T DKAER L EAA   SQLVVFPEAF+GGYPRG NF      ++ +G+E F KYHASAI+
Sbjct: 19  TKDKAERFLKEAAAVESQLVVFPEAFIGGYPRGYNFAD----QSPRGKESFLKYHASAIN 74

Query: 107 VPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQGQYLGKHRKLMPTAMERI 166
           VPG EVDRLA+MA KYK+YLV GV+ RDGYTLYCT+LFFD +G YLGKHRKL+PT  ER+
Sbjct: 75  VPGSEVDRLASMAAKYKVYLVTGVVVRDGYTLYCTVLFFDPEGNYLGKHRKLVPTYWERL 134

Query: 167 VWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            WGF D ST PV DTP GK+G  ICWENRMPL RTAMYGKG
Sbjct: 135 FWGFADCSTTPVYDTPYGKLGSVICWENRMPLFRTAMYGKG 175


>GSVIVT01036074001 assembled CDS
          Length = 120

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/104 (87%), Positives = 99/104 (95%)

Query: 21  MGGDSSAPIVRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGS 80
           MG DSSAP VRATVVQASTVFYDT ATLDKAERLLAEA+ +GSQLVVFPEAF+GGYPRGS
Sbjct: 1   MGADSSAPTVRATVVQASTVFYDTPATLDKAERLLAEASSYGSQLVVFPEAFIGGYPRGS 60

Query: 81  NFGVSIGFRTSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKL 124
           NFGV+IG RT+KGRE+FRKYHA+AIDVPGPEVDRLAAMAGKYK+
Sbjct: 61  NFGVTIGNRTAKGREDFRKYHAAAIDVPGPEVDRLAAMAGKYKV 104


>GSVIVT01035444001 assembled CDS
          Length = 307

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 32/182 (17%)

Query: 39  TVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFR 98
           +V  D    +  A + + EA   G+QLV+ PE +   Y   S F V              
Sbjct: 34  SVTADKERNIAHARKAIEEAVEKGAQLVLLPEIWNSPYSNDS-FPV-------------- 78

Query: 99  KYHASAIDV---PGPEVDRLAAMAGKYKLYLVMGVI-ERDGYTLYCTILFFDSQGQYLGK 154
             +A  ID      P    L+ ++   K+ +V G I ER G  LY T   F S G+   K
Sbjct: 79  --YAEDIDAGSDASPSTAMLSEVSHALKITIVGGSIPERCGDQLYNTCCVFGSDGKLKAK 136

Query: 155 HRKL------MP---TAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYG 205
           HRK+      +P   T ME      G   TI  +DT +G+IG  IC++ R   L      
Sbjct: 137 HRKIHLFDINIPGKITFMESKTLTAGGSPTI--VDTEVGRIGIGICYDIRFSELAMLYAA 194

Query: 206 KG 207
           +G
Sbjct: 195 RG 196


>GSVIVT01036111001 assembled CDS
          Length = 297

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 19/169 (11%)

Query: 43  DTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFRKYHA 102
           D    L+ AERL+ +A   G+ +++  E F G Y                 RE+F  +  
Sbjct: 19  DVPTNLNTAERLVRDAHRKGANIILIQELFEGYY------------FCQAQREDF--FQR 64

Query: 103 SAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYCTILFFDSQGQYLGKHRKLM--- 159
           +      P + R+  +A +  + + +   E      Y +I   D+ G  LG +RK     
Sbjct: 65  AKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIAIVDADGTDLGIYRKSHIPD 124

Query: 160 -PTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYGKG 207
            P   E+  +  GD +   V +T   KIG AICW+   P    AM  +G
Sbjct: 125 GPGYQEKFYFNPGD-TGFKVFETKFAKIGVAICWDQWFPEAARAMVLQG 172


>GSVIVT01032636001 assembled CDS
          Length = 282

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 29/180 (16%)

Query: 30  VRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFR 89
           VR   VQ ++V  D AA      RL+ EA   G++ + FPE F               F 
Sbjct: 5   VRVAAVQMTSV-NDLAANFATCSRLVKEAVSAGAKFICFPENF--------------SFV 49

Query: 90  TSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIE---RDGYTLYCTILFFD 146
            +K  E        A  + GP +    ++A + K++L +G  +   +D   L  T +  D
Sbjct: 50  ATKDGESL----TIAEPLDGPIMQGYRSLARESKIWLSLGGFQEKGQDDAHLCNTHVLID 105

Query: 147 SQGQYLGKHRKL------MPTAMERIVWGFGDG-STIPVIDTPIGKIGGAICWENRMPLL 199
             G    K+RK+      +P         F +G   +  +D+PIG++G  +C++ R P L
Sbjct: 106 DTGNIRSKYRKIHLFDVDVPGGAVYKESSFTEGGKEVVAVDSPIGRLGVTVCYDLRFPEL 165